Oncorhynchus mykiss (rainbow trout): 110536548
Help
Entry
110536548 CDS
T07259
Name
(RefSeq) laminin subunit alpha-1 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110536548
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110536548
09142 Cell motility
04820 Cytoskeleton in muscle cells
110536548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_N
Laminin_B
Laminin_II
Laminin_I
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
110536548
NCBI-ProteinID:
XP_036790744
Ensembl:
ENSOMYG00000012170
LinkDB
All DBs
Position
11:complement(11064970..11143146)
Genome browser
AA seq
3086 aa
AA seq
DB search
MMRLLCCAIVLLSASSAECQQRGLFPAIFNLASNAEITTNATCGEPEPEMYCKLVEHVPG
RRIRNSQCRTCNAQSQNPKEQHPITNAIDGTNGWWQSPSIKNGRQFHWVTLTLDLHQIFQ
VAYVIIKAANSPRPGNWVLERSMDGVEYTPWQYYAISDTECLTRYNITPRFGPPTYKRDD
EVICTSYYSRLVPLEHGEIHTSLINGRPSADQLTSELLDFTSARYIRLRLQRIRTLNADL
MTLSYRDPKEVDPIVTRRYYYSIKDISVGGMCICYGHAQSCPWDPVAKKLQCVCEHNTCG
ESCNECCPGYHQEPWQPGTLSDGNTCEKCNCHDKANDCYFNQTVANRKMSMNSHGDFHGG
GVCISCTQNTAGVNCEACADGFYRPNKVSPHNENPCVECSCDMKGSLTPACIRDDNHAKP
ENGLNPGQCLCMEGFAGERCDRCAFGYRDFPLCSHCECSLEGSLNIDPCTECICKENVMG
ADCDLCKQGFFNLEGSDPEGCTECFCFGVSDVCESSPWSMSQTMQSNGWLLTSESVSVYT
APLIDEDNNLIIPNITMIQSYRFVSTWASPESFLGKRLTSYGGFLSYSVAYDVSVDNVDR
SLPSQFDLIIEGNGRTLRQMPPMQLVLTPLREQHVSVELLPQGFVDLHTGQRVDRDELMT
ALADVAGLRIRGHLNASAEGELRLSTVSLDMVDINSTNTVQARDVEQCECPLGYSGTSCE
SCSSGFYRLGGILFGGNCLQCECNNHATECDINRVCLDCTHNTTGPHCDQCLHGYYGNPS
EGTPEDCQRCACPLTVATNNFSPTCLLEGPGQVTCDRCQQGYTGTKCERCANGYHGDPTV
AGQECVVCECNGNVDPWEPGHCDTSSGMCLKCHSHTSGDQCERCEDGYYGDAITAKNCQA
CGCHDKGSYSGVCDLLTGQCTCKPNVVGEKCDQCQVGFHGLLSGQGCRECDCIQSGSVSV
ACEEDGRCQCIPGVAGDKCDRCHHSYFNYQGSGCTQCECAHTHGNCNVTTGECICPPHTR
GEKCDLCEEGHWGHDTVTGCKSCNCSEMGSYATECGITNGQCQCRSDFAGQNCDRCAMGY
RGYPECTVCNCNINGTREEFCDEALGVCSCEAPGNCVCKDNVGGGGCDECKKGTLGLSVS
NPAGCSPCFCFGVSSDCEELGGMVRVPITLGSDPELLRVVSQSDLQGSVVGVYYQNPDML
LDTRDIETPSLAGPYYWRLPKHYQGNKLLSYGGNLSYVVAFYAMDGAGLANYEPQVLMRG
GHLGKQVIYIDMPAPDNGVTTRQDVPLTEHKWKYFNSVSEKAVSHSDFMAVLSHIEYITI
KASYGTGLQQSRISNITMDTALEAEQGLEDMELASLIEICECPAGYAGLSCQECAPGYYR
QPVTELNKRGKRPLIQPCVPCRCNNHSQACDLDTGECLGCQHNTAGEHCSVCSSGYYGDV
KGSVRDCSLCACPLKENSFSPTCALEGVVGDFRCNACKPGYEGRYCERCSVGYYGNPSGP
GGKCEECLCSTAGSLHPACDSLTGQCECKAGVRGRLCDQCEARHVLDGDQCVLCDDECTR
