Oncorhynchus mykiss (rainbow trout): 110536359
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Entry
110536359 CDS
T07259
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy02010
ABC transporters
omy04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110536359
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110536359
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110536359
Transporters [BR:
omy02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110536359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
ABC2_membrane_2
Motif
Other DBs
NCBI-GeneID:
110536359
NCBI-ProteinID:
XP_036792155
Ensembl:
ENSOMYG00000021540
LinkDB
All DBs
Position
11:complement(72452920..72584061)
Genome browser
AA seq
2560 aa
AA seq
DB search
MGFLHQLHLLLWKNVSLKRRGPWVLAFEIFIPLVLFFILLGLRQKKPAIPVKEAFYSAAP
LTSAGIIPIMQSLCPDGQRDEFGFLQYKNSTVTQLLERISDVVLQNHLLTADRPGLGQEL
ESLQQHLERLSTPTGPSSLDNGFNTSQGFTVASMLKNQSVFRQFLVRNLSLPNNTASLLL
STPVNLKEVFNMIFGLYPRAGGGSSHASGGAKETAQTPAEKSLQLEEKLLGAMHRLDGGL
IHKALRDPTKAAHRQGLLKLMSQALGLAEGEAGQRYDPQGLKEMEDVLLTGAMLEMLTCG
EDGTGELSKILLVPEKQQSLLQAYRSTVCGGGEGQRTERFGQMSQELRDQIDTQSLVDKL
RLEKVNFSAPLSQSHLGALLKDLADVERLVRDVDLLSGLARLLPKGACAGGHTALGAPAN
TTTSWARNATTWGPNTTETPGEEGGEEEGGGREKEKGKENPHSQFSAFVQLWAGLQPILC
GNDRIIEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYSPVGSQVDKVIQKANE
TFAFVGNVTHYARVWLNISAQLRTYLEEGKLHHQLAWLQLLTSNLRGHPELLNGTDSDLL
RGLLDGNYTLSNTSTLLEQLDTIDNAACGWTHFMSKVSVDIFKGFPDEDSIVNYTLNQAY
HDNISVFASVIFQTNRDGSLPPHVLYKIRQNSSFTEKTNEIRRAYWRPGPNTGGKFYFLY
GFVWIQDMIERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVY
SVAMMIQHIVAEKEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGRVL
LHSDILIIWLFLSIYAIATIMFCFLVSVIYSKAKLASACGGIIYFLSYVPYMYVAIREEV
AHDKITAFEKCIASLMSTTAFGLGSKYFALYEVSGVGIQWRTINQSPVEGDDFNLGLSMM
MLIIDASVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRVETWEWPWGGAARLSV
MEEDQACAMEHRRSGKPSCSLTSDNRRSEEMRGMEEEPSHLPLVVCIDKLTKVYKTGNKL
ALNKLSLNLHENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTDMERIRQN
LGMCPQHNVLFDKLSVEEHLWFYSKLKGMAEEDIRKEMDKMIEDLELNNKRHSLVQTLSG
GMKRKLSVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEAD
LLGDRIAIISHGKLKCCGSPLFLKSTYGDGYKLTLVKKQSESGDQVTQPPFFLSPCSSSS
LSPSSSLSPSSLSPCSEARVTKFIRQFVGSCLLVSDSNTELSYVLPSEAVKKGCFERLFQ
ALEQSLDLLALTSFGVMDTTLEEVFLKVSEEDQSLENSDADMKDSPGGSSVGKPAATVVG
LGAPGPQGDGPGPGAPAGGSSSVLRPGVELSNLLNCSRLSQSQSSLRSSSSLGSVRGDEG
GLYTDFYGDYCPLFDNGQDPDSTSLTAEADESSGPEQPVVLEDQGSFKLEGWWLKLRQFH
GLIVKRFHCAKRNTKGLFSQILLPAFFVCVAMTVALSVPSIGDLPPLVLSPSQYHNYTQP
RGNFIPYANEDRPQYSSKLSPDASPQKIANTLRLPSGVGATCVLKTPFNSTLDQLAQTLN
PSANNSKTLAARYFDSMCLDSFTQGVPLSNFVPPPPSPAPSDDPDPRFEDRLWNFTAATL
TTVRETVTSPPTLPLSIREPVRCICSMQGTGFSCPSGVGGRPPLMKVVTGDILVDITGRN
VSEYLLYTSDRLRLHRYGGLTVGNIQKSVPASFGKNNPPMVRKIAVRRSAQVLYNNKGYH
SMPTYLNVLNNAILRANLPPGKGNPAAYGITLTNHPMNRTSARLSLDYLLQGTDVVIAIF
IIVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCDPVIYWLANYVWDMLNYLVPATCCVLI
