Oncorhynchus mykiss (rainbow trout): 110536490
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Entry
110536490 CDS
T07259
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110536490
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110536490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
110536490
NCBI-ProteinID:
XP_036792422
Ensembl:
ENSOMYG00000034081
UniProt:
A0A8C7T5H8
LinkDB
All DBs
Position
11:complement(82581716..82619626)
Genome browser
AA seq
1090 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPGAVAYTHPTTVASYTVH
QAPVAAHTVAAAYAPTAATVAVARPAPVAVAAAATAAAYGGYQPAHATADYGYAQRQPDV
PPPPPPVTSQNYQVGYQDSYSYVRSTAPAVTYDPKQYYQQPVASAAVAVQPQPTAESYYQ
TASLNTSWDTPWKKSLPASKTGYTQTSLAPYTQTQQTRQVTAIKPAVPSTFSIYPVSSTV
QPVAAASVVPSYSQSPTYSTNAVTYSGTSYSGYEAAVYSAASTYYQQQQQQQQKQAVAAV
AASAAWTGSSFTKKPTFQSKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKK
KEVALKVSQSSSSSSSGGGGGSARGTQNQLRCELCDISCTGADAYAAHIRGAKHQKVVKL
HTKLGKPIPSTEPNVVTQTPTSTTASSSSKTPASSSSTLTGSTSNSSYLKPVNIVSQGGV
GIGKGPATNNLSAANATTAVKKVNTPKINFVGGNKLQTTGKVTEEAKVEASKPPLPSLVP
QVQESKNESSDSLSASTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNA
KEMHLKGRRHRLQYKKKVNPELQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWR
MEMRRYEEDMYWRCMEEQHHWDERRGGPRMPGDGPYLQGPPGPPGLLGVRPGMPISQPQG
PVPPRRPDSSDDRYVMTKHTAIYPSEEELQAVQKIVSITERALKLVSDITDQEKTKETTG
EEKEKEVPKTAQDRALKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTKTLLSCIVEHLP
KQLVLVTPEKYEVKSSIEDCSIILTSEADPKMTVTVTLTSPSIREEETPATPPPRDGDVT
LVKDPEDVLDRLKCLAALAALRHAKWFQARANGLQSCVIVIRILRDLCQRVPTWSSFPSW
AMELLVEKTISSASGPLSPGDALRRVFECISSGILLPGGPGLVDPCEKNPTDTLTTMEEQ
HREDITSSAQFALRLLAFRQIHKVLGMDPLPQTNPRFNVHHNRKRRRDNDGADGFEGEGK
KDKKDFDSSY
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccagtggtctccttcacctatgtgcccagccggctaggtgaagat
gctaaaatggctaccggcaactactttggatttacccacggtgctgccgcgcagtacagt
cagcagccgggcgcggtggcctacacccaccctaccaccgtggccagctacacagtacac
caggcaccggtggctgcccacaccgtggcagcagcctacgctcccaccgctgccacggtt
gctgtagccaggcccgccccagttgccgtggcagccgcagccaccgccgcagcctacggc
gggtaccagccggcgcacgccaccgcagactacggctacgcacaacgccagccggacgtc
ccacccccgcctcccccggtcacctcccagaactaccaggtgggttaccaggactcctac
tcctacgtacggtctacggccccggcggtaacctacgaccctaagcagtactaccagcag
cccgtagctagcgctgcggtagccgtacagccccaacccacggccgagtcctactaccag
accgcctcccttaacacctcctgggacaccccgtggaagaaatccctaccagcttctaaa
acaggctacacccagacaagtctggccccctacacccagacccagcagaccaggcaggtg
acggccatcaagcctgctgtgccctccaccttctccatctacccggtctcctccaccgtt
cagcccgtagccgccgcctctgtggtcccctcctactcccagagccccacctactccacc
aacgcagtcacgtactctggcacctcgtattctggctacgaagctgcggtgtactctgct
gcctctacctactaccagcaacagcagcagcagcagcagaaacaggcggtggcggctgtc
gcagcttcagcagcctggacaggcagctccttcaccaagaaacctaccttccagagcaag
cagctgaaaccaaagcagccccccaaaccaccacagatccactactgtgacgtctgcaag
atcagctgtgcaggaccccagacctacaaggagcacctggagggccagaagcacaagaag
aaggaggtggccctgaaagtctcccagagcagcagcagcagtagtagtggaggtggagga
ggctcagcccgggggactcagaaccagctccgctgtgagctctgtgacatctcctgcacc
ggggcagatgcatatgctgcacacatccgaggagccaagcaccagaaggtagtgaagctc
cacaccaagctggggaagcccatcccctctacagaacccaatgtcgtgacccagacccct
acgtcaaccacggcctcctcctcctccaagacccctgcttcctcttcttccaccctcaca
ggctccacgtctaactcttcctacctgaaaccggtcaacattgtcagccagggtggggtt
gggattggcaagggtccagccacaaacaacctatcagcagccaatgccaccacagccgtc
aaaaaggtcaacacccccaagatcaactttgttggaggaaacaagctccagactaccggg
aaagtgacagaggaagccaaagtggaggcatccaaacctcctctgccctcattggtcccc
caggttcaggagtccaagaacgagtcctctgattccctgtctgcgtccaccctggctgcc
ctgcagagtgatgtgcagcctgttggacatgactatgtggaagaggtgcgtaacgatgaa
ggcaaggtgatccgtttccactgtaagctgtgtgaatgcagcttcaacgatcccaacgcc
aaagagatgcatctgaagggcaggagacaccgcctgcagtacaagaaaaaggtgaacccg
gagctgcaggtggaggtgaagccctctatcagagccaggaagatccaggaagagaagatg
aggaaacagatgcagaaggaggagtactggaggaggagagaggaagaggagagatggagg
atggagatgagacgttatgaggaggacatgtactggcgttgtatggaggagcagcaccac
tgggacgagagacgtggggggcccaggatgccaggggacggaccatacctccaggggcct
cctggcccacctggactactgggggttcggcctggcatgcccatctctcagccacaagga
cctgtgcctccccgtcgcccggactcgtcagacgatcgctacgtgatgacgaagcacacg
gccatctacccttctgaggaggagctgcaggccgtccagaagatcgtctccatcacagag
agagccctcaaactggtctcggacatcacagatcaggagaagactaaggagacgactggg
gaggagaaagagaaggaggtcccaaagactgcccaagacagagctctgaagggggtgatg
cgggtgggggtgctggctaaaggactgctgctccgcggagacaagaacgtcaacctggtc
ctgctctgttcagagaagcccaccaagaccctgctgagctgcatagtggaacacctgccc
aaacagctggtgctggtgaccccagagaagtacgaggtaaagagttccatcgaggactgt
tccatcatcctgacgtcagaagccgaccccaaaatgacagtcaccgtcaccctgacctcc
ccaagcatccgagaggaggagacccctgccacacccccgccacgggatggagatgtaacc
ttggtgaaagacccagaggacgtcttggacaggctaaaatgccttgccgctctggcggct
ctgcggcacgctaagtggttccaggctagggccaacggactccagtcctgcgtgattgtt
attcgaatcctgcgtgacctctgtcagagggtccccacgtggtcctccttccccagctgg
gccatggagctgctggtagagaagaccattagcagtgcctctggccccctgagcccaggc
gacgcactgagacgagtctttgagtgtatttcctctgggattctgctccccggtggtccg
ggattggtcgacccgtgtgagaagaaccccactgacaccctgacaaccatggaggagcag
cacagagaggacatcacctcaagtgcccagtttgctctgcggctgctagccttccgtcag
atccacaaggtgctgggcatggacccactgccccagacgaaccctcgcttcaacgtccac
cacaaccgcaagcgtcgccgcgacaacgacggagcggacggcttcgagggcgaagggaag
aaggacaagaaagatttcgacagtagttactag
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integrated database retrieval system