VLLDDLDAVECSFLSVNLTGVILSPYSTLVNLENDTQEVKILMSSYRSPDYHLTRDEEDM
TNLTQDIDGLLQKAMGVSADGEEVARSTENSVTQGAKLLEYINTIQTAIQALAEQAGRLN
RTDNVEMNEAKSRRLMKQVAAMLETIRVVDLAQANASVSTELWAAEALLQRVQKHLQEPQ
GVIESQTLNISSSLTQQQQQLVDAQALLNTARENNNHTHTLLGSINTNLPQYQGLRQNVS
RLNQTAETQLEETQDILADAVNLAEDMSNVTSQLEGAKEQLEQWNPMLRKHVDALVMELR
KQEALELVYKAEDHAQELSMKAQALQSSLAEVMNTTLKATSAAHANSNIRVNIQPAEEMA
NRAILTAAMALNMTAQQEVSLTDLGSEAVQCSAKILAECLALNNSTGGLLANISDVTDRM
ALLINNLHNTSRRIPQPAFLLHSLPNGTSEQVLEAKEQAAMANSSLQRALEYLEELRVRL
EESSKAVAQAKISVSNTNQLFSDSHSTARTAESKLNEAESRTERLYDRLKPLKTLRENLS
RNLSEIREMINQARKQAASIKVSVLADKDCVRAYKPEMSSSNFNTLTMTVKTSEPDNLLF
YMGSSSSVDFMAVEMHRGKVGFLWDAGSGHAKLEYPDIQINNNKWHRINATRFGKHGTLS
VHQLESDPLPAVKTTSPRSATILDVNKFTLIFVGGLGRQIKKSSAVKMTQFKGCMGEASL
NEKNIGLWNYAEREGQCRGCFMSPQTEETSFHFDGSGYSVVEKPLRSTSTSIVMLFKTLS
PNGLLLYLASNATRDFLSIELVEGQVHLTFELGSGPLTLSSNKAYNTGSWYKITLQRNKR
KAYISVMAADNSSDKEIIEAESPGSASDLNRSDLDPIYIGGLPMSRPIRRQVVARSYVGC
IKNMEIARSNFDLLRDSYGVKKGCVLEPIRSVSVLREGYVELPSMSLGYQGELLASFSTR
NHTGIILAGFSKAGTRRRRQARQPFLAVMLVSGHLEVHVNMVEGGSVHKVVVKSRSGSFS
DGQEHSVILQRNRKTMTVLVDEDHQETVRLSSEKASLTFSSLYMGGLPPEEGVGLLRTTS
SFYGCIRNLALDAKLLDLSAAVKYHNVDMDSCLLEERPKRVLLPDDTDLEADPTLDPSRP
PPPPPTQLSALTPGTLTCASMDNSTSLPEANQFGISRHSHKVLNINPNTVRRSFSLELSV
RTFAQSGLIYYMSHANQMDYATLQLLGGRLFFTCDKGSGPATASFPVPVNDGQWHTVKTD
FNKKSVVISVDSQASAPVLAKGNTLDVENKLYLGGLPHSYTAKKIGNVTHSLAGCIQKVI
LNSVELDTQSPVSEHSTAHCFTAAQDGTFFSGSGYAALMKEGYKVGSDVTVALEFRSTAP
DGVLLGVSSAKVDAIGLELASGQAVFHVNNGAGRVSATSRLGRWLCDGRWHTLLAKKTKN
ALSLSVDGVTVLTDNPHPQSTSAETKDPIYVGGFPVGVKQNCLTTRSPFRGCMRNIRLIK
GHVIDILDFSTAFTLQGVSPHSCPAT
NT seq
9261 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctcttatgctgtgcaattgtgctgctatctgcatcctccgcggagtgccag
caaagaggtctcttccccgccatcttcaacctggcaagtaatgcagagatcaccaccaac
gccacctgtggagagcctgagccagagatgtactgtaaactggtggaacacgtaccagga
cgacgcatccgcaactcccagtgtcggacctgtaatgcccagagtcaaaaccccaaagag
caacatccaatcaccaacgccattgacggcaccaacgggtggtggcaaagccccagcatt
aaaaatggcagacagttccactgggtgaccctcacactagatttacaccagattttccag
gtggcctacgtcatcatcaaggcagccaactctcctcgtcctggtaactgggtgctggag
cgttcaatggacggtgtggagtacacaccctggcagtactacgccatcagcgacacagaa
tgtctgacccgttacaacatcaccccccgcttcggaccccccacctacaaacgagacgac
gaggttatctgtacatcttactactcgcggctcgtacccctggagcatggagagatccac
