KEGG   Oncorhynchus mykiss (rainbow trout): 110536313
Entry
110536313         CDS       T07259                                 
Name
(RefSeq) synaptobrevin homolog YKT6
  KO
K08516  synaptobrevin homolog YKT6
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04130  SNARE interactions in vesicular transport
omy04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    110536313
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110536313
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110536313
Membrane trafficking [BR:omy04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Ykt6
    110536313
SSDB
Motif
Pfam: Longin Synaptobrevin DUF8415 SLM4 DUF6621
Other DBs
NCBI-GeneID: 110536313
NCBI-ProteinID: XP_021477717
Ensembl: ENSOMYG00000018727
UniProt: A0A060XT08
LinkDB
Position
11:69697961..69705172
AA seq 198 aa
MKLYSLSVLHKGATKSNLLKSAYDLSSFSFFQRSSVQEFMTFTSALIVERSAHGSRASVK
EQEYLCHVYVRNDSLSAVVIADSEYPQRVAFTLLDKVLEEFSRQVDSIDWPSGNPETINY
KALDIHLAKYQNPREADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq 597 nt   +upstreamnt  +downstreamnt
atgaagctgtacagcctcagcgtcctccacaaaggagcaacaaaatccaacctccttaaa
tctgcctatgacctatcctcctttagcttcttccaacgctccagtgtccaagagttcatg
accttcaccagcgccttgattgtggagcgttctgcacacggcagccgagcctcagtcaaa
gaacaagagtacctgtgccacgtgtatgtgaggaatgacagtctgagtgcagtggtgata
gcagacagcgagtatcctcaaagggtcgccttcacactactagacaaggtgctagaggag
ttctccagacaagtggacagcatagactggccatctggaaaccctgaaaccatcaactac
aaagctctggacatccacctggccaagtaccagaaccccagagaggcagatgctatgacc
aaagtgcaggctgaactggacgagacaaagatcattctgcacaacaccatggagtctctg
ttggagagaggggagaagctggatgatctggtgcagaagtctgaacaccttgggaaccag
tctaaagccttctataagactgcacggaagcagaactcatgctgcgaggtcatgtaa

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