Oncorhynchus mykiss (rainbow trout): 110537076
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Entry
110537076 CDS
T07259
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110537076
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110537076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
110537076
NCBI-ProteinID:
XP_021478503
Ensembl:
ENSOMYG00000010222
LinkDB
All DBs
Position
12:complement(17068181..17098190)
Genome browser
AA seq
1428 aa
AA seq
DB search
MVEDFPRITVKMMDPGQDLLLAALSESGICPNDLFDFDPQDAAMLSPTPQSISISALGVD
SGMEPTGVTAPPNSTGTIRHKPQPSTTTFVLNQLNQLPSLGTIVVTKPSTGGTARHTITV
TKVVHTTPSALRGSTSTLTSSTALPSAVSTVVSSSLEQIQLKDLLRTGGLKGSTMKGSSL
VELMRLKPPHDIAQPVATAIATGTKIILVSTKMMHKTAELNNGIKEVSGKDSARVWVNDD
VKVRSFSPTLKLPGMEEEAEEEEDEELGHAETYAEYMPMKLRIGLRHPDPVVETSSLSSV
NPPNVWYRMSIPEETIDRGWLSALQLEAITYASQQHETFLPNGDRASYLIGDGAGVGKGR
TIAGIIYENYLLGRKRSLWFSVSNDLKYDAERDLKDIGAKNIPVYSLNKFKYGKISSKHN
GSVKKGVIFATYSSLIGESQSGGKYKTRFKQLLHWCGQAFDGVIVYDECHKAKNVCPIGS
SKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMSRLGIWGEGTPFREFSNFIQA
VERRGVGAMEIVAMDMKLRGMYIARQLSFTGVTFKIEQVPLTTHYIKMYNKSVHLWVAAR
EKFQAAANLMDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVKNGKCVVI
GLQSTGEARTLEALEEGGGELNDFVSTAKGVLQSLVEKHFPAPDREKLFSLLGIDLPVMK
IPFPSEAAAEQKGKKRKGANIKKAEKRNRKSGGLSGNSSDDSKSEESHKDDAESDDSFKS
VSSGEDDEDDFNPFKDDSSEDEEDDPWLSGKRKGVKKCKKKKKKKKSIDPDSIHSALLAS
GLGAIRPAFTTPAVKISSTPAIAKVEVDDSCMTSQDAVEDAQQMKRDLLDQLDKLAQDLP
PNTLDELIDELGGPDNVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMD
GEKNIAIISEAASSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAP
EYVFLISELAGEQRFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVM
KSIVNLDFPLVNPPSNFEGDFYKEILHGLIGVGLIHVDDRSGILSLDKDYNNIGKFLNRI
LGMAVQEQNALFQYFSDTLAAVIQNAKKNGRYDMGILDLGSGDEKVKKMEAKKFLTPGYS
TSGHVELYTVSVERGMSWEDATHAWAEQSGPDDGFYVQIRNNKKTAILVKEVNSKKRLFL
VYRPNTGKQLKLEAYADIKKKCKKVLSDDAKQHWMDQYQSSAEICSHAYWRGNCKKVSVG
LHCEVGLRCRTYYVLCGSVLSVWTKVEGVLASVSGTNIKMQIVRLRTEDGQRIVGLIIPS
NCVSSLTNILSSSDQSQQLAVQQQQKWQQLHPQSLSHMHNMGSPHSLA
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggatttcccgaggatcacagtaaaaatgatggatcctggacaggatttgctc
ctagcagccctgagcgagagcggcatctgccctaacgacctgtttgactttgaccctcag
gatgctgcaatgctgtctcccaccccacagtccatctccatcagtgccctgggtgttgac
tcagggatggagccaacgggagtcacagctccacccaattctacaggcacaatcaggcac
aaacctcaaccctcaaccaccacatttgtcttaaatcaactgaatcagttgccatcgctg
ggaacaatcgttgtgaccaagccctcaactggaggcactgccagacataccatcacagtc
accaaggtagtccataccactccctcagccctgcgggggtccacttccacactcacctcc
tccacggctctcccctccgcagtctccacagtggtttcttccagtctagagcagatccag
ctgaaggacctgttgaggacaggcggtctgaagggcagcaccatgaagggtagtagtctg
gtggaactcatgaggctcaagccacctcacgacatcgcccagccggtcgccacagcaata
gccacaggcaccaagataatactggtctcgacaaagatgatgcataaaacagcggaactg
aacaacgggataaaggaggtgtcaggtaaagactccgctcgggtctgggtgaacgacgac
gtgaaagtgcggagcttctcacctacactaaaactcccaggaatggaggaggaggctgag
gaagaggaggatgaagagttgggtcatgctgagacatacgctgagtacatgcccatgaaa
ttgcggatcgggctgcgtcacccagacccagttgtggagacaagctccctgtccagtgtg
aatcctcccaacgtgtggtacagaatgtccataccggaggagaccatcgaccgcggctgg
ctgtctgctctgcagctggaggccatcacatacgcttcccagcaacatgaaacattcctc
cctaacggcgaccgagcgtcctatctgataggagacggggccggagtggggaagggccga
accatcgctgggataatctacgagaactacctcctgggcagaaagagatcactctggttc
agtgtttctaatgacctgaagtatgatgcagagagggatctgaaagacataggagccaag
aacattccagtctattccctcaacaagtttaagtatggtaagatctcgtccaaacacaac
ggcagtgtgaagaagggggtgatcttcgctacgtattcctctctgataggagagagccag
tctggagggaagtacaagacccgcttcaaacagctgctccactggtgtggacaggccttc
gacggagtcattgtgtatgacgagtgtcacaaagcaaaaaatgtctgtcccatcggctcg
tccaaacccaccaagactggactggccgtcctggagctgcaaaacaaactgcccaaggcg
cgggtggtgtacgctagcgccactggtgcgtctgagccccgtaacatggcctacatgagc
cggctgggcatatggggggaggggacccccttcagagagtttagcaacttcattcaggct
gtggagcgccgaggtgtgggtgctatggagatagttgccatggatatgaagctgaggggg
atgtacatcgccaggcagctgagcttcacgggtgtcacgttcaagattgagcaggttcct
ttgacaacccactacatcaagatgtacaacaagtctgtacacctgtgggtggctgcgcgg
gagaagttccaggcggctgctaacctgatggatgcagagcagcggatgaagaagtccatg
tggggtcagttctggtcggcccaccagaggttcttcaagtacctctgcattgcgtccaag
gtccgcagggtggtgcagctcgccagggaggaggtcaaaaacggaaagtgtgttgtgatt
ggtctccagtcgacaggagaggccagaacactggaggccctggaggaaggaggaggagag
ctcaacgactttgtctccaccgccaaaggtgtgctccagtctctggtagagaagcacttc
ccagctccagacagagaaaagctgttcagcctgctgggcattgacctgccggtcatgaag
atccccttccccagcgaggctgcagcagagcagaagggaaagaagaggaaaggtgccaac
ataaagaaggcagagaagaggaatagaaaatcaggtggtctgtcggggaacagctctgat
gacagcaaatcagaagagtctcataaggacgatgcggagagtgacgacagcttcaagtcg
gtcagctcaggagaagatgacgaagacgacttcaatcccttcaaggatgattccagcgag
gatgaggaggatgacccctggctgtctggaaagaggaaaggggtgaagaaatgcaagaag
aagaagaagaagaagaagagcattgacccagactctatccacagtgccttgttagcttct
ggtctgggcgccatcaggcctgctttcaccacccccgcagtcaagatctccagcacacct
gccatagccaaggtagaggtagatgacagctgtatgaccagtcaggatgctgtggaagat
gctcagcagatgaagagagatctgttggaccagctagataagctggctcaggatctacct
cccaacactctggatgaactcatagatgagctgggaggacctgacaacgtggctgagatg
actgggcgtaaaggccgggtggtcagtaacgacgatggcagcatctcctacgagtctcgg
tctgagctggatgttcctgtggagatcctcaacctcacagagaaacagaggttcatggac
ggagagaagaacatagccatcatctcggaagcggccagctcgggcatctccctgcaggct
gaccggcgtgtaaagaaccagaggaggagggtccacatgaccctggagctgccctggagt
gcagacagagccatacagcagtttgggaggacccataggtctaaccaggtgactgctcct
gagtatgtgttcctcatctctgagctggctggggaacagaggtttgcctccattgtggcc
aagagactggagagcctgggtgccctcacccatggagacagaagagcaacagagaccaga
gatctcagcaggttcaacttcgacaacaaatatggcagaaatgctctggagattgtgatg
aagtccattgttaacctggactttccgttagtgaatcctccatcgaacttcgaaggggat
ttctacaaagagatccttcatgggttgattggagtgggtctgatccatgtggacgacaga
tcagggatcctgtctctggacaaagactacaacaacatagggaagttcctgaaccgtatc
ctggggatggcggtgcaggagcagaacgctctgttccagtacttttctgacacgctggca
gccgtcatacagaatgccaagaagaatggacgctacgacatgggcattctggacctaggt
tctggggatgagaaggtgaagaagatggaagccaaaaagttcctgactccaggctactcc
acctccggacatgtggagctctacacggtgagtgtggagagaggcatgtcttgggaggat
gctacccatgcctgggctgagcagagtggacctgacgatggcttctatgtacagataagg
aacaacaagaagactgctatcttggtgaaggaggtgaacagtaagaagaggctgttcctg
gtctacagacccaacacaggcaaacagctgaaactggaggcctacgctgacatcaagaag
aagtgtaaaaaggtgctgtcagatgatgccaagcagcactggatggaccagtaccagtct
tcagctgagatctgctctcatgcttactggcgtggtaactgtaagaaggtgtcggtgggt
ctgcattgtgaggtgggtctgcgctgcaggacgtactatgtgctctgtggatctgtgctc
agtgtgtggaccaaggtggagggagtgctggcctccgtcagcggaaccaacatcaagatg
cagatcgtccgtctcaggacggaggacgggcagaggattgtgggcctgatcattccaagt
aactgcgtctcttctctgaccaacatcctgtcgtcgtctgaccagtctcagcaactggcc
gttcagcagcagcagaagtggcagcagctgcaccctcagagcctcagccacatgcataac
atgggttcaccacacagtctggcctga
DBGET
integrated database retrieval system
