Oncorhynchus mykiss (rainbow trout): 110536396
Help
Entry
110536396 CDS
T07259
Symbol
si:dkey-13n15.2
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110536396 (si:dkey-13n15.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110536396 (si:dkey-13n15.2)
Membrane trafficking [BR:
omy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110536396 (si:dkey-13n15.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
110536396
NCBI-ProteinID:
XP_036792269
LinkDB
All DBs
Position
11:complement(76051201..76086522)
Genome browser
AA seq
1181 aa
AA seq
DB search
MDIPAANQSYGHGGQPRVCHNGWSATTPPTGLGCTSAQGLSSDPLPSLQVLNLGPASHQS
PSKNIPQSMAQLQYSHQGCLSSLPTPPFRNQSPSALIPCLNQEPHIPHVHMGNYISYNIP
PPSTHLPLKQGPPASGPPSTIPSSNQGPQNTVSPPVSSSPPYPPYPSSNQGPQNTVSPPV
SSSPPYPPYPSSNQGPQNTVSPPVSSSPPYPYANQGFVNGPPVTLTSPNQGFVNGPSVTL
TSPNQGFVNGPPVTLTSPNQGFVNGPPVTLTSPNQGFVNGPAVTLTSPNQGFVNGPPVRL
TSPNQGFVNGPPVMLTRPNQGPPNSSFSSMSPCGSQSQQCSHPYPPQLTSPVQQQPQWAL
PQQHYSHSGVMYKPGATSHPVQEGTTMQPSCPSLGDSGVSGPSSPISESRYGLHPQLLPS
AVRMMEEDRTAWEGKVFVSEPISSLPPLATTDCVMEDRGNCSPRFILSTSYCVPCEGQTA
LQSHLPLGALVSPLAKLHTGERPLSVCMEADTVKGCGECGAYMCSAMGWQDCGQRFYCPF
CGKLREVGWQHYQPTQGVEGNRVDREQRPELSLGSYEILDSQQDVPAAVLLLAVDVSAAA
LRGGHLELISQQLRSLLTSLNREEGAFQSDVRVGLMTYDSRIHLYDLSPALSRPHMLVVT
ETEDLQLPVREGLLVPLKDCIDSINSVLQRIPLFSAEFEEASGILLELPVKAGLVVLQEL
GCPGKLLVFQTAPFIEGTHTHNSSSFFSSNKPKSLFQPPDPAVSLAKECVSQGCGVHLFV
FSQQDVGGAWPGHVPYLTGGELHCYHSLQGELDRERFSSDLRRTVETETGYRATLRVHVS
KDLRVSGCYGSFVPGPNPAHVTMATLDWRTTLAVELTHSRALDEKRGVVIQTVLSYTSQQ
GERRTRVHSLSLCCSHHLLDTFCNCQAQTLLTFYCKKMYCAVLERPLQELREELQTEVTE
SLACYRKHCSSSSVSPGQLVLPQHLKTLPVYLNSLRKSEVLLPGLRSSVHQRLQLRCQVV
SMDTKTTAGHFYPLLLPLPVGGDTSSPLSLGEAVRCTAASLDHGVLYLVHGPLVLLLWVG
HNVSNTSLVQLFNITCLSTLPSGETKLPVLDNPLSVSVRSLINTLNSQTHYTRKLRVVKQ
GDSCEEALQRLLVEDKSPNGGASYADFLYHLHVNSIQLLVR
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggacattccagctgccaatcagagctacggacatggcgggcagcccagggtgtgtcat
aatggctggtcagcaaccacacccccaaccggtcttggatgtacctctgcccaaggactc
tccagtgaccctctacccagcttacaggttctgaacctgggcccagcctcacaccagagt
ccctctaaaaacatccctcaatccatggctcagttacagtactcacaccagggctgtctc
agcagtcttcctacgcccccatttaggaaccaatcaccttcagctcttataccatgcctg
aatcaagagcctcacataccacatgtacacatgggtaattatatttcctacaacattcct
ccaccatcaacacacctccctctgaaacaaggtccgccagctagtgggcctccatccacg
ataccgtcttcaaaccagggtccccagaatactgtctctcctccagtctcttcctctcct
ccatatcctccatatccgtcttcaaaccagggtccccagaatactgtctctcctccagtc
tcttcctctcctccatatcctccatatccgtcttcaaaccagggtccccagaatactgtc
tctcctccagtctcttcctccccaccatatccgtatgcaaaccaaggctttgtgaatggc
cctcctgtgacgttgacaagtccaaaccaaggctttgtgaatggcccttctgtgacattg
acaagtccaaaccaaggctttgtgaatggccctcctgtgacattgacaagtccaaaccaa
ggctttgtgaatggccctcctgtgacattgacaagtccaaaccaaggctttgtgaatggc
cctgcagtgacgttgacaagtccaaaccaaggctttgtgaatggccctcctgtgaggttg
acaagtccaaaccaaggctttgtgaatggccctcctgtgatgttgacaagaccaaaccaa
ggacctcccaacagcagtttttcctccatgtcaccatgtgggagccagagccaacagtgt
tcacacccgtatcctccacaactcacctcaccagtccagcagcaacctcaatgggccctg
cctcagcaacactatagtcacagtggtgtaatgtacaagcctggtgccacctcacatcct
gtacaggagggtaccaccatgcaaccgtcctgtccgtctctgggggacagtggggtgtcc
ggccccagctcacctatctcagagtcacgctatggcctacaccctcagcttctacccagc
gctgtgcgtatgatggaggaggacaggacagcgtgggaggggaaggtgtttgtgtctgaa
cccatctcctctctacctccgctggctaccacagactgtgtcatggaggacagaggtaac
tgcagtcctcggttcatcctttctacctcctactgtgttccgtgtgagggccagacggcc
ctccagagccacctacccctgggggccctagttagccctctggctaagctacacacagga
gagcgccccctgtctgtgtgtatggaggcagacactgtaaagggctgtggggagtgtggg
gcttacatgtgttcagctatgggatggcaggactgtggacagagattctactgcccattc
tgtgggaaactccgtgaagttggatggcagcattaccagccaacccagggagtagagggg
aacagagtggacagagagcagagacctgagctcagtctgggctcctatgagatactggac
agtcaacaggatgtgcctgctgctgtgttgctcctggctgtggatgtgtctgctgcagct
ctgagaggaggacacctggagctcatcagtcagcagctacgttctctactcacatcacta
aatagggaggaaggtgcgttccaatcagatgtccgtgtggggttgatgacctatgacagc
cggatccacctctatgacctcagccctgccctgtctcgcccacacatgctggtcgtcacg
gagacggaggacctgcagcttcctgtgagggaggggcttctggttccactcaaagactgc
atagacagtatcaacagtgtcctgcagcgtatccctctgttcagtgcagagtttgaggag
gccagtggcattctcctggagctgcctgtcaaggctggactggtcgttctacaggagttg
ggttgtcctggcaagctgctggtcttccaaactgctcccttcatcgaggggacacacaca
cacaactcctctagcttcttcagctccaacaaaccaaagtctctgtttcagcctccggac
cctgctgtctcattggctaaggagtgtgtcagtcagggctgtggcgtgcacctgtttgtg
ttctcccagcaggatgtgggcggggcttggccgggacatgttccttacctgacaggtgga
gagctgcactgctaccacagtctccagggagagttggacagagagcgtttcagcagtgac
ctgaggaggactgtagagacagagacgggctatagggccacactcagggtacatgtcagt
aaagatctgcgcgtgtcagggtgttatggctcgttcgtccccgggcccaaccccgcacac
gtcaccatggcaacccttgattggcgtacgacactggccgtagagttaacacacagcaga
gctctggacgaaaagaggggcgtggtcatacagaccgtcctgtcctacaccagccagcag
ggagagaggaggaccagggtccacagtctgtctctgtgctgctcacaccacctactggac
accttctgtaactgccaggcccagactctgctcaccttctactgcaagaagatgtactgt
gccgtgttggagcgccctctacaggagctgagagaggaactgcagaccgaggtgacagag
tcgttggcctgctataggaaacactgcagctcctcctctgtgtccccgggacagctggtc
ctaccccagcacctgaagaccctgccagtctacctcaacagcctgaggaagagtgaagtt
ctgcttcccggcctccgcagttcagtacaccaacgcctgcagctccgctgtcaagtggtc
tccatggataccaagaccacagcaggacacttctaccctctgctgctaccactgccagta
ggtggcgatacctccagtcctctcagcctaggggaggctgttcgctgcactgctgctagc
ctggaccatggagttctctacctggtccacggacccctggttctgctactctgggtgggc
cacaacgtctccaacacctccctggtccaactcttcaacatcacctgtctgtccacacta
ccctctggagagacgaagctgcctgtactggacaaccctctgtctgttagtgtgaggtca
ctcatcaacactctgaactcacagacacactatactcgcaagctgcgtgtggtgaagcag
ggggacagctgtgaggaggctctacagcgcctcctggtagaagataagagtcccaacggg
ggagcgagctacgctgacttcctgtaccacctccatgtcaactctatacaactgctggtt
cgttag
DBGET
integrated database retrieval system