acgtctttgatcaatgggcggcccagtgctgaccaactgacctcagagttgctggacttc
acctcagcccgctacatccgcctgcgtctgcagagaatccgcacgctcaacgccgacctc
atgaccctgagctaccgcgaccccaaggaggtggaccccatcgtcaccagacggtactac
tattcaatcaaagacatttcagtgggcgggatgtgcatctgttacggacacgcccagagc
tgtccctgggaccccgtagccaagaagttgcagtgtgtatgtgagcacaatacctgtggg
gagagctgtaatgagtgttgccctggctaccaccaggaaccgtggcaaccgggaaccctc
tccgatggcaacacctgcgagaaatgtaactgccacgacaaggccaacgactgctacttt
aaccagacggtggccaaccgcaagatgagcatgaactcacatggtgactttcatggcggg
ggcgtttgtatcagctgtacccagaacacggccggtgtcaactgtgaggcctgcgcagat
ggcttctacagacccaacaaggtgtctccgcacaatgagaacccatgtgtggagtgcagc
tgtgacatgaaggggtctttgactcctgcctgtatcagagatgacaaccacgccaagcct
gagaatggtctgaacccaggccagtgtctgtgtatggagggctttgcgggcgagcgctgt
gaccgctgtgcctttggctacagggacttccccctgtgttcacactgtgagtgcagtctg
gagggcagcctcaacatcgacccctgcacagagtgcatctgcaaggagaacgtgatgggg
gccgactgtgacctgtgtaagcagggtttcttcaacctggagggcagtgacccagagggc
tgcacagagtgtttctgctttggtgtgtctgatgtgtgtgagagctcaccctggtctatg
tctcagactatgcagtccaatggatggctccttacctctgaaagcgtctctgtctacacg
gcacccctcatagatgaagacaacaacctcatcatcccaaacatcaccatgatccaatcg
taccgttttgtttctacatgggcctccccagagtccttcctggggaaaaggctgacatcg
tacggagggtttttgagctacagtgtggcatatgatgtttcagtggacaacgtggacagg
tctctgccgtcacagtttgatttgattatcgagggtaatgggaggaccctgcgtcagatg
ccccccatgcagctcgtgttgacgcccctgcgcgagcagcatgtttctgtggagctcttg
ccacagggcttcgtagatctgcacacaggtcagagggtggacagggacgaactgatgact
gcactggccgacgtggccgggctgaggatcagaggtcacctcaatgccagtgcagagggg
gaactcagattgagcactgtatctctggacatggtagacatcaattctactaacacagtc
caggcccgggacgtggagcagtgtgagtgtcccttgggctactctggcacatcctgtgag
tcctgttcatctgggttctatcgcctcggggggatcctgttcggaggcaactgtctccag
tgtgagtgtaacaaccatgctacggaatgtgacatcaacagagtgtgtctggactgtact
cacaataccactgggccccactgtgaccaatgcctccacggttactatggcaacccctct
gagggcaccccggaggactgccagagatgcgcttgcccgctgacagtggcaacgaacaat
ttcagccccacctgtctcctggagggccctgggcaggtgacatgtgaccggtgtcagcag
ggctacactgggactaagtgtgagaggtgtgctaacggttaccacggcgacccgacggtg
gcaggccaggagtgcgtggtgtgtgagtgtaacggtaacgtggacccctgggagccgggc
cactgtgacaccagcagcggtatgtgtctgaagtgtcacagccacaccagcggagaccag
tgtgagaggtgtgaggacggctactacggtgacgccatcaccgccaagaactgccaggct
tgtggttgccatgacaaagggtcgtactcgggagtgtgtgacctgctcactggacagtgt
acctgcaaacccaacgtggtgggagagaagtgtgaccagtgtcaggtgggcttccacggt
cttctcagcggacaggggtgcagagaatgtgactgtatccagtcaggatctgtgtccgtg
gcctgtgaggaagatgggaggtgccaatgcatcccaggggtggcgggggacaagtgtgac
cgctgtcatcacagttactttaactaccagggcagcggctgtacacagtgtgagtgtgcc
cacacccatggcaactgtaatgtgacgacaggcgagtgtatctgtcctccccacaccaga
ggagagaagtgtgatctgtgtgaggaaggtcactggggtcacgacactgtgacaggctgt
aagtcatgtaactgcagtgagatgggcagctatgccaccgagtgtggcatcaccaacggg
cagtgccagtgccgctctgatttcgctgggcagaactgtgaccgctgtgccatgggctac
aggggctacccagaatgcacggtgtgcaactgcaacataaacggcaccagagaggagttc
tgtgatgaggcactgggcgtgtgcagctgtgaggccccagggaactgtgtgtgcaaggac
aatgtgggtggaggtggctgtgatgagtgtaagaagggaaccttgggcctatctgtttct
aacccggccggctgcagcccctgcttctgtttcggggtctcctcggactgtgaggagctg
ggtgggatggtccgggtgccgatcacactgggttctgacccagagctgctgcgtgtggtc
agtcagagtgacctccagggcagtgtagtgggggtctactaccagaacccagacatgctg
ctagacactagggacatagagacccccagcctggctggaccctactactggaggctgcct
aaacactaccagggaaacaagttgttgtcgtatggagggaatctatcctacgtggtggcg
ttctatgctatggacggggccggcctggccaactacgagcctcaggtcctgatgaggggg
ggtcatctggggaagcaggtcatctacatagacatgcctgcccctgacaacggggtaaca
acccgtcaggacgtcccactgactgagcacaagtggaagtatttcaactctgtgtcagag
aaagctgtgagtcactctgacttcatggcagtcctgagccacatcgagtacatcaccatc
aaggcatcgtatggtacagggctacagcagagcagaatatccaatatcactatggatacg
gccctagaggcggagcaagggttggaggatatggagttggcgagtctgatcgagatctgt
gaatgtccagctggctacgccggactgtcctgccaggagtgtgccccgggctactaccgc
caaccagtgactgagctgaacaagcgggggaagagacccctgatccagccctgcgtgccc
tgccgttgtaacaaccacagccaggcctgtgacctggacacaggagaatgtctgggctgc
caacacaacacagcaggggagcactgtagcgtgtgttcctcggggtactatggcgacgtg
aaaggctcagtcagggactgctcgctgtgtgcctgccccctcaaagagaacagcttcagt
cctacctgtgctctagagggagtggtgggagacttccgctgcaacgcctgcaagcccggc
tatgaggggcgctactgtgagaggtgttcagtgggttactatgggaacccgtctggtcca
ggagggaagtgtgaagagtgtctgtgtagtactgcaggttctctccatccagcgtgtgac
tctctgacgggccagtgtgaatgtaaagccggggtcaggggacgcctgtgtgaccagtgc
gaggcgagacacgtcctggacggggaccagtgtgtcttgtgtgatgatgagtgtaccagg
gtgctgctggatgacctggatgcagtagagtgctccttcctgtctgtcaacctgaccggg
gtcatcctgtcaccctacagcacactggtcaacttggagaacgacacacaagaggtcaag
attctgatgtcttcgtataggagcccagactatcacctgaccagggatgaggaggacatg
acaaacctcacccaggacatagacggactgctacagaaggctatgggtgtgtctgctgat
ggagaggaagtggcccggtccacagagaacagcgttacccagggggccaagcttctggag
tacatcaacaccattcagactgctatacaagccctggcggagcaagctggccgtctgaac
aggacagacaacgtggagatgaacgaggctaagagcagacggctaatgaagcaggtggcg
gccatgttggaaacaatcagagtggtcgacttagcccaggccaacgccagcgtctctaca
gaactctgggctgccgaggctctcctccagagggtgcagaagcacctccaggagccccag
ggagtgatagagtcccagaccctcaacatctccagcagtctgacccaacaacaacagcag
ctagtggacgcccaggcccttctgaacactgccagggagaacaacaaccacacacacacc
ctgcttggcagcatcaacaccaatctgccacagtaccagggtctgaggcaaaatgtgagc
cggctgaaccagacggcagaaacacaactggaggagactcaggacatcctggctgatgct
gtcaatctggcagaggacatgagcaacgtcacctctcaactggagggggccaaggaacag
ctggagcagtggaaccccatgttgaggaagcatgtggatgctctggtgatggagctgagg
aagcaagaggctctggagctggtctacaaggctgaggaccacgcccaagaactgagcatg
aaggcccaggctctgcagagttctctagcggaggtgatgaataccactctgaaagccacc
agtgctgcgcatgccaactctaacatcagagttaacatccagcctgcagaggagatggct
aaccgagccatcctgactgctgctatggccctcaacatgacggcccagcaagaggtgtca
cttactgatctgggatctgaggctgtgcagtgtagtgctaagatactggctgagtgtctg
gccctgaacaacagcactgggggtctcctcgctaacatcagtgatgtgacagacagaatg
gccttgttgataaataaccttcataacaccagcagacggatcccacagccagccttcctg
ctccatagcctgcccaacggcaccagtgagcaggtgctggaggccaaagagcaggctgcc
atggccaactcctccctgcagagggcactggagtacctggaggagctcagggtcagactg
gaggagtccagcaaggcagtggcccaggccaaaatcagcgtctccaacacaaaccagctg
ttctctgactcacactcaaccgccaggactgctgagtctaagctgaatgaggcagagagt
cgtaccgagaggctgtatgaccgtcttaaacccctgaagaccctgcgggaaaacctgagc
agaaacctgtctgagatcagagagatgatcaaccaggcccgcaaacaggctgcctcgatc
aaggtgtcagtgctggcagacaaagactgtgtgagggcctacaagcctgagatgtcctcc
agtaacttcaacactctaactatgaccgtcaagaccagcgagcctgacaacctgctcttc
tatatgggcagcagctccagcgtggacttcatggcagtggagatgcatcgtggcaaggtg
gggttcttgtgggatgcgggttcaggccacgccaaactggagtaccccgacatccagatc
aacaacaataagtggcatcgcatcaacgccacacgctttgggaagcacggcacgctgtca
gtccaccagctggagtcagaccccctgcccgcggtcaagaccacctcaccacgctctgct
acgatcctggatgtcaacaagtttaccctcatatttgttggtggcctgggacgccagatc
aagaagtcctccgcagtgaagatgacccagttcaagggctgtatgggggaggcgtcgctc
aacgagaagaacatcgggctgtggaactacgccgagagggagggccagtgtcgcggctgc
ttcatgagtccgcagacggaggagacgtccttccactttgatggcagtggctactcggtt
gtagagaaacccctccgctccacctccacctccatcgtcatgctgttcaagaccctctcc
cccaacggcctgctgctctacctggcctccaatgccacgagggacttcctgtccattgag
ctggtggagggccaagtgcatctaacctttgaacttggctctggtcctctgaccctctcc
tccaacaaagcctataacactggcagctggtacaagatcaccctgcagaggaacaaacgc
aaagcttatatatctgtgatggctgcagacaactcatcagacaaagagattatagaggca
gagtctcctgggtccgcctctgatctcaaccgctccgacctggacccaatctacatcggg
ggactgcccatgtctcgacctatcaggagacaagtagtagcacggtcctatgtgggctgc
atcaaaaacatggagatcgcccgctccaactttgaccttctccgagactcctatggtgtc
aagaaaggctgtgtgttagagccaatccgcagtgtgtctgtactgagagagggctatgtg
gagctgccatcaatgtctcttggctaccagggggagctgctggcctccttctccacccgc
aaccacactggcatcatcctggcaggcttcagcaaggcaggcacccgcagacgcagacag
gcacgccagcccttcctggcggtcatgctggtgtcggggcacttggaggttcacgtcaac
atggtggagggcgggagcgtccacaaggttgtggtcaaatcacgctctgggagcttcagt
gacggacaggagcactctgtcatcctacagaggaacaggaagacgatgacggtactggtg
gatgaggaccaccaggagacagtgcgcctgtcctcggagaaggcctctctgaccttctcc
tctctgtacatgggtggcctcccaccagaagagggcgtcggactgctacgaaccacttcc
tccttctacggctgcatcaggaacctggccctggatgccaagttgttggacctgtcagct
gcagtgaagtaccacaacgtggacatggacagctgtctattggaggagaggcctaagagg
gtcctcctacctgatgacactgacctggaggccgatcccacgctggacccttccagaccc
cctccaccaccccccactcagctcagcgctctcacccccggcacgctcacgtgtgcatcg
atggacaacagcacatccctcccagaggccaatcagtttggcatctccagacacagtcat
aaggtcctcaacatcaaccccaacacagtgaggaggagtttctctctggagctgtctgtg
cgtacctttgcccagagtggtttgatctactacatgtcccacgccaaccagatggactac
gccactctgcagctgctagggggtcgtctgttcttcacctgtgacaagggcagcggcccc
gccaccgcctccttccctgtgccggtcaacgacggccagtggcacacagtgaagacagac
ttcaataagaagagtgtggtaatcagtgtagacagccaggcgtcagctccagtgctggct
aaaggcaacaccctggatgtggagaacaagctgtacctgggaggactgccccattcctac
actgccaagaagataggcaacgtgacccacagcttggcgggctgcatccagaaggtgatc
ctgaacagcgttgaacttgacacccagagtccagtgtctgaacactcgactgctcactgt
ttcactgcagcccaggacgggaccttcttcagtgggagcggatatgctgctctgatgaag
gaggggtacaaggtgggctcagacgtgacggtggcgctggagttccgcagcacggcgcct
gacggggtcctcctgggggtcagcagcgccaaggtggacgccatcggcctggagcttgcc
agcggacaggcggtgttccacgtgaacaacggcgccgggcgggtgtcggccacgtcgcgg
ctgggccggtggctgtgtgacggccgctggcacaccttgctggccaagaagaccaagaac
gctcttagtctgagcgtagacggggtcacggtgctcactgacaacccccacccccagtca
acctccgctgagacgaaggacccaatctacgtgggaggcttccctgtcggagtgaaacag
aactgcctgactaccagatcgccatttcgtggttgtatgcgtaacatccgcctgatcaag
ggccacgtgatcgacatcctggacttcagtaccgcattcaccctccaaggagtgtctcca
cactcctgccccgccacataa
DBGET
integrated database retrieval system