LFVFDLPAYTSPTNFPAVLSLFLLYGWSITPVMYPASFWFEVPSTAYVFLIVINLFIGIT
ATVATFLLQLFEHDKDLKLVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQFD
KIKSPFEWDIVTRGLVAMTIEGFVGFFITILCQYNFLRKPSRVPVSSQPIEDDDEDVASE
RRRVLRGEADNDMLKIDNLTKVYKSRKMGRILAVDRLCLGVRPGECFGLLGVNGAGKTTT
FKMLTGDESTTGGEAFIGGSSILKELLKVQQSIGYCPQFDALFEDLTAREHLELYTRLRG
IPWKDEERVVSWALEKLELSKYADMPAGTYSGGNKRKLSTAIALIGYPSLVFLDEPTTGM
DPKARRFLWNLILDILKTGRSVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRF
GDGYMITVRTKTSSSVKEVVRFFNRNFPEAVLKESHHTKVQFQLKSERISLAQVFSKMEQ
VVEVLGIDDYSVSQTTLDNVFVNFAKKQSDNLEQQESLPPGGGQSPLQRLLTLLRPRLAN
TELDALVSEEPEELESDDDEGLISFEEERVQLSFNTDTLC
NT seq
7683 nt
NT seq
+upstream
nt +downstream
nt
atgggattcctccaccagctacatcttctgttgtggaagaatgtgtctttgaagagaaga
ggaccgtgggtgttggcctttgagatcttcatccccctggtccttttcttcatcctgctg
ggcctgcgccagaagaaacctgccatccctgtcaaggaagccttctacagcgcagcaccc
ctcacctcagcaggcatcatccccatcatgcagtctctgtgtcccgacggccagagggac
gaatttggcttcctgcagtacaagaactccactgtgacccagttgttggagcggatcagt
gatgtggtgttacagaaccacctgctcacagcagacaggccaggactgggccaggagctg
gagtccctgcaacaacacctggagagactcagcacacccacagggccctcctcgctggac
aacggcttcaacaccagccaagggttcaccgtggccagtatgttgaagaaccagtctgtg
ttccggcagtttctggtcaggaatctgtctctccccaataacacggccagccttctgctc
tccactcctgtcaacctcaaagaggtcttcaacatgatatttggcctgtaccccagagct
ggaggggggagtagtcatgcttcaggaggggcaaaagagaccgcacaaacccctgcagag
aagagccttcaactggaagagaagcttctgggagccatgcatcgtctggacggaggactg
atccacaaagctttacgagacccaaccaaagcagcccatcggcagggcctactcaaactc
atgtctcaggcattaggcctagcagaaggagaggcaggccagagatacgatccccaggga
ctaaaggagatggaggatgttctcctgactggtgccatgttggaaatgcttacttgtggg
gaggatgggactggtgagctgagcaagatcctattggttcctgagaagcagcagtccctg
ctccaggcctatcgcagcacagtgtgtggtggcggggagggacagaggactgagcgcttt
ggacagatgagccaggagctgagagaccagatagacacacagagcctcgttgacaagctg
cgtctggagaaggtcaacttctcggctcctctgtcccagtcccacctgggtgctctgctg
aaagacctggctgacgtggagaggctcgtcagggacgtagacctgctgtcaggcctggct
cgcctgctccctaagggggcctgtgctgggggtcatacggcccttggggccccagccaac
accaccacctcctgggcccgcaatgccactacctgggggcccaacaccactgagacccct
ggggaggagggaggagaggaggagggtggaggacgagagaaagagaaagggaaagagaat
cctcattcacagttttctgcttttgtacagctgtgggcagggctgcagcctattctgtgt
gggaacgataggatcattgagcctgaagctttgaagcaggggaatatgagctctctgggt
ttcaccagtaaagagcagcgcaatctgggtttactcgtgcatctgatgactacaaatccc
aagatcctctactcacccgttggctcacaagtggacaaagtcattcagaaggcaaatgag
acatttgcgtttgtggggaacgtgactcactacgccagggtgtggctcaacatctctgcc
cagctcaggacctacctggaggagggcaagctgcaccaccagctggcctggctgcagctg
ttgacctctaacctgcgtggtcacccggagctgctgaacgggacggacagtgacctgttg
cgtgggctgctggatggcaactacaccctgtccaacacctccaccctgctggagcagctg
gacaccattgacaacgcagcatgcggctggacacacttcatgtccaaggtcagtgtggat
atcttcaagggtttccctgatgaagacagcatcgtcaactataccctgaaccaagcctac
cacgataacatttcagtgtttgccagtgtgatattccagaccaacagagatggctccctg
cctcctcatgtcctctataagatcagacagaactccagcttcacagagaaaaccaacgag
atccgccgggcctactggcgcccggggcccaacacggggggaaagttctactttctctat
