Oncorhynchus mykiss (rainbow trout): 110537293
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Entry
110537293 CDS
T07259
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110537293
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110537293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
ATP11
Motif
Other DBs
NCBI-GeneID:
110537293
NCBI-ProteinID:
XP_021478897
Ensembl:
ENSOMYG00000046170
LinkDB
All DBs
Position
12:complement(26963973..26971550)
Genome browser
AA seq
970 aa
AA seq
DB search
MVLELAVPANAGPLLHRSIQHIERIFRVRVSYGSAESNCDSANVSTSNIIIVRVGEGEED
DCTKAKDYIVSLISPAHRKRERLTLALHIQLAALKSAIEYDSQAVVEVREHVVDISGGER
NVMTAWSMVEKIKMEKHPCREEAPELTEAQQPSGESEEGSSSESESEEQNQLQLNSGGCK
RKEPFSATKPHRQLCRSPCLDRPSFSQSCTLPELRIEDTKATAVLKHASDKEYQTKMEFA
LKLGYSGEQVETVLNKLGAAALINDILAELVRLGNKGEPEVQASSNTGTFVSRGGPCVKE
AVSPEVSLEDDSVDPYDNLRPIVIDGSNVAMSHGNKEVFSCLGIQLAVDWFVEKGHKDIT
VFVPAWRKEQSRPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLACDS
DGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRP
VVPEHKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRAFAKLSAVKTMSEGALAK
CGTGPTTAKGDSGSEAKRVAPKRQSDPSIRSVACEPEERLSAVRKPEANSVPSLVSALSV
PTMQPAKSHGAGALNTRSASSPVPGSLQFTHSSLEHMSSVQYPHPPILVTNSHGASVTYS
EQFPKYDSVSTDHGYYSMLSDFSNMSMSSMHNVDSFCSMEHEHGIYQRNPSQHCPEPCLS
HSNSDSFSSYGELYMSSVDSSLDESIKGQQSPAQSRLQAFSHGGFHHEALTRVQSYGPEQ
PKQGPSRKQSISHLAPHVQHPAVGARSSCPGDYPLPQNVLPSQSSQPGRSLGMTRMDSIS
DSRLYESNPMRQRRPPLCREQHASWDPLPCGSESYGYHSYPLSNSLMQPCCERVMVRSMP
DKMEQIWRSPWENPPQAERHVIPEHQYQTYRNLCNIFPAFVVHSVMEKNPHLTDPQQLAA
VIVTKLRSCH
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggttttggagctggcagtgcccgcaaatgcaggcccattgcttcaccgctccatccag
cacattgagcgtattttccgggtgagggtcagctacgggtccgctgagtcaaactgcgac
agcgcaaatgtcagcaccagcaatataatcatagttcgtgtcggagagggcgaggaagat
gactgcaccaaggcaaaagattacatagtgtccttaatttcgccagctcaccgaaagcgg
gagcgtctaacgttggctttacacatacagctggctgcgctgaagtcagccatcgagtat
gattctcaggctgtggtggaggtgagggagcatgtggtggacatctccggtggcgagagg
aacgtgatgacggcatggtcgatggtggagaagatcaaaatggagaaacacccatgcagg
gaagaggcccctgagctgactgaggcccagcagcccagtggggagtctgaggagggaagc
agctcagagagcgagtcagaggagcagaatcagctgcagctgaacagcggcggctgtaag
aggaaagagcccttcagtgccaccaagcctcaccggcagctctgtcgctctccatgcctg
gaccggcccagcttctcccagagctgcactctaccagagctccgcattgaagacaccaag
gccactgcagtgcttaaacatgccagtgacaaggagtaccaaaccaagatggagtttgcc
ttgaagctgggatactcaggtgaacaggtggagaccgtgctgaacaagttaggggctgct
gcccttatcaatgacattctggctgagcttgtaaggcttggtaataaaggagaaccggag
gttcaagccagcagtaacaccggcacgttcgtctcccgtggaggcccctgtgtcaaagag
gctgtcagtccggaggtgtcacttgaagatgattctgtggatccttatgataatctcagg
cctatcgtcattgatggatcgaatgtggcgatgagtcatggaaacaaagaggtgttctct
tgccttggcatccaattggctgttgattggtttgtggagaaaggacacaaagacatcaca
gtgtttgttcctgcctggaggaaagagcagtcgagacctgacgcccccattacagaccaa
gacattttgcggaagctagagaaagaaaagatcctagtgttcaccccatctagaagagtc
caaggaaggagagtggtgtgctatgatgatcgcttcatagtgaagctggcctgtgactct
gatggcattattgtgtcaaatgacaactacagggacttacagaatgagaagccagagtgg
aagaagttcatagaggagcgactgctgatgtactcatttgtcaatgataaattcatgcca
cctgatgatcctttaggaagacatggtccaagtttagagaatttcctccgcaagcgtcct
gttgttccagagcacaaaaagcaaccctgtccatatgggaaaaaatgcacttatggacat
aagtgcaagtactatcacccagagcgtgcaaaccagcctcagcggtcagtggctgatgaa
ctgagagcgtttgccaagttgtctgctgtaaagacaatgagcgagggggccctggccaag
tgtggcactggacccaccacagctaagggggacagtggctctgaggctaaacgtgtggcc
cccaagcgccagtctgatcccagcatccgctcagtggcctgcgagccagaggagagactg
tctgctgtccgtaagcctgaggcaaattctgtgccttccctcgtgtctgccctcagtgtg
cccaccatgcagcctgctaagagccacggggctggtgccttgaacactcgatcagccagc
agcccagtacccggctccctccagttcacccacagctccctggagcacatgtctagtgta
cagtacccacacccacccatcctagtcaccaacagccatggtgcttctgtcacttacagt
gaacagtttcctaagtatgattctgtgagcacagaccacggatactactctatgcttagt
gatttttctaacatgagcatgagcagcatgcacaacgtggacagcttctgtagcatggag
catgagcatgggatttatcagcgaaatcccagccagcattgccctgagccctgcctcagc
cactctaacagtgactccttctcctcttatggggaattatacatgagctcagtggacagt
agcctggatgagagcataaaggggcagcagtctcctgcacagagcagactccaggccttc
tcccatggggggttccaccacgaggccctgacccgagtgcagagctatggccctgagcag
cctaagcagggtccaagcaggaagcagtccatatcccacctggcaccgcatgtccagcac
cctgctgttggggccaggtccagctgcccaggggactaccccttacctcagaatgtcctc
ccgtcacagtcctcacaaccgggacgctccctgggcatgacacgcatggacagcatctca
gactccaggctgtacgagagtaaccccatgaggcagcggagacccccactgtgccgcgag
cagcatgccagctgggacccgctgccctgcggcagtgaatcctatggataccactcgtac
cccctgagtaacagcctgatgcagccgtgttgtgagcgggtgatggtccgcagtatgcct
gacaagatggagcagatctggaggtctccgtgggagaacccgcctcaagccgagcgccat
gtcatcccagagcaccagtaccaaacataccgcaacctctgcaacatcttccccgctttc
gtggtgcactctgtcatggagaaaaaccctcatctaacggacccacaacaactcgctgct
gtcattgtcacgaagctgaggtcttgccattaa
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