Oncorhynchus mykiss (rainbow trout): 110536789 Help Entry 110536789         CDS       T07259                                  Name (RefSeq) roquin-2 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism omy  Oncorhynchus mykiss (rainbow trout) Brite KEGG Orthology (KO) [BR:omy00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:omy03000]     110536789    04121 Ubiquitin system [BR:omy04121]     110536789 Transcription factors [BR:omy03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     110536789 Ubiquitin system [BR:omy04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     110536789 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-CCCH zf-RING_5 zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf-C3HC4_3 zf_CCCH_4 Prok-RING_4 zf-CCCH_UNK zf-C3HC4 zf-RING_4 RIPR_EGF-like_10th Motif Other DBs NCBI-GeneID:  110536789 NCBI-ProteinID:  XP_036792851 LinkDB All DBs Position 12:complement(13275169..13318946) Genome browser AA seq 1265 aa AA seqDB search MPVQAAQWTEFLSCPICYNEFDSSGHKPISLGCSHTVCKTCLHKLHRKACPFDQTAINTD IDLLPVNSALLQLVGAQAVESQAVTLSSAVEVGHYEVCRVCVEELALYLKPISGGKGVVT LSPSVLSRPMQRKLVTLVNCQLVEEEGRLRAVRAGRSLGERTVTELILQHQNPQQLSANL WAAVRARGCQFLGPATQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRAYEALRREHDAQIVHIAMEAGLRISPEQW SSLLYGDLIHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNSLRPHLELLANI DHNPDAAAAPWWEELESVMLAVKVVVHGLVEFIHNFSRKSHETAQPQPNSKYKTSICRDL RQQGGCPRGSNCTFAHTQDELEKNRMRNKKISGVGRPFLLAQGSMGSGLSMERGDSGEEA CTGGLKSSDNEGSGSLKEGATPSQLMPRGGDMMEEMKRERSVLNGSTGSSRSSSGSMEQK SISPPKTPVNSSSAPSPYGPGSRLECDSAHPKQAQYLMIRPLPQPPPHQPQSSELCYQDP RPPYDVQPYQPASNYYPSGIHHHKPCVARFFRSSHVPESSLPPSMAPLYSEQYPSLPPPR EHAGPSPYGPPSVPQYGPLAPAHGGYAPLYDSRHMWRPQLYHREDARSNSLPPEVLHSSV YQPPLRERYSSLDSPYCSAGEHRAALHRNSYGRFPLGCEDLFRRKQEQWAHHHHGNVNRP SQSSPVFTVDFGAEHDDGGGGQCMNCKFRGEENLSHYSPWSCGTISTCISPFEPEHHKAS AHSRSENLEVDNGERTRWLHTFEPYRRLKDEDPSIPFETYRRLKDEDPSIPFEPYCRLKD EDPSIPFEPYRRLKDEDPSIPFETYRRLKDEDPSIPFEPYCRLKDEDPSIPFEPYRRLKD EDPSIPFETYRRLKDDPSIPFEPYRRLKDDPSIPFETYRRLKDEDPSIPFEPYRRLKDED PSIPFEPYRRLKDKDPSIPFGEGPIIPFGEGPIISKWGAISRASRTGYHTTDPVQATACQ GSNSTIPINFRDYGPHIGHGNYRWSSGGSDSSSHSSFLEGEQLAALRRSFSSGEKAGAGD MLQTDYCKDTTEHQLDRDVELELSVLDVVPQDNSQQSEKPLELREPHLLTPPSSEPQRTQ TDKLSADKMEAQLLKKMAFRRSLSPGGLGSGGLSVGKLMMRTGPLRLGDMGPCPNTGPEM LLNGN NT seq 3798 nt NT seq  +upstreamnt  +downstreamnt atgccagtgcaggcggcccagtggacagagttcctctcctgccccatctgctacaacgag ttcgacagcagtggccacaagcccatcagtctgggctgctcgcacactgtgtgtaagacc tgtctccacaagctgcaccgcaaggcctgtccgttcgaccagacagccatcaacactgac atcgacctcctgccagtcaacagtgccctgctacagctggtgggagctcaggctgtggag tcccaggctgtgactctgagcagtgctgtggaggtagggcactatgaggtgtgcagggtg tgtgtggaggagctggctctctatctcaaacccatcagtggaggaaaaggtgtggttacc ctcagtccgagcgtgctcagtcggcccatgcagaggaagctggtgacactcgtcaactgt cagttggtggaggaggaggggcggttgcgggcggtgcgggcgggcaggtcgctaggggaa cgtaccgtcacagagctcatcctgcagcaccagaacccacagcagctctctgctaacctg tgggccgccgtcagagcacggggatgccagttcctggggcctgccacgcaagaggatgct ctgaagctggtactgttggcgctagaggacggctcagctctgtccaggaaagttcttgtc ctttttgtggtccagaagctggaggctcggttccctcaggcctccaaaacctccatagga catgtggtccagctactctacagggcctcctgctttaaggtgaccaagcgtgacgaggac tcgtcgctgatgcagctaaaggaggagttccgtgcgtacgaggcgctgcgtcgcgagcat gacgcccagatcgtacacatcgccatggaggcggggctccgtatctcccctgaacagtgg tcctctctgctctatggagacctcatccacaagtcacacatgcagtctatcatcgataag ctccagtccccagagtcctttgcaaagagtgtccaggagctgacgatagttctacagaga acaggagacccagccaatctgaacagcctcagaccacacctggaactactggccaacatc gaccacaacccagatgcagcggcagctccgtggtgggaggagctggagagtgtgatgctg gcggtgaaggtggtcgttcatggtcttgttgagtttatacacaacttcagtaggaagagc catgagacagcacagccgcagcccaacagcaaatataagaccagtatctgtcgagacctc cggcagcagggtggctgtccccgaggatccaactgcaccttcgcacacacacaagacgag ctagagaagaacagaatgagaaacaagaagatcagtggcgtgggccggcccttcctcctg gcccaggggagtatgggtagtggtctgagtatggagaggggcgactcaggagaggaggcc tgcactgggggcctgaagagctcagacaatgaggggtcaggatccctaaaggagggggcc acaccctcccagctcatgcccaggggaggggatatgatggaggagatgaagagggagagg tctgtacttaacggatccacaggctccagccgatcctcatctggctctatggaacagaag tctatttctcctccaaagacaccggtcaattcctcctcagctccttctccctatggccca gggtctagactagagtgtgactctgcacaccccaaacaggcccagtacctaatgataaga ccccttcctcagccccctccccaccaacctcagtcctctgaactgtgttaccaggaccca cgacctccctacgacgtgcagccctaccagccagccagtaactactacccctctgggata caccaccacaaaccctgtgtggctcgcttcttccgttccagccacgtcccagagtcctct ctgcctccctccatggcccctctgtactcagagcagtacccctccttgcccccaccacgg gagcacgctggtccctctccctacggtcccccatcggtcccccagtacgggcccctggcc ccagcccacggtggctacgctcccctgtatgacagccggcatatgtggaggccccagctg taccaccgagaggacgccaggagtaactcgctgcctcccgaggtgctgcactcctctgtg taccagcccccccttcgagagagatactcctccctggacagcccctactgctcagcgggg gagcacagagcagcactgcacaggaactcttatgggcgttttcctcttggatgcgaggat ctgttcaggcggaaacaggagcagtgggcacaccatcaccacggcaacgtgaacaggccc tcccagtcctcccccgtcttcaccgtagactttggtgcagagcatgatgacggtggtggt ggtcagtgtatgaactgtaagttccgtggagaggagaatctgtcccactactctccctgg tcctgtggaaccatcagtacctgcatcagcccctttgaaccagagcatcacaaggcctca gctcactcccgctccgaaaacttagaagtagacaatggtgaaaggacgcggtggctacac acgtttgagccctaccgccgtctgaaagacgaggaccccagcataccgtttgaaacctac cgccgtctgaaagacgaggaccccagcataccgtttgagccctactgccgtctgaaagac gaggaccccagcataccgtttgagccctaccgccgtctgaaagacgaggaccccagcata ccgtttgaaacctaccgccgtctgaaagacgaggaccccagcataccgtttgagccctac tgccgtctgaaagacgaggaccccagcataccgtttgagccctaccgccgtctgaaagac gaggaccccagcataccgtttgaaacctaccgccgtctgaaagacgaccccagcataccg tttgagccctaccgccgtctgaaagacgaccccagcataccgtttgaaacctaccgccgt ctgaaagacgaggaccccagcataccgtttgagccctaccgccgtctgaaagacgaggac cccagcataccgtttgagccctaccgccgtctgaaagacaaggaccccagcataccattt ggagaggggcccatcataccgtttggagaagggcctatcatctccaaatggggggcgata tcccgcgcctcccgtacaggataccacaccaccgacccggtccaggccacagcctgccag ggaagcaacagcaccatccccatcaacttcagagattatggtccacacatcggccatggg aactacaggtggagctccggggggtctgactcttccagccactccagtttcctagagggt gaacagctagccgcccttcggcggtccttcagcagtggagagaaggctggtgcaggagac atgctgcagactgactactgtaaagacacgacagagcatcaactggacagagacgtagaa ctggagctgtctgtactagacgttgtcccgcaggacaacagtcaacagtctgagaagccc ctggagctgagagagccccacctcctcacccctcccagcagtgaaccccagaggacacag acagacaagctgtcagcagacaagatggaagctcaactgctgaagaagatggccttcagg aggtctctctcccctggaggtctgggctcaggaggcctcagcgtggggaagctgatgatg aggaccggccctctgagactgggggacatgggcccttgccctaacacaggccctgagatg ctgctcaatgggaactga

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