ggctttgtgtggatccaggatatgatagagagagccatcattaacacgtttgtgggtcat
gacgtggtggagcctgggaactatgttcagatgttcccctacccctgctacaccagagac
gacttcctgtttgtgatcgagcacatgatgcctctgtgcatggtgatctcctgggtgtac
tctgtagccatgatgatccaacacattgtggctgagaaggagcaccggctcaaagaggtg
atgaagatgatgggcctgaacaatgcggtccactgggtggcctggttcattactggcttc
gtccagctgtccatctcagtgaccgccctgacggccatcttgaagtatggcagagtgctc
ctccacagtgacatcctcatcatctggctcttcctctccatctacgccatcgcaacgatc
atgttctgtttcctggtgtcagtgatctactctaaggccaagctggcgtctgcctgtggc
gggataatctacttcctaagctacgtcccctacatgtacgtggccatcagggaggaggtg
gcccatgacaagatcaccgcctttgaaaagtgcattgcttctctgatgtcgaccacagcg
ttcggcctgggctctaagtactttgccctgtatgaggtgtcaggagttggcatccagtgg
cgcaccatcaaccagtcgcctgtagagggcgatgactttaaccttggtctgtccatgatg
atgctcatcatcgatgccagtgtgtatggagttctcacctggtacatagaagctgtgcat
ccagggatgtatgggctgccccggccgtggtacttccccctgcagaagtcctattggctg
ggcagtgggcgtgtggagacgtgggagtggccttggggaggagcagccaggctgagtgtc
atggaagaggaccaggcgtgtgccatggaacaccggcgatctggtaagccaagctgcagc
ctgacctctgacaaccggcgatctgaggagatgcgtggtatggaagaagagcccagccac
ctgcccctggtggtgtgtatagacaagctgaccaaggtgtacaagacgggcaacaagctg
gccctcaacaagctgagcctcaaccttcatgagaaccaggtggtctccttcctgggccac
aacggagctggcaagacaaccaccatgtctattctgacaggtctgttcccgcctacctcg
ggctcagccaccatctacggccatgacatccgtactgacatggagcgtatcaggcagaac
ctgggcatgtgtccccagcacaacgtgctctttgacaagctcagtgtggaggagcacctg
tggttctactccaaactcaaaggcatggccgaggaggacatccgcaaggagatggacaag
atgatcgaggatctggagctgaataataaacggcacagcctggtccagactctgtctgga
ggaatgaaacggaaactgtccgtagccatagcgtttgtgggcggctcccgggcagtcatc
ctggatgagcccacggcgggtgtcgacccttacgcacgcagagccatctgggacctcatc
ctcaagtacaaacagggccgcaccatcctgctgtccacccaccacatggatgaggctgac
ctgttaggagaccgcatagccatcatctcccatgggaaactcaagtgctgcggctcccca
ctctttctcaagagcacctacggagacggctacaaactcaccctggtcaagaaacagagt
gagagcggcgaccaggtcacccagcctccattcttcctgtctccctgctcctcctcctcc
ctgtctccctcctcctccctgtccccctcctccctgtctccatgctcggaggcccgggtc
accaagttcatccgtcagttcgtggggtcctgtctgctggtgtctgactccaacactgag
ctgtcttatgtgctgccttcagaggctgtcaagaagggctgcttcgagaggctctttcag
gcgttagagcagagtctggacctcctggctctgaccagcttcggggtgatggacaccact
ctggaggaggtcttcctcaaggtgtcagaggaggaccagtccctggagaacagtgatgct
gacatgaaggattccccgggcggtagctcagtggggaagcctgctgctacggtggtgggt
ctgggggcccctgggccgcagggtgatggcccggggccgggggctcctgcaggaggcagc
agcagtgtgctgagaccaggggtagagctcagtaacctgctaaactgctccaggctcagc
cagagtcagtcgtccctgcgctcatcctcctccctggggtccgtgcggggggacgagggg
gggctctacacagacttctatggagactactgccccctcttcgacaacggacaagaccct
gactctaccagtctgacggcggaagcggatgagtcctctggccctgagcagcctgtggtc
ctggaggaccagggcagcttcaagctggagggttggtggctgaagctacgtcaattccat
ggcctcatcgtgaagaggttccactgtgccaagaggaacaccaagggtcttttctctcag
atcctgctgcctgcattcttcgtctgtgtggccatgaccgtagccctgtcggtgccttcc
atcggagatctgccaccattggtcttgtctccatcccagtaccacaactacacccagcct
cgtggcaacttcatcccctacgccaacgaagatcgcccacagtacagcagtaaactgtcc
ccagacgccagccctcagaagatcgccaacacgctccgtctgccttctggcgtgggcgcc
acctgcgtcctcaaaacgcccttcaacagcaccctggaccagctggcacagacactcaac
cccagtgccaacaactccaaaaccctagctgcccgctactttgactccatgtgtctggat
tccttcacccagggagtgcccctgtccaacttcgtaccccctcccccctcgccagccccc
tcagatgaccccgaccctcgttttgaggatagactgtggaacttcactgctgccactctt
accactgtacgggaaacagtgacctctccacccaccttacctctgtctatccgggagccg
gttcgttgtatctgctccatgcaggggacgggcttctcctgccccagtggggtcgggggg
cggccgccccttatgaaggtggtcactggggacattctggtggacatcaccgggcgcaac
gtgtcagagtacctcctctacacctctgacagactgcgcctgcacagatatggaggactc
actgtaggcaacatacagaaatcagtcccagcatcctttgggaaaaataatccgcccatg
gttcgcaaaatagccgtgcgtagatcagctcaggtgctgtacaataataaagggtaccac
agcatgccaacctatctcaatgtcctcaacaacgccatcctgcgcgccaacctgcctcca
ggcaagggcaaccctgctgcatacggaatcaccctgaccaaccaccctatgaaccgtacc
agtgcaaggctctctttggactacctgctccagggcactgatgtggtgatagccatcttc
atcatcgtggccatgtcctttgtaccagccagctttgtggtcttcctagtggcagaaaag
tctaccaaggcgaagcacctgcagtttgtctctggatgtgacccagtcatctactggctg
gccaactacgtatgggacatgctgaactacctggtgccagccacatgctgtgtccttatc
ctgtttgtctttgaccttcctgcgtacacatccccaaccaacttccccgcggtcctctct
ctcttcctcctctacgggtggtctataactcctgtcatgtaccctgcctccttctggttc
gaggtgcccagcacggcctatgtgttcctcatagtcatcaacctcttcataggaatcact
gccactgtagccaccttcctgctgcagctctttgaacatgacaaggatctgaaactggtg
aacagctacctaaagtcctgtttccttatcttcccaaattacaacctgggtcacggcctg
atggaaatggcctacaacgaatacatcaatgagtactatgctaaaataggtcagtttgac
aagatcaagtctccatttgagtgggatattgtgactcgagggctggttgccatgacaatc
gagggctttgtaggcttcttcataaccatcttgtgccagtacaacttcctcaggaaaccc
tcgagagtaccagtcagcagccagcccatagaggacgatgatgaggatgtggcctctgag
agaaggagagtactgagaggagaagctgacaacgacatgctgaagattgacaacctcacc
aaggtgtacaaatcgaggaagatggggcgtatcttggctgtggaccggctatgtttgggc
gtgcgtcctggggagtgtttcggcctcctgggtgtgaacggagcagggaagaccaccacc
ttcaagatgctgactggagacgagagcaccacgggaggagaggccttcataggggggagc
agtatcctgaaggagctgttgaaggtgcagcagagcattggctactgtcctcagtttgac
gccctgtttgaagacctaacagccagagaacacctggagctgtacacacgcctccggggc
atcccctggaaggacgaggaaagggtggtctcatgggccctggagaaactggagctgtcc
aagtatgcagacatgcccgctggcacctacagtgggggaaacaagcgcaagctgtccact
gccatcgccctcatcggatacccctctctcgtattcctggatgaacccacgacagggatg
gatcctaaggcccgcagattcctctggaacctcatcctcgacatcctcaagacaggacgc
tctgtggtgctgacatcacacagtatggaggagtgtgaggctctgtgcaccagactgggc
attatggtcaacggcaggttcaaatgcctgggtagcatccagcacctcaagaacaggttt
ggtgatggttatatgatcacagtccggaccaagaccagttccagtgtgaaggaggtggtg
agattcttcaacaggaatttccctgaggctgtactaaaggagagccaccacactaaggtc
cagttccagctgaagtcagagaggatctccctggcccaggtgttcagtaagatggagcag
gtggtcgaggtgctgggaatagacgactactctgtcagccagaccacactggacaacgta
tttgtgaactttgcaaagaaacagagcgacaacctggagcagcaggagagtttgccccct
ggtggaggccagtcgccactgcagcgcctgctaaccctgctcagaccccggctggccaac
acggagctcgacgccctggtcagcgaagaaccggaggaactagagagtgatgacgatgag
ggcctcatcagcttcgaggaggagagggtgcagctctcctttaacacagacacactctgt
tga
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integrated database retrieval system
