KEGG   Oncorhynchus mykiss (rainbow trout): 110537293
Entry
110537293         CDS       T07259                                 
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110537293
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     110537293
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C KH_N4BP1_1st zf-CCCH_2 zf-CCCH_4 UBA_N4BP1_C ATP11
Other DBs
NCBI-GeneID: 110537293
NCBI-ProteinID: XP_021478897
Ensembl: ENSOMYG00000046170
LinkDB
Position
12:complement(26963973..26971550)
AA seq 970 aa
MVLELAVPANAGPLLHRSIQHIERIFRVRVSYGSAESNCDSANVSTSNIIIVRVGEGEED
DCTKAKDYIVSLISPAHRKRERLTLALHIQLAALKSAIEYDSQAVVEVREHVVDISGGER
NVMTAWSMVEKIKMEKHPCREEAPELTEAQQPSGESEEGSSSESESEEQNQLQLNSGGCK
RKEPFSATKPHRQLCRSPCLDRPSFSQSCTLPELRIEDTKATAVLKHASDKEYQTKMEFA
LKLGYSGEQVETVLNKLGAAALINDILAELVRLGNKGEPEVQASSNTGTFVSRGGPCVKE
AVSPEVSLEDDSVDPYDNLRPIVIDGSNVAMSHGNKEVFSCLGIQLAVDWFVEKGHKDIT
VFVPAWRKEQSRPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLACDS
DGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRP
VVPEHKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRAFAKLSAVKTMSEGALAK
CGTGPTTAKGDSGSEAKRVAPKRQSDPSIRSVACEPEERLSAVRKPEANSVPSLVSALSV
PTMQPAKSHGAGALNTRSASSPVPGSLQFTHSSLEHMSSVQYPHPPILVTNSHGASVTYS
EQFPKYDSVSTDHGYYSMLSDFSNMSMSSMHNVDSFCSMEHEHGIYQRNPSQHCPEPCLS
HSNSDSFSSYGELYMSSVDSSLDESIKGQQSPAQSRLQAFSHGGFHHEALTRVQSYGPEQ
PKQGPSRKQSISHLAPHVQHPAVGARSSCPGDYPLPQNVLPSQSSQPGRSLGMTRMDSIS
DSRLYESNPMRQRRPPLCREQHASWDPLPCGSESYGYHSYPLSNSLMQPCCERVMVRSMP
DKMEQIWRSPWENPPQAERHVIPEHQYQTYRNLCNIFPAFVVHSVMEKNPHLTDPQQLAA
VIVTKLRSCH
NT seq 2913 nt   +upstreamnt  +downstreamnt
atggttttggagctggcagtgcccgcaaatgcaggcccattgcttcaccgctccatccag
cacattgagcgtattttccgggtgagggtcagctacgggtccgctgagtcaaactgcgac
agcgcaaatgtcagcaccagcaatataatcatagttcgtgtcggagagggcgaggaagat
gactgcaccaaggcaaaagattacatagtgtccttaatttcgccagctcaccgaaagcgg
gagcgtctaacgttggctttacacatacagctggctgcgctgaagtcagccatcgagtat
gattctcaggctgtggtggaggtgagggagcatgtggtggacatctccggtggcgagagg
aacgtgatgacggcatggtcgatggtggagaagatcaaaatggagaaacacccatgcagg
gaagaggcccctgagctgactgaggcccagcagcccagtggggagtctgaggagggaagc
agctcagagagcgagtcagaggagcagaatcagctgcagctgaacagcggcggctgtaag
aggaaagagcccttcagtgccaccaagcctcaccggcagctctgtcgctctccatgcctg
gaccggcccagcttctcccagagctgcactctaccagagctccgcattgaagacaccaag
gccactgcagtgcttaaacatgccagtgacaaggagtaccaaaccaagatggagtttgcc
ttgaagctgggatactcaggtgaacaggtggagaccgtgctgaacaagttaggggctgct
gcccttatcaatgacattctggctgagcttgtaaggcttggtaataaaggagaaccggag
gttcaagccagcagtaacaccggcacgttcgtctcccgtggaggcccctgtgtcaaagag
gctgtcagtccggaggtgtcacttgaagatgattctgtggatccttatgataatctcagg
cctatcgtcattgatggatcgaatgtggcgatgagtcatggaaacaaagaggtgttctct
tgccttggcatccaattggctgttgattggtttgtggagaaaggacacaaagacatcaca
gtgtttgttcctgcctggaggaaagagcagtcgagacctgacgcccccattacagaccaa
gacattttgcggaagctagagaaagaaaagatcctagtgttcaccccatctagaagagtc
caaggaaggagagtggtgtgctatgatgatcgcttcatagtgaagctggcctgtgactct
gatggcattattgtgtcaaatgacaactacagggacttacagaatgagaagccagagtgg
aagaagttcatagaggagcgactgctgatgtactcatttgtcaatgataaattcatgcca
cctgatgatcctttaggaagacatggtccaagtttagagaatttcctccgcaagcgtcct
gttgttccagagcacaaaaagcaaccctgtccatatgggaaaaaatgcacttatggacat
aagtgcaagtactatcacccagagcgtgcaaaccagcctcagcggtcagtggctgatgaa
ctgagagcgtttgccaagttgtctgctgtaaagacaatgagcgagggggccctggccaag
tgtggcactggacccaccacagctaagggggacagtggctctgaggctaaacgtgtggcc
cccaagcgccagtctgatcccagcatccgctcagtggcctgcgagccagaggagagactg
tctgctgtccgtaagcctgaggcaaattctgtgccttccctcgtgtctgccctcagtgtg
cccaccatgcagcctgctaagagccacggggctggtgccttgaacactcgatcagccagc
agcccagtacccggctccctccagttcacccacagctccctggagcacatgtctagtgta
cagtacccacacccacccatcctagtcaccaacagccatggtgcttctgtcacttacagt
gaacagtttcctaagtatgattctgtgagcacagaccacggatactactctatgcttagt
gatttttctaacatgagcatgagcagcatgcacaacgtggacagcttctgtagcatggag
catgagcatgggatttatcagcgaaatcccagccagcattgccctgagccctgcctcagc
cactctaacagtgactccttctcctcttatggggaattatacatgagctcagtggacagt
agcctggatgagagcataaaggggcagcagtctcctgcacagagcagactccaggccttc
tcccatggggggttccaccacgaggccctgacccgagtgcagagctatggccctgagcag
cctaagcagggtccaagcaggaagcagtccatatcccacctggcaccgcatgtccagcac
cctgctgttggggccaggtccagctgcccaggggactaccccttacctcagaatgtcctc
ccgtcacagtcctcacaaccgggacgctccctgggcatgacacgcatggacagcatctca
gactccaggctgtacgagagtaaccccatgaggcagcggagacccccactgtgccgcgag
cagcatgccagctgggacccgctgccctgcggcagtgaatcctatggataccactcgtac
cccctgagtaacagcctgatgcagccgtgttgtgagcgggtgatggtccgcagtatgcct
gacaagatggagcagatctggaggtctccgtgggagaacccgcctcaagccgagcgccat
gtcatcccagagcaccagtaccaaacataccgcaacctctgcaacatcttccccgctttc
gtggtgcactctgtcatggagaaaaaccctcatctaacggacccacaacaactcgctgct
gtcattgtcacgaagctgaggtcttgccattaa

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