Oncorhynchus mykiss (rainbow trout): 110536172
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Entry
110536172 CDS
T07259
Name
(RefSeq) synaptic vesicle glycoprotein 2C isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110536172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110536172
Transporters [BR:
omy02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
110536172
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
LD_SV2
Sugar_tr
MFS_2
Pentapeptide_3
Pentapeptide_4
Pentapeptide
DUF6077
Motif
Other DBs
NCBI-GeneID:
110536172
NCBI-ProteinID:
XP_036791944
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All DBs
Position
11:61838597..61916301
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AA seq
737 aa
AA seq
DB search
MDDSYDNRTSLVKGAKEIAKEAKRHAVKKVNKVVDSATDEYSQRKYSRFEDEVDEGDDFY
HNPLRQDGGYNDNDQASDASDATEGHDDEDEIYEGEYQGIPAAGDRKAREGQVALGQPVT
DSLRERKELEKERQADEEELAQQYELIIQECGHGRFQWQLFLVLGLALMSDGVEVFVVGF
VLPSAETDMCALGGSNSRSGWLGSIVYLGMMVGAFFWGGMSDKMGRRQCLLICMCVNGFF
AFLSSFVQGYGMFLLCRVIAGFGTGGVVPIVFSFFAEVLSREKRGEHLSWLCMFWMIGEI
YASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCAVVALTFMPESPRFYLEVG
KHDEAWMILKQIHDTNMRARGQPEKVFTVNRIKIPKHLDELVEMKSESGNAVSKALFRSK
TELRGILVNFMKCFDYPLKENTIKLAIVWFTLSFGYYGLSVWFPDVIKHLQADDYASKVK
IHSNERIEDFTFNFTLENQIHTNGVFISDRFLNMKLKSVTFIDSTFRNCYFDDVTSVGSY
FRNCTFIEAFFYNTDIDESKLIDGTEVINSSFHHNKTGCQMTFDDDYSAYWVYFINFLGT
LAVLPGNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLSISA
WNSLDVVTTESFPTDRRGTGFGFCNALCKLAAVLGNVIFGSLVGITKAIPILLASSVLVC
GGLVGLRLPDTRANVLM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagctacgataacaggacttccttagtgaagggggccaaggaaattgccaag
gaggccaagcggcacgccgtgaaaaaggtcaacaaggtcgtggacagcgccacagacgag
tactcccagcgcaaatacagccggtttgaggacgaggtagacgagggggacgacttttac
cataatcccctgaggcaggatggaggctacaatgacaatgaccaggccagtgatgccagc
gatgccacagagggccatgatgacgaagatgagatttacgagggggagtaccaggggatc
ccagcggctggagacaggaaggccagggaggggcaggtggctctggggcagcccgtcaca
gacagcctgagagaacgtaaggagctggagaaggagaggcaggcggacgaggaagaactg
gcccagcagtatgagctgatcatccaggagtgtggccacggcaggttccagtggcagctg
ttcctggtgctgggcctggccctcatgtcggatggggtggaggtgttcgtggtggggttc
gttctgcccagcgccgagacggacatgtgtgctctgggtggctccaactccagatctgga
tggctaggcagtattgtgtacctggggatgatggtgggggcatttttctgggggggaatg
tcagacaagatgggccgcagacagtgtctgctcatctgcatgtgtgtgaacggcttcttc
gccttcctgtcctccttcgttcagggctacggcatgttcctgctctgccgcgtgatcgca
ggctttggaacagggggggttgtgcctatagtcttctccttttttgcggaggtgctgtcc
agagagaagagaggggagcacctgagctggctgtgcatgttctggatgattggagagatc
tatgcttcagccatggcctgggccattataccacactacggctggagtttcagtatgggt
tcggcctaccagttccatagttggagggtgtttgtggtggtctgcgccctgccctgtgtc
tgtgctgtggtggctctcacctttatgcccgagagccccaggttttacctggaggtgggg
aagcatgacgaggcttggatgatcctcaaacagatccatgacaccaacatgcgagcgcgt
gggcagccggagaaagtcttcaccgtgaacagaatcaagatccccaagcatctggatgag
ctggtggagatgaagtcagagtcggggaacgcagtctccaaggccctcttcaggtcaaag
acagagctacgtgggatcttggttaactttatgaagtgttttgactaccctctgaaagaa
aacactatcaagctggctattgtgtggtttacactgtcctttgggtactacggcctgtct
gtgtggttccctgacgtcatcaagcatcttcaggcagacgactacgcctccaaggtgaag
atccacagcaacgaacgcatcgaggacttcaccttcaacttcaccctggagaaccagatc
cacaccaacggggtcttcattagcgacagatttcttaatatgaagttgaagtccgtcacc
ttcattgactccaccttccgtaactgctactttgacgacgtgacgtccgtgggatcctac
ttccggaactgtaccttcatcgaggcgttcttctacaacactgacatcgatgaatcaaaa
ctgatagacggcacagaggtgatcaacagctcgttccaccacaacaagacgggctgtcag
atgacatttgacgacgactacagcgcctactgggtctactttatcaacttcctgggaact
ctagctgttctacccggcaacattgtttctgcactgctcatggataagattggacgcctt
tcaatgttaggtggctccatggttctgtcagggatcagttgtttcttcctgtggttcggc
accagtgagtcgatgatgatcttcatgctgtgcctttacaacggcctgagcatatcagcc
tggaactcactggacgtggtcaccacagagtccttccctacagacaggagagggaccggt
tttgggttctgtaatgctctgtgtaagttagctgccgtgttggggaatgtgatctttggt
tcgctggttggcatcaccaaggccatccccatcctcctggcctcatctgtgctggtgtgt
ggaggtctggtggggctccggctgcctgatactcgggccaacgtcctcatgtag
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