Oncorhynchus mykiss (rainbow trout): 110537085
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Entry
110537085 CDS
T07259
Symbol
clip1b
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
110537085 (clip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110537085 (clip1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110537085 (clip1b)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
110537085 (clip1b)
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
110537085 (clip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Prefoldin_2
SlyX
Motif
Other DBs
NCBI-GeneID:
110537085
NCBI-ProteinID:
XP_036792961
LinkDB
All DBs
Position
12:17168354..17236967
Genome browser
AA seq
882 aa
AA seq
DB search
MSTGKPSGIKPPSKISRPTGLPTRTSPSSAASKPVPPEKSPTQDGAVDYRVGEKVWVNGN
KPGYVHFLGDTQFAPGQWVGIVLDEAIGKNDGSVAGVQYFQCEDGRGIFTRPSKLTKTAI
PEREANGGQPNPGETGAKSPSSAAAGAATTTGNSSKTPLSRTMAGNGSMSNLSETDSARK
TRRELRLGDRVLVGGTKAGVVRFMGETEFAKAEWCGVELDEPLGKNDGAVAGTRYFQCLP
RYGLFAPVHKVTRIGFPSTLAKAKASSRRRSTMKRSPSASSMSSLSSVTSSVSGKPSRAG
LLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDMERGEVAKATSHAGEVQQELSL
LRKVQEQNAMEMEDKLDQLRKLVETADRDKVELLSQLEEEKRKVEDLQFTVEEACITKGD
LETQTKLEHAHIKELEQSLLFEKTKADKLQRDLEDTRVATVSEQSRIMELEREVVALQLR
LRSSQQTGGAVSLSPEALSNLKARAQSQEKKISELNVNLDSRQKQLCSVEEDKSFLEQQL
TSLRQKLDVAEEKNKRTERTMQELEKRGEQTEKEREAQREENQRKEKELQDRLTQAAESS
KRTAHSLEQLIIEKTALEAQLEALKQQNSKFQEELRTQVRGSSESQHIGTLCKEIEVLKQ
ASLTSQNQPDMKDRETLSNQETDQDKELETLRDEIAVLRGENAMAKTLQSAVETLERDKA
QLQERVTSLEQRLLGRQASEGGDSGVPSSGDTALDQLREEKEFAEGQINFLNSVIVDLQR
KNEELKVKLKKMALAEFNGNDGTDGLEEGGSKKDKKAPPRLFCDICDCFDLHDTEDCPTQ
AQSPDSVPHSSFKGKPADQRPYCDICEAFGHSIESCQEDQTF
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaggcaagcccagcggaatcaagccccccagtaagataagcaggccaactggg
ttaccaacacgcacctccccttcctctgctgcttccaagcctgtaccccctgagaagtct
cccacccaggatggagcagtggactaccgggtgggggagaaggtgtgggtcaacggcaac
aagccaggatatgtccacttcctgggggatacacagtttgccccgggccagtgggtcggc
atcgtcctggatgaggctatcgggaagaacgacgggtcggtggcaggtgtccagtatttc
cagtgtgaggacggcagagggatattcacacggccctccaagctgaccaagacagctatt
ccggagagggaggccaatggtgggcagcctaaccctggcgagacaggggccaagtcccct
agctctgctgctgctggcgctgctactaccactggtaacagctccaagacaccgctgagt
agaaccatggccggcaatgggtcaatgtccaacctctctgagaccgactcagccaggaag
accagaagagaactaagactgggagaccgcgtgctggtggggggtactaaggcaggggtg
gtgaggttcatgggagagacagagtttgccaaggcggagtggtgtggagtggagctggac
gaacctcttgggaagaatgatggagctgtggctggaaccaggtatttccagtgcctgccg
cgatacggtctgtttgctccagtccataaggtgactcgtatcggcttccccagcaccctg
gctaaagccaaggcttcctctcggagacgctccaccatgaagaggagtcccagtgcctcc
tccatgagctccctgagctctgtcacctcctctgttagtgggaaacccagccgggctggc
ctgttgacagagacctcgtcacggtatgctcgtaagatctctggcaccacagcgctacag
gaagcactgaaggagaagcagcagcacatcgagcagctattggccgagagggacatggaa
cgcggggaggtcgccaaagcaaccagccatgctggagaggtgcagcaggaactgtctctg
ctcaggaaggttcaggagcagaatgctatggagatggaagataagctggaccagctgcgt
aaactggtggagacagcagacagagacaaggtggagctgctcagccaactggaggaggag
aagaggaaagtagaagacctgcagttcactgtggaagaggcttgcatcactaaaggtgac
ctagagacgcagaccaaactggagcatgcccatattaaggagcttgagcagagccttctg
tttgaaaagaccaaagctgacaaactgcagagggatttagaggacactagggtggcaaca
gtgtctgagcagtccaggatcatggagctggagagagaagtagtggcgctgcagttgaga
ctacgctcctcccagcagacagggggcgctgtgtcgctgtcaccagaggcgctcagcaac
cttaaggcacgggcccagtcccaggagaagaagatcagtgaactgaatgtgaatctggac
agcaggcagaaacagctatgctctgtagaagaggacaagagcttcctggaacagcagcta
accagcctgagacagaaactggacgtagcagaggaaaagaacaagaggacggaacgaacc
atgcaagagctggagaagagaggagagcagacggaaaaagagagggaggcacagagagaa
gagaaccaacgcaaagagaaagagcttcaggatagactgacgcaggctgctgagtcatca
aagaggaccgcccactcactggagcagctgatcattgagaagacagcgctagaggctcag
ctcgaggcactgaaacagcagaattccaaattccaggaagaactcagaacgcaggtgcga
ggcagctcagaaagccagcacatcggaactctgtgcaaggaaattgaggtactgaagcag
gccagtctgacgtctcagaaccagccagacatgaaagacagggaaactctgtccaaccag
gagacagatcaggacaaggagctggagactctgagggatgagattgcggtgctgcgaggt
gagaacgccatggccaagacgctgcagtctgccgtggagacgctggagagagacaaggcc
cagctacaggaacgcgtcaccagcctggagcagaggctattgggacggcaggcctctgag
ggaggggacagtggagtgccttcctcaggtgacacagctctggaccagttgagagaagag
aaggagtttgcagagggacagattaacttcctgaacagtgtgatcgtggacctacagagg
aagaatgaggagttgaaggtcaagctgaagaagatggctctggcggagttcaatggcaat
gacggcactgatggtttggaggagggtggatctaagaaggacaagaaggctcctcctcgt
ctgttctgtgatatctgtgactgttttgacctgcatgacactgaggactgtccaacccag
gcccagagccccgactcagtcccccactcttccttcaagggcaaacctgccgaccagcgg
ccgtattgcgacatctgtgaggccttcggtcactccatagagtcctgccaggaagaccag
accttctag
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