Oncorhynchus mykiss (rainbow trout): 110537435
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Entry
110537435 CDS
T07259
Name
(RefSeq) Down syndrome cell adhesion molecule homolog isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110537435
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
DSCAM family
110537435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_6
V-set_CD47
C2-set_3
Interfer-bind
fn3_2
Motif
Other DBs
NCBI-GeneID:
110537435
NCBI-ProteinID:
XP_021479151
Ensembl:
ENSOMYG00000034298
LinkDB
All DBs
Position
12:complement(30895062..31031788)
Genome browser
AA seq
2050 aa
AA seq
DB search
MWILAVIFFQCILNVFSEDLRSSLYFVNASVQEVVFASTTGTSVPCPAASVPPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFHFNPSSFSNLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVAVFKCIIPASVEAYITVVSWEKDTVSINIQTPRFLITSTG
ALYILDVQNEDGLYNYRCMTRHRYTGETRQSNSARLFVSDPSNSGPVILDGFERREVMTS
HRVELPCKASGHPAPKYRWLKDNRPLEPDSRFRQSVTGLLIERAQPSDKGSYVCEVWNSY
GNAEVVGRLQVKEPLKAVVSPRKVKGSVGSQVSLSCSVSGSEEYDLSWYRNGEIIYPGNS
VRMTGNNRENLVMAGMAKSDGGAYQCFARKGKMSAQDFVQVILEDGTPKIISSFSEKVFG
TNEFVSLFCTVKGTPEPRVIWTLDDDPVIRDSRHRIGHYTDQEGHVISHLNISQTTGPDG
GVYRCICNNSAGAVSYQARINVRGPASIRPMKNLTAIAGRDMYIHCRVIGYPYYSIKWHK
DANLLPYNHRQRAFENNGTLKLYDVQKDVDEGEYTCSVLVSPSLSTSQSVHVSVKVPPTI
HPFEFPRFSIGQRVFIPCVVMSGDQPVFITWQKDGRPIPASLGVTIDNIDFTSSLRISNL
SLLHNGNYTCIARNQAATVEHQSQLIVRVGVDPNQPTARPMLVPPKFVVQPKDQDGIYGK
AVILNCSAEGYPVPTIVWKHSKGAGVPQFQPIALNSGFRIQVLVNGSLLIKHVLEEDSGY
YLCKVSNDVGADVSKSMYLNVKIPAMITSYPNTTLATQGSEKRMSCTAHGEKPIMVRWEK
EDRIINPESSHRYVVTVKEVADEVISTLQIRPTGREDSGFFSCHAINSYGEDRGIIQLTV
QEPPDPPEVEIREVKDRTIALRWTMGFDGNSPITGFDIECKNKSGSWETAQRTKDVSPQL
NQATIIDLHPSSTYSIRMFAKNHIGKSEASNELTITTDEAAPDGPPQDVQLEAFSSQSIK
VSWRAPKKHLQNGAIRGYQVGYREFSSGGNYQFNVITMETTGDNDHSESITLDNLKKFTQ
YGVVVQASNSAGTGPSSQEVISTTLEDVPSRPPENVQATAASPEVISLSWLTPPKDALNG
ILLGFRVIYWANLPDGELGEIRNVTTSKPSLELDGLEKYTNYSIQVLTFTRAGDGVRSEQ
IFTRTKEDVPGPPAGVKAAAASNSVVFVSWLPPLKLNGIIRKYTVFCSNPHPTVSSEFEA
APDIFFYRIPNLSRNRQYSIWVVAVTAAGRGNASDIITVKPLAEAPAQILTFNGTVTTPW
MRDIVLPCKAVGDPAPTVKWLKETNGSPAPAVIDSRRIIQGNGSLAIRTVKAEDSGNYTC
VASNSFGPDKIILNLQVQVPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSED
NSEQWGNFAISPSERSYRLENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQYSK
EQELFTSINATRVKLNLIGWNNGGCPITSFTLEYRSVVSPTWTTAQRTSLIKSYILYDLA
EATWYELQMKVFNSAGSAEKRVKFATLSYDGSTIAPLVKVPTVSAGSTSSNEGLKMVTII
SCVLVGIVLVFVLLLVLRRRRREQRLKRLRDAKSLAEMLMSKNTRPADTINKQQQTMRMH
IDIPRAQLLIEERDTMETVDDRSTVLLTDNDFGETQKQKSSTVTHTVHYQSLSQATGPLV
DVSDARPGTSKSNPTARRTAKAGPAARNRYASQWTLNRPHPPVSAHTLSTDWRLPTPRVA
GSVDKESDSYSVSPSQDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITE
CFISDTSSEQMTAGTNDYTDSLTSSTPSESGICRFTASPPKPQDVSRVMNMAVPKAHRPG
GELVHLPPYLRMDFLLNRGMSCTGTGGRGGAGGEGAMGQACLEPQKSRSLKRPSRMAPPT
PTEAPQATSRASSRDPVPQWQPGSAATLPQREGSELAQAAKLSTSQESLLDSRGHLKQTN
NPYAKSYTLV
NT seq
6153 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggctgtcatctttttccagtgcatcttgaatgttttcagtgaagattta
cgttccagcttatattttgtcaatgcatctgtgcaagaggtagtgtttgccagcaccaca
gggacctcggtgccctgtcccgccgcgagcgtgccccccgcctcgctgcgctggtacctg
gccaccggagaggagatctacgatgtccccgggatccgccacgtgcacccaaatggcacc
cttcagatcttccacttcaacccctccagcttcagcaacctcatacatgacaacacctac
tattgcacagcggagaacccctcagggaaaatcaggagccaagatgtccatattaaggct
gttctacgagagccctacacggtccgcgtggaggaccagaaagccatgagaggcaatgtg
gcagtgttcaagtgcattatcccagcctcagtggaggcctacatcaccgttgtgtcctgg
gaaaaagacacagtgtcaatcaacatccagacgcctcggttcctcatcacctccacggga
gccctgtacatcttggacgtgcagaatgaggacggattgtataactacaggtgtatgaca
cgccaccgctacacaggagagaccaggcagagcaacagcgcacgcctctttgtgtcagac
ccctccaactcggggccggtcatcctggatggttttgagcgtcgcgaggtgatgacatca
caccgggtggagctgccgtgcaaggcgtctggtcacccggccccgaagtaccgctggctg
aaggacaaccgtccgctagagccggacagccgcttcaggcagagtgtgacgggcctgttg
atagagagggcgcagcccagcgacaagggaagctacgtgtgtgaagtgtggaacagctat
ggcaatgcagaggtagtggggaggctgcaggtcaaagagcccctgaaggcagtggtcagc
ccgaggaaggtgaaaggcagcgtaggtagccaggtgtcactgtcgtgtagcgtgagtggc
tcggaggagtacgacctgtcctggtaccggaatggagaaattatataccctgggaacagt
gttcgtatgactggcaacaaccgggagaacctggtcatggctgggatggctaagagtgat
ggaggagcctaccagtgcttcgctaggaaaggcaagatgtccgcccaggactttgtccag
gtcatcctggaagacggcacgcccaagataatctcttccttcagtgagaaagtgtttgga
accaacgagtttgtgtcactgttctgcacggtgaaaggcacaccagagcccagggtgata
tggacgctggacgacgatccggtcatcagggactcccgccaccgcattggccactacacc
gaccaggagggccatgtgatcagccacctgaacatcagccagacaacaggaccagacggg
ggtgtctaccggtgcatctgcaacaattcggccggggcggtctcctaccaggcgcgaata
aacgtaagagggcctgccagcatacgaccaatgaaaaacctcaccgccattgctgggcgg
gacatgtacattcactgccgcgtcattggctacccgtactactccatcaaatggcacaag
gacgccaacctgctcccctataaccaccggcagcgggcatttgagaacaatggcacgcta
aagctgtatgatgtacagaaggatgtggatgagggagagtacacgtgtagcgtgctggtc
tcaccttctctctccaccagccaaagtgtgcacgtcagtgtgaaagttccccccaccatc
catcccttcgagttccctcgtttctctattggccaacgtgtgttcattccgtgcgtggtg
atgtcaggtgatcagcctgtcttcatcacctggcagaaggacggtcggccaatcccggcc
agcctcggcgtaacgatcgacaacatagacttcaccagctccctacgtatctccaacctg
tctctcctgcacaatggcaactacacctgcatcgcacgcaaccaggccgccaccgtggaa
caccagagtcagctcatcgtcagggttggagtggatccaaatcaacctaccgctaggcct
atgttggtccctccaaagtttgtggtgcagcccaaggaccaggacggcatctatggaaaa
gctgtgatcctcaactgctctgcagagggataccccgtccctaccatagtgtggaagcac
tccaaaggtgcgggggttccccagttccagcctatagccttgaactcgggcttccgtatc
caggtactggtcaacggctctctgctcatcaaacatgtgctggaggaggacagtggctac
tacctgtgtