Oncorhynchus mykiss (rainbow trout): 110536467
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Entry
110536467 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1 isoform X1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110536467
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110536467
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110536467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Zn_SUZ12
zf-C2H2
Di19_C
zf-C2HC_2
SWIRM-assoc_1
ATG14
Motif
Other DBs
NCBI-GeneID:
110536467
NCBI-ProteinID:
XP_036792389
LinkDB
All DBs
Position
11:complement(80305562..80320403)
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AA seq
422 aa
AA seq
DB search
MSRHEGQGIGQNGPSVNCLSPGVSCDACLKGNFRGRRYKCLICYDYDLCASCYEGGATTT
RHTTEHAMQCILTRVDFDLYYGGEALSVEQPQAFTCPYCGRMGYTETSLQEHVAAEHTET
SSEVICPICASLPGGDPNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGP
RARRSNMHFTSSTSGGSSTTQTSTQSSNYNREAMDPIAELLSQLSGVRRSAGGQLSSGPS
ASQLQQLQMQLQLERQQTQAARQQLETARSATQRSSRTSTNAGLNANPSPGHHNANPSSN
STSPNPGHHEFTTHTQHSNSQFLLNRLSEPRLSEAERQLSEGQWADRSLFVTELLLSTLL
ADPDHSEDDDLHDYHDAVIRGSDAFSDFGTFGDMGCVEVMTLDVALENLNLREQKEQRPP
PL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcatgaaggacagggtattggtcaaaatggtccgtctgtgaattgtctttcc
ccaggtgtgagctgcgatgcgtgtttgaagggtaacttccgggggcggcggtacaagtgt
ttaatttgctacgactacgacctgtgtgcgtcgtgctacgagggcggagccacgaccacc
aggcacacaacagaacacgccatgcagtgcatactaaccagggtcgacttcgacctatat
tatggaggagaggccttgtcagtggagcagccacaggcctttacctgtccctactgtggc
aggatgggctacacggagacctcccttcaggagcacgttgctgcagagcacacggagacc
tcctcagaggtgatctgtcccatatgtgcttcgctgcccggcggggaccctaatcacgtg
actgacgacttcgctgctcatctcacacttgaacacagagcccccagagacttggatgag
tcgagcggggtgcggcacgtgcgtaggatgttccacccgggtcggggtctaggggggccg
agggctcgtcgatccaacatgcacttcacctcctcaacctccggggggagctctaccaca
cagacctctacacagagctccaactacaacagggaggccatggatcctatagctgagctt
ctctcccagttgtcgggggtgcgtaggtcggcgggcggccagctgagttcaggtccttca
gcatcccagctacagcagctccagatgcagctccagttggagcggcaacaaacccaggct
gccagacagcagttggagacggcccggagtgccacgcaacgcagcagccgcacctccacc
aacgcagggctgaatgccaatccaagcccagggcatcacaatgccaaccccagttccaac
tctaccagccccaacccagggcatcacgagttcaccacacacactcagcacagcaactcc
cagttcctcctcaacagactgagtgagccgaggttgtcggaggcggagcgtcagctgagt
gagggccagtgggcggaccgctctctcttcgtcacggagctcctcctctccaccctgctg
gccgatcccgaccacagcgaagatgacgatctccatgactaccacgacgccgtgatccga
ggttctgacgcgttcagtgatttcggcaccttcggagacatgggctgcgtggaggtcatg
accttggacgtggcgttggagaacctcaacctccgagaacaaaaggagcagcgacccccg
cctctttga
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