KEGG   Oncorhynchus mykiss (rainbow trout): 110537224
Entry
110537224         CDS       T07259                                 
Name
(RefSeq) F-box/WD repeat-containing protein 11
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04114  Oocyte meiosis
omy04120  Ubiquitin mediated proteolysis
omy04218  Cellular senescence
omy04310  Wnt signaling pathway
omy04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110537224
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    110537224
   04340 Hedgehog signaling pathway
    110537224
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    110537224
   04218 Cellular senescence
    110537224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110537224
   03036 Chromosome and associated proteins [BR:omy03036]
    110537224
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     110537224
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     110537224
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_C Beta-prop_WDR3_2nd WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd DSE1_N WD40_MABP1-WDR62_2nd Beta-TrCP_D WD40_Gbeta Beta-prop_SCAP Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_EML WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 CFAP251_N F-box-like Beta-prop_Aladin Beta-prop_SPT8 PAC11 Beta-prop_DCAF12 Beta-prop_IP5PC_F WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_VPS8 ASA1 Beta-prop_DCAF4 NBCH_WD40 TRM82_WD Beta-prop_IFT140_1st WD40_like Beta-prop_HPS5 F-box Beta-prop_WDR11_2nd Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_WDR19_1st PEP5_VPS11_N WD40_2 DUF1513 DUF4508
Other DBs
NCBI-GeneID: 110537224
NCBI-ProteinID: XP_021478779
Ensembl: ENSOMYG00000029097
LinkDB
Position
12:complement(22823888..22859633)
AA seq 525 aa
MEPEMEDKTLEQMNSTFMDSQTDERSKKSTVFKTITNGLMTGSRKRPSEGNYEKEKEVCI
QLFDQWSEADQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAENILS
FLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTT
EVPPNSYYRSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGL
RDNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLI
HHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIV
SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR
VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR
LQFDEFQIISSSHDDTILIWDFLNVSTNGQTEGRSPSRTYTYISR
NT seq 1578 nt   +upstreamnt  +downstreamnt
atggagccggagatggaggacaaaacgttggagcagatgaactccactttcatggactcc
cagacagatgaacgatcaaagaaaagcacagtgttcaagacgatcacgaacggtctgatg
acgggctcaaggaagcgaccatcggaagggaactatgagaaggagaaggaagtgtgcatc
cagctgtttgaccagtggtctgaggctgaccaggtggagtttgtggaacacctgatctca
cgcatgtgccactaccaacacggccacatcaactcctacctcaaacccatgctccaaagg
gacttcatcactgcactgccagctcagggtctggaccacatagcggagaacatcctgtcc
ttcttggatgcgcgttctctctgctcggcagagctggtgtgtaaggagtggcagagggtc
atctcagagggcatgctgtggaagaaactcatagagcgtatggtccgtacagaccctctc
tggaaaggcttgtcagagaggcaccagtgggagaagtacctgttcaaaaatcgaaccaca
gaagtcccaccaaactcctactaccgctcactttaccccaaaatcatccaggacatagag
acgatcgaggctaactggaggtgtggtcggcacaatctgcagcggatccagtgtcgttca
gagaacagtaagggggtttactgtctgcagtatgacgacgacaagatcatcagcggcctc
cgagacaactccattaagatctgggataagcagtctctggagtgtctgaagatcctgacg
ggtcatacaggctcagtgttgtgtctgcagtatgatgagcgggtcatcgtcaccggctcc
tcagactccaccgtcagggtgtgggatgtgaacactggggaggtgctgaacactctgatc
caccacaatgaggcggtcctccacttgcggttctgtaacggtctgatggtgacgtgctct
aaggaccgttccattgccgtgtgggacatggcctcacccaccgacatcagtctgcgccgc
gtgctggtcggccacagagcagcggtcaatgtggtggacttcgatgacaagtacatcgtg
tcagcatccggtgatcgtaccatcaaggtgtggagcaccagcacgtgtgagtttgttcgc
acactgaacggccataagagaggcattgcctgtctgcagtacagagaccgactagtggtc
agtggctcatctgacaacactatccggttgtgggatattgagtgtggggcatgtttgcgc
gtattggaaggccatgaagagttggtccgctgcattcgattcgacaacaaaaggatcgtt
agtggagcctacgatggtaaaatcaaagtatgggacctgcaagctgctctggaccctcgt
gcccctgccagcaccctctgtctgcgcacactggtggagcattctgggcgtgtattccga
ctacagtttgatgagttccagatcatcagcagttcccatgacgacaccatcctcatctgg
gatttcctgaacgtgtcgaccaatggacagactgagggccggtcgccctctcgcacgtac
acatacatctccagatag

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