Oncorhynchus mykiss (rainbow trout): 110536805
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Entry
110536805 CDS
T07259
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated protein
KO
K10632
BRCA1-associated protein [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110536805
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110536805
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110536805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRAP2
zf-UBP
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_5
RRM_1
zf-C3HC4
zf_RING_Vps8_fungal
zf-ANAPC11
Sec10_N
zf-RING_UBOX
zf-RING_11
CENPH
DUF1664
V_ATPase_I
HOOK
CC_BshC
HAUS6_N
Crescentin
Tropomyosin
DUF4795
UPF0242
DUF5798
Motif
Other DBs
NCBI-GeneID:
110536805
NCBI-ProteinID:
XP_036794609
LinkDB
All DBs
Position
12:17529711..17538777
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AA seq
519 aa
AA seq
DB search
MDDIFNEYDAKLLETYISPLGEQTGAEGEEGGGAQPLEDQPDGRGPTEGPTEVSAEGTEV
APDSPSMQLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLTEDMRRSAMLCILTVPSTMT
SHDLMKFVAPFYDVMEHMKIIRDSTPNQYMVLIKFSSQADADSFYTACNGRTFNSIEDAV
CQLVYVERAEVIKSEQGASLPVIELAELPKSTVCLERMDESVNGVLTTLCNHSFHNLCLQ
RWEDASCPVCRYCQTPEPVQENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQ
HTYAMQLTHRVWDYAGDNYFHRLVASKTDGKMVQYGCEGETCQEEKIDALQLEYSHLLTS
QLESQRIYWENKIDHLEKDIAEEISNMKAKFKETIDRCDNLEHRLGELAKDKQSMDKKCG
QLSTRVTKLGQELKEEQEINRCLRXQAQLAEDEHKARETGERKDGVIAELQEQLRDVMFY
LETQQQIGLPPETRTEIQEGHINIGAAATPAPGPSTVIG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggatgacatatttaatgaatatgatgctaaactactagaaacctacatttctcccctt
ggtgagcagactggggcagagggagaggagggtggaggagcccaacccctagaggatcaa
ccagacgggaggggtcctactgagggccctacagaggtcagtgccgagggcacagaggtg
gctccagactcgccctccatgcagcttccagaccagatttccttcttcagtggaaacccc
tcagtggagatagtccacggcatcatgcacctctacaagaccaacaagatgacatcactg
acggaggacatgcgtcgcagtgccatgctgtgtatcctgaccgtaccctccaccatgaca
agccacgacctcatgaagtttgtggcaccattttatgatgtcatggagcacatgaagatc
atacgagactccacccctaaccagtacatggtgctgatcaagtttagtagccaggctgat
gccgatagtttctacacagcgtgtaatggccgtacgttcaactccatagaggatgcagtc
tgccagctggtctatgtggagagagctgaggtcatcaagtctgagcagggcgccagtctt
ccagtgattgagctggcagagcttcctaagagtaccgtgtgtctggagaggatggatgag
tcagtgaatggggtactcactacactctgtaaccacagcttccacaacctgtgtctgcaa
cgctgggaggacgcctcgtgtcctgtgtgtcgatattgtcagaccccagagcctgtacag
gagaacaagtgctttgaatgtggagttcaggagaacctttggatctgtctgatctgtggt
catatcggctgcggtcgctacgtcagtcgtcatgcctacaaacactttgaggagacacaa
cacacgtacgccatgcagctcactcaccgtgtctgggactatgctggagataactatttt
cacaggctggtggccagtaagactgatgggaagatggttcagtacgggtgtgaaggagaa
acctgtcaagaggagaagatagatgctctgcaactagagtactctcacctgctaacgagt
cagctggagtcccagcgcatttactgggagaataagattgatcacctggagaaggacata
gcagaggagatcagcaacatgaaggccaagtttaaggagaccatagatcgatgtgataac
ctggagcatcggctgggagagctggccaaggacaaacagagcatggacaagaagtgtggt
cagttgtcgacccgtgtgacgaagcttggtcaggagctgaaagaggaacaggaaattaat
cgctgtctgagangccaggcccagttggctgaagatgagcacaaggctagagagactggc
gagcgtaaggacggggtgatagcagagctccaggagcagctgagagatgtcatgttttac
ctggagactcagcagcagataggtctgcctccagagaccaggactgagatacaggaagga
cacatcaacataggcgcagcagccactcccgccccaggaccctccaccgtcataggctga
DBGET
integrated database retrieval system
