Oncorhynchus mykiss (rainbow trout): 110536488
Help
Entry
110536488 CDS
T07259
Symbol
si:dkey-3h3.3
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110536488 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110536488 (si:dkey-3h3.3)
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110536488 (si:dkey-3h3.3)
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110536488 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-rbx1
zf-RING_10
DUF1272
KH_DTX3L
zf-RING_11
zf-C3HC4_4
zf-RING_4
DZR_2
zf-UDP
Zn_ribbon_6
Baculo_IE-1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
110536488
NCBI-ProteinID:
XP_021477933
Ensembl:
ENSOMYG00000033909
UniProt:
A0A8C7W4J3
LinkDB
All DBs
Position
11:82150351..82156992
Genome browser
AA seq
429 aa
AA seq
DB search
MANASLKEVFSDVTLTVDPNTFKEPNQVKYLLTGCGNRVTRTLHYEVRGSFDEIEDLFVK
MSSLDRCAAPNLRDSPLRHRQRPRSPSPVKPVAIVGAVWDFIQQRCSKELKRIQGEDVLI
RKPRDKMVVTFQSHGKDPVRVHFARERFVTFYQRLATDLKVKTYSLDPQYYKSLQGQFPE
LLIEGGPSKDNITVTGRYMHIVMLEDFLRHGSSSPVTSQRPLTPQRVSPRASGTTRNKQS
DDKELESCPICLDTIKEDRKKTLACKHSFCRGCLEEAFKTKPVCPTCGAVYGELKGTQPK
GGTMAVTKERSSLSGYEKYGTIVIQYHIPSGIQKEEHPNPGQTYQGASRTAYLPDSSEGR
NVLALLKRAFDQRLTFTIGRSSTTGMENMVTWNDIHHKTSRSGGTSCYGYPDPDYLRRLQ
DELKVKGIY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgcgtcattgaaagaggtattttcagatgtcactctcactgtagatcctaac
actttcaaagagcccaaccaggtgaagtaccttctcactggatgtggtaaccgcgttaca
agaaccttgcactacgaagtgcggggatcatttgatgaaatagaggacctgtttgtgaag
atgtcaagtctagacagatgtgccgcccccaatctcagagacagtcctcttcgtcaccga
cagcgtcctcggtcacctagtccagtgaaaccagtggcgatagttggagccgtttgggat
ttcatccaacagagatgctcaaaggagttgaagagaatccaaggggaagacgtcttaatt
cgtaaacctcgggacaaaatggtggtgacctttcaaagccacggaaaagacccggttcgg
gttcatttcgccagagagcgctttgtcacgttctatcagagactcgctacagatctgaaa
gtgaagacttacagtttggatccacaatactacaaaagcttgcagggacagtttccagaa
cttttgattgaaggaggccccagtaaagacaatattacagtgacagggcgctacatgcat
attgtgatgttggaggattttctacggcacggttccagttcccctgtgacatcacaacga
cccctgacaccccagagagttagcccccgagcctctggtactacacgcaacaagcaatcg
gacgacaaagaattagagtcatgtccgatttgtctggacaccattaaagaggacagaaag
aagacgttggcatgtaaacactcgttctgtagaggctgtctggaggaggcgttcaagacc
aaacctgtctgtccaacatgtggggcagtctatggggaactgaaggggacgcagccaaag
ggcgggactatggctgttactaaggaacgatcttctttgtctggatatgagaagtatgga
acaatcgtgattcagtaccacattccaagtggaatacagaaggaggagcatcccaaccca
ggtcagacttaccagggtgcatcccgtacagcgtatctcccagattcctcggagggcagg
aatgttctggctctcctgaagagggccttcgaccagcgactcacgttcactattggccga
tcttccaccacaggcatggaaaacatggtcacgtggaacgacatccaccataaaacctcc
aggagcggaggcaccagttgctatggataccctgaccccgactacctgagacgtctacag
gatgaactgaaggtcaaaggaatctattga
DBGET
integrated database retrieval system
