Oncorhynchus mykiss (rainbow trout): 110536287
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Entry
110536287 CDS
T07259
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110536287
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110536287
Membrane trafficking [BR:
omy04131
]
Protein recycling
Others
Others
110536287
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
110536287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
SNX17-31_F2_FERM
PDZ_2
SNX17_FERM_C
VirE3
USP7_C2
DarA_N
Motif
Other DBs
NCBI-GeneID:
110536287
NCBI-ProteinID:
XP_036795577
UniProt:
A0A8K9XBG1
LinkDB
All DBs
Position
2:17027771..17055189
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AA seq
570 aa
AA seq
DB search
MADIEGEGIHSVAPPLVQPPSRNCSGVSPTQGTGSCQTVTTVTSGPRLVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNSVNVEGATHK
QVVDLIRAGERELMLAVLSVPPQEADCLDPGDDGSAQSCYDYSDKQAVPISVPTYKHAEL
NQERFVMYNVYMAGRQLCSKRYREFAILNQNLKREFANYTFPKIPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDVMQEFLSDESDENYNGVSDVELRIAMPDKTTVTVRVRKN
CTTDQVYQAVVMTVGMDSITASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTC
LTLRKWLFTTEEEILLNDNQLAVSYCFHQAVDDVKRGFIKAEEKSYQLQKLAEQKKMAMY
LSMLRGCEGYNEIIFPHCSCDSRRKGHVVTAISIHHFKLHACTEEGTLENQVIVFEWVEM
QHWDTDEEGMAFCFQYARAEKKPRWVKIFTPYFNYLHECVERVFCELKWKKEVEEEAVDK
DNKNCSKEDYLPAVETQKGWRHLGGEIITS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcagacatcgagggagagggaattcattcggtggcacctccgttagttcagccaccc
tctcgtaactgctccggtgtcagcccaacgcagggcaccggcagttgccaaacggtgact
actgttacgtcaggcccgcgactggtgcggatagtcaagtctgactcgggatatggcttc
aatgtccggggacaggttagcgaaggaggacaactacggagcatcaacggggaattgtat
gccccgctacagcatgttagtgctgttttaccgggaggtgcagcggacagagccggtatc
tcgaaaggggaccggattctggaagttaatagtgtgaacgtggagggggcgacccataag
caggtggtggatctgatccgtgcgggggagagggagctgatgctggccgtgctgtctgta
cctccccaggaggctgactgtctggaccctggagacgacggctcagcccagtcctgctac
gactacagcgacaaacaggccgtccccatctccgtccccacatacaaacacgctgaactc
aaccaggagaggtttgtgatgtataatgtgtacatggcaggcagacagctgtgctctaag
aggtacagggagtttgctatcctcaaccagaacctgaagagagagtttgccaactacacc
ttccccaaaatacctggcaaatggcctttttccctgtctgaacaacaactagacgctaga
cgcaggggactggaggaatacctggagaaagtgtgttcagtgagggtgattggggagagt
gatgtcatgcaggagtttctgtctgacgagtctgatgagaactataacggcgtatcagat
gtggagttgaggatagccatgcctgataaaaccaccgtcacagtccgagtccgcaaaaac
tgtacaactgaccaggtctaccaggctgtggtcatgacagtaggaatggacagcataaca
gccagctactttgctttgtttgaggtcatcaaccactcctttgtgcgtaaactggctcct
aatgagttcccccacaagctgtatgttcagaactacacgtctgctgtccctgggacctgc
ctcaccctgcgtaagtggctcttcaccaccgaggaggagatcctgctcaatgacaaccaa
ctggccgtcagctactgcttccaccaggcggtggatgatgtgaaaaggggatttatcaag
gcagaggagaagtcctaccagctacagaaattagcagaacagaagaagatggccatgtat
ctcagtatgttacggggctgtgaaggctacaacgagatcatcttcccacactgctcctgt
gactcccgacgcaaaggccacgtcgtcacagccatcagcatacaccactttaaactgcac
gcctgcacagaggagggaacgttagagaaccaggtgatcgtgtttgagtgggtggagatg
cagcactgggacactgatgaggagggcatggccttctgcttccagtacgccagggcagag
aagaaacctcgctgggtcaagatctttactccctacttcaactacctgcatgagtgcgtt
gagagagtcttctgtgaactcaagtggaagaaagaggtggaagaggaggctgtggataag
gacaataagaactgcagtaaagaagattatcttccagctgttgagacacagaagggatgg
aggcacctaggaggagagatcatcacctcctaa
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