Oncorhynchus mykiss (rainbow trout): 110537277
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Entry
110537277 CDS
T07259
Name
(RefSeq) ectodysplasin-A isoform X1
KO
K05480
ectodysplasin-A
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110537277
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
110537277
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Tumor necrosis fators
110537277
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
TNF
Motif
Other DBs
NCBI-GeneID:
110537277
NCBI-ProteinID:
XP_021478872
Ensembl:
ENSOMYG00000045676
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Position
12:complement(26145977..26210191)
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AA seq
365 aa
AA seq
DB search
MAPKSLSEKLANLEDSDLKESTCICRKQCKNCKIFLGFFVLSLSLHLVTLFCYLDLRSEV
KREILQKNREETLSPAATDMNDRYSPVFQLLDISYPADLQNRLPLGNSDESSHLKEDRDN
AVHRTKRSQQNKRLDSESHGNKRKERKKGKKGPPGAPGPLGPPGPQGPPGIPGIPGIPGN
NAMGPSGPPGPPGPAGPPGPQGPPGLQGPSGGRVRDSQPAVVHLQGQETTIQVKEDLSEG
VLRNWKMISMHHKVFKMHSRSGELEVLVDGTYFIYSQVEVYYLNFTDIASYEVMVDKTPF
LRCTRSIETGQRKFNTCYTAGVCLLRARQKISIKMVYEDTSISMTNHTTFLGSIRLGDAP
PASHS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaaatcgctgtctgaaaagttagcaaatttagaggacagtgacttaaaagag
tctacctgcatttgcaggaaacagtgtaagaactgtaaaatctttctgggattcttcgtc
ttatccctttcattgcatctagttacgcttttctgttatttggacctgagatccgaagtg
aaacgcgagattctccagaagaacagagaggagacactgtcaccggccgcaactgatatg
aatgaccgatattctccagtattccagctgttggatatcagctacccagctgatctgcag
aataggttgcctctggggaacagtgacgaaagctctcacctcaaagaagacagagacaat
gctgtccatcgcaccaaaaggagccagcagaataaacgacttgattcagaatcacatgga
aacaaacgaaaagaaaggaaaaaaggtaagaagggccctccgggtgcacctggcccccta
ggccctccagggccacaggggccacctggtattcctggcattccaggcatccctgggaac
aacgccatgggcccctcaggaccacccggacctccaggccctgctggacccccagggcca
cagggaccccctggtcttcaaggaccctcagggggcagagtcagagatagccagccggct
gtggtacatctccaaggccaggaaacaacaatacaggtcaaggaagatctttcagaaggc
gtactgagaaactggaaaatgatatccatgcatcacaaggtgttcaagatgcactcgaga
tctggggagctggaggtgttggtagatggcacctacttcatctatagtcaggtagaagtt
tactacctcaacttcactgacattgctagctatgaggtgatggtggacaagacgccgttc
ctgcgctgtacgcggagcattgagacgggacagcgcaagttcaacacctgctacacggct
ggggtgtgtctgttgcgtgcccggcagaagatctccatcaagatggtgtacgaggacacc
tccatcagcatgaccaaccacaccaccttcttggggagcatccgcctcggggatgccccc
ccggccagccactcctga
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