Oncorhynchus mykiss (rainbow trout): 110537166
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Entry
110537166 CDS
T07259
Name
(RefSeq) serine/arginine-rich splicing factor 9
KO
K21123
serine/arginine-rich splicing factor 9
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110537166
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110537166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110537166
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
SR proteins
110537166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
DUF2457
RRM_7
Nup35_RRM_2
RRM_9
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110537166
NCBI-ProteinID:
XP_021478675
Ensembl:
ENSOMYG00000033438
UniProt:
A0A060VXH9
LinkDB
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Position
12:complement(20933954..20938307)
Genome browser
AA seq
246 aa
AA seq
DB search
MTDGRIYVGNLPMDAQEKDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFDDPRDAEDAVY
GRNGYGFGDSKLRVEYPRSSGAKFSGPMGEGGPRGRFGPPTRRSEFRVIVTGLPQTGSWQ
DLKDHMREAGDVCFADVQRDGEGVVEFVRREDMEYALRRLDGTEFRSHQGETANIRVHGE
RGASYGRSRSRSRSPRGRGYSPPPYQSRGSPPQRYQSPPRRLVSRHSPPARRHPVPYHSP
PPRHYR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggaaggatctacgtgggaaatcttccaatggacgcccaggagaaggacata
gaggatctcttcttcaaatatggaaaaatccgggatatcgaactaaagaataacagggga
accatcccttttgcttttgttcgcttcgatgatccacgggatgcggaagacgcggtctat
ggaaggaatggatatggattcggagactccaagctgcgtgtagaataccctcgctcctct
ggtgccaaatttagtggccctatgggagaaggaggtcctagggggaggtttgggccccca
actcggagatctgagttccgggtgatagtgactggcttgccccaaaccgggagctggcag
gatctgaaagaccacatgcgtgaggcaggggatgtttgtttcgccgacgtgcagcgagat
ggtgaaggagtggtggagtttgttcgtcgggaggacatggaatacgccctgcgcagactg
gacgggactgagttccgttcccatcaaggggagacggcaaacattcgtgtccacggagaa
cgtggtgccagttacggtcgctcgcggtctcgctccagatccccccgagggcgtggctac
tcaccacctccttaccaaagcagagggtcccctccacagcgctaccagtcacccccacgc
cgccttgtgtcgcgccatagccccccagcaaggcgacacccagtaccgtaccatagcccg
cccccacgccactatcgatag
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