Oncorhynchus mykiss (rainbow trout): 110537005
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Entry
110537005 CDS
T07259
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-1
KO
K06480
integrin alpha 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
omy04810
Regulation of actin cytoskeleton
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110537005
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110537005
09142 Cell motility
04820 Cytoskeleton in muscle cells
110537005
04810 Regulation of actin cytoskeleton
110537005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110537005
04515 Cell adhesion molecules [BR:
omy04515
]
110537005
04090 CD molecules [BR:
omy04090
]
110537005
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110537005
Cell adhesion molecules [BR:
omy04515
]
Integrins
Integrin alpha subunits
110537005
CD molecules [BR:
omy04090
]
Proteins
110537005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
FG-GAP_2
Cupin_7
SoxE
Motif
Other DBs
NCBI-GeneID:
110537005
NCBI-ProteinID:
XP_036792876
LinkDB
All DBs
Position
12:complement(13811384..13887135)
Genome browser
AA seq
1187 aa
AA seq
DB search
MLRQMQYLKLATALVLLPCVLSFNVDDKNGETFNGPLEDMFGYSVQQFENSEGKWVLIGS
PLAGQPAKRTGDVYKCRVGQGPNPRCIKLELPENTTIPNLHEVKENMTMGTTLVTNPQGG
FLACGPQYGYMCGQQTYISGVCTNVSSTFQVLNSFAPAVQECAKELDIVMVLDGSNSIWP
WTSIIDFLVKFLKNIEIGAKLSQVGIVSYGEEVTHNVNLSQFDTTQSLLAKVKKLPQQTG
FKTMTALGIDTARKEAFTVERGARPGVKKVMIIVTDGESHDFYNLDKVIKECEEDDIERF
GIAVLGDYNRNNRSIKEVKKFIEEIQSISSDPVGDHFFNVSDEFALLNIVDALGSRIFAL
EATSGNYTSSFEMEMSQAGFSAHTSKEGVMLGAVGAYEWNGTXVMHTNQGTVVPLNADFQ
DPLDERKESLAGYVGYAVQSASTPNGELYITGAPRYNHTGRVIVYKLDGEIITVTQVLKG
EQIGSYFGSVLQTVDVDQDSYTDILLVGAPMFMGPEREEQGQVYVYKLNEGLFEHQTTLK
PDNQTCCTSAHSNGCTIININGPCGARFGTAIAEVSDLDLDGNRDVAIGAPLENDHKGAV
YVYHGAKKTIKEKYVQRIPGPGDGVKTKFFGQSIHGVMDLNGDGIIDITIGGLGGASLFW
SKDVAELYANMTFDPNKINLQQPSEDCVLGERATVCVKTRVCFSYSVKSEKDHTNLGTAI
KYNLTLDSLRAKSRAAFVNPDDKSERKVQVTANIIDALCLEHSFAMKANLDFRDPIMISL
EFGLAEDTGPVLDGDLPTSLNKTIPLVDCGSDDKCIADLSLKAVPSIQSLVIKANKEKFH
VLITIRNSQDNAYNTKVMLSFTENINYVKVKANDKVCSLNNTKVECAVGYPFLKSNVEEV
FEILFEVNPAHVWKEIQINVTATSDSEELNTTLHDNSVRISIPVKYEAGLRFTADRHMKE
DHIIVKEGEQYPSIFNHTSVIGEEVKIIYMVKKDVNMETPPLKLRVMYPYLSPRENILLY
LTHVTSSQDVRCHIRDLINPLKINNNNTHTINPKKETLSVFLVGCKDHPCKSFVCSIPHV
NNSQVNVTFRVWKPTFIKAEFSSLHMIVNATLENLNTDLFVLSATNYARDVKIQVSKEAL
GGIPLWIIIVSILIGLLILALVIFALWKAGFFRRKSIEDMENEDMKN
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgctccggcaaatgcaatatttgaaattagcgacagcactcgtgttgctgccgtgtgtg
ttgtcatttaacgtggatgacaagaatggggagactttcaatggtccgctggaggacatg
tttggatactcagtccagcagtttgagaacagtgaggggaagtgggtgctgattggttct
cccctggccggccagccagccaaacggactggagatgtctacaaatgccgtgtgggtcaa
ggaccaaaccctagatgtatcaaactggagctgcctgaaaacacaacaattcctaattta
cacgaagtcaaggaaaacatgaccatgggaacgacgttggttaccaaccctcaaggaggc
tttctggcttgtggtccacagtatggctacatgtgtggtcagcagacatacatctctggg
gtctgtaccaacgtcagctcaaccttccaggtgctcaactccttcgccccggctgtgcaa
gagtgtgccaaagagcttgacattgtcatggttcttgacggctccaacagtatctggcct
tggaccagcatcattgatttcctggtcaagtttctgaagaatatcgaaattggagctaaa
ctgtcccaggtgggcattgtgtcatatggagaggaagtcactcacaatgtcaacctcagc
cagtttgataccactcaatccctcctggccaaagtgaagaaacttccccagcaaacaggt
ttcaagactatgaccgccctgggaattgacactgcaaggaaagaggccttcactgtggag
cgaggggcgcggccgggggtcaagaaggtcatgatcattgtgacggacggagagtcacat
gacttttataacctcgacaaggtcatcaaagaatgtgaggaggacgatatcgagaggttt
ggtatcgctgtgcttggtgattacaacaggaacaacagaagcatcaaggaggtgaagaaa
ttcattgaggagatccagtcgatctccagcgatcctgtgggagatcacttcttcaacgtg
tcggatgagtttgccttgctgaacatcgtagacgccctgggcagcaggatctttgccttg
gaggcaacgtcaggtaactacacctcgtcttttgagatggagatgtcccaggctggattt
agtgcccacacctctaaagagggtgtgatgctgggtgctgtgggggcgtatgagtggaac
gggacangtgtgatgcataccaaccagggtaccgtggttcctctaaacgcagacttccaa
gaccccctggatgaaaggaaggagagcctggcagggtacgtgggttatgccgtacagtca
gcatcaacgcctaatggtgagttatacatcacaggagcaccacggtacaaccacacaggc
agagtcatcgtctacaaactggatggggaaatcatcacagtcacacaagtactgaaagga
gagcagattggatcctactttggcagcgtgctccagacggtggatgttgaccaggactcc
tacacagacatcctgctggtgggagctcctatgttcatgggcccagagagggaggaacag
ggacaggtgtacgtctacaaactcaatgagggcctatttgagcaccagaccacgctgaag
ccagacaaccagacgtgttgtacctcggcccactccaacggttgcaccatcatcaacatc
aacggcccgtgtggcgcccgcttcggcaccgccatcgcagaggtcagtgacctagacctg
gacgggaaccgggacgtggccatcggggcgccactggagaacgaccacaaaggggcagtc
tacgtctaccatggagccaagaagaccatcaaggaaaaatatgtgcagcgtatcccaggc
cctggagacggggtgaagactaagttctttggccagtcgatccacggagtcatggatctg
aacggagacggaattatagacattaccatcggagggctgggaggggcttctctgttctgg
tccaaggatgttgctgagctttatgccaacatgacctttgacccaaacaagatcaaccta
cagcagccctctgaagactgtgtgctgggtgagagagccaccgtgtgtgtgaagaccagg
gtctgctttagctacagtgtcaagtctgagaaggaccacactaacttgggcacagccatt
aagtacaacctgactctggactctctgagggcaaagtcgagggcagcgtttgtcaaccct
gacgacaagagtgagaggaaggtccaggtcaccgccaacatcatagatgctctgtgtctg
gaacattcctttgccatgaaggctaatctggacttcagagaccccatcatgatctccctc
gagtttggtctggctgaggacacaggccccgtcctggatggagacttaccaacgtcactc
aacaaaacgattcctttggtggactgtgggagcgatgacaagtgcatagctgacctatcc
ctgaaggctgtgccaagtatacaaagtcttgtgatcaaagccaacaaggaaaagttccat
gtgctcattaccattagaaacagtcaagacaatgcctacaataccaaagtcatgctcagc
tttactgaaaacataaactacgtcaaagtcaaggccaatgacaaagtctgcagtctgaat
aataccaaagttgagtgtgctgtgggatatccattcctcaaaagcaatgtagaggaggtg
tttgagatcctgtttgaagtcaaccctgcacacgtctggaaagagattcagatcaacgta
actgcaaccagtgacagtgaggaattgaataccaccctccatgacaactctgtgagaatc
tccatccctgtgaagtacgaggctggactcagattcactgctgacaggcatatgaaggag
gaccacatcatagtgaaagagggagagcagtaccccagcatcttcaaccacaccagtgtg
ataggagaagaggtcaagatcatctatatggttaaaaaggatgtgaatatggagactcct
cctctaaagctgagggtgatgtacccgtacctatcacctagagagaacatcctgctatac
ctgacacatgtcacctcctcacaggatgtgagatgtcacatcagggacctgattaaccct
ttaaagatcaacaacaacaacacgcacaccatcaatcctaaaaaagagaccctcagtgtc
ttcctggtgggctgtaaggaccacccatgtaagtcatttgtctgctccatccctcacgtc
aacaacagccaggtcaatgttaccttcagggtgtggaagcccacctttatcaaagcagag
ttctccagccttcacatgattgttaatgccactctggagaacctgaacactgatctcttc
gtgttgagtgccaccaattacgccagagatgtgaagatccaggtctctaaagaggctttg
ggaggtataccactgtggatcattatagtcagtatcctcataggactgctgattctggca
ctggtcatcttcgctctatggaaggctggatttttcaggagaaaatccatagaggacatg
gagaacgaggacatgaagaattaa
DBGET
integrated database retrieval system
