Oncorhynchus mykiss (rainbow trout): 110536197
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Entry
110536197 CDS
T07259
Symbol
cldn5a
Name
(RefSeq) claudin-4
KO
K06087
claudin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03272
Virion - Hepatitis viruses
omy04382
Cornified envelope formation
omy04514
Cell adhesion molecule (CAM) interaction
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
110536197 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110536197 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110536197 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110536197 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110536197 (cldn5a)
04147 Exosome [BR:
omy04147
]
110536197 (cldn5a)
Cilium and associated proteins [BR:
omy03037
]
Other cilia and associated proteins
Stereociliary proteins
110536197 (cldn5a)
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
110536197 (cldn5a)
Exosomal proteins of colorectal cancer cells
110536197 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF1582
MFS_MOT1
Clc-like
Motif
Other DBs
NCBI-GeneID:
110536197
NCBI-ProteinID:
XP_021477495
Ensembl:
ENSOMYG00000012357
UniProt:
A0A8C7VIV3
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All DBs
Position
11:complement(62555035..62557142)
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AA seq
217 aa
AA seq
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MVSAGLEILGLGLCVIGSLLVMVVCGLPMWKVTAFIEANIVVAQTIWDGLWMSCVVQSTG
QMQCKVHDSVLALGHDLQAARALTVISCVFGVLGLMVVIAGAQCTNCISAENVKTRVVNA
GGVIYITSGLFVLVPLCWMANNIISDFYNPQVPASKKREIGAALYIGWAATALLLIGGAL
LCCSCPSDGNSGYSAKYSPTKRATPNGTGDYDKRNYV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgctggactggagatccttgggctggggctgtgcgtcattggctcgctcctg
gtgatggtggtgtgcgggctgcccatgtggaaggtaacggcgttcatcgaggccaacatt
gtggtggctcagaccatctgggatgggctctggatgtcttgtgtggtgcagagcaccggc
cagatgcagtgcaaggtgcacgactcggtccttgcgctcggccacgacctgcaggcggcg
cgagccctcaccgtcatctcgtgtgtgtttggcgtgctggggctgatggtggtgatcgcc
ggggcgcagtgcaccaactgcattagcgccgagaacgtcaaaacccgggtggtaaacgcc
ggaggggtcatctacatcaccagtgggttgtttgtgttagttcccctctgctggatggcc
aacaacatcatctctgacttctacaacccacaggtgcctgcgtccaaaaagagggagatc
ggggccgcgctctacatcggttgggcggccacggcgctcctgctgatcgggggcgcgcta
ctctgctgctcttgtccttctgacgggaattcgggctattcggccaaatattccccgacc
aaacgggccacaccgaacgggaccggagactatgacaaaaggaattacgtgtag
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integrated database retrieval system