KEGG   Oncorhynchus mykiss (rainbow trout): 110537203
Entry
110537203         CDS       T07259                                 
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04068  FoxO signaling pathway
omy04136  Autophagy - other
omy04140  Autophagy - animal
omy04621  NOD-like receptor signaling pathway
omy04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    110537203
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110537203
   04136 Autophagy - other
    110537203
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    110537203
   04622 RIG-I-like receptor signaling pathway
    110537203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110537203
   04121 Ubiquitin system [BR:omy04121]
    110537203
   03029 Mitochondrial biogenesis [BR:omy03029]
    110537203
Membrane trafficking [BR:omy04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    110537203
Ubiquitin system [BR:omy04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   110537203
Mitochondrial biogenesis [BR:omy03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    110537203
SSDB
Motif
Pfam: APG12 ATG8
Other DBs
NCBI-GeneID: 110537203
NCBI-ProteinID: XP_036824561
Ensembl: ENSOMYG00000002850
UniProt: A0A1U9W5J8
LinkDB
Position
3:complement(10937442..10941795)
AA seq 120 aa
MSDNAESPTETQKDEPSTPQQPTEDSGMADDKKKIDVLLKAVGDTPIMKTKKWSVEKGRT
VQSLSQFISRFLKMEANEQLFIYVNQSFSPSPDQEVGVLFECFGSDGKLVLHYCKSQAWG
NT seq 363 nt   +upstreamnt  +downstreamnt
atgtctgacaacgcagagtctcctacagaaacgcaaaaagatgagccttcaaccccacaa
cagcctacggaagactcggggatggcagacgataagaaaaaaattgatgtgttgttgaag
gcagtaggagacacccccatcatgaagacaaagaaatggtcggtagagaaagggaggaca
gtgcaatcactctctcaattcatctctcgattcctcaagatggaggccaatgaacagctg
ttcatttacgtcaaccagtcattctctccctcgcctgatcaggaagtaggagtcctgttt
gaatgttttggcagcgatgggaagcttgttctacattattgtaaatctcaagcctggggt
taa

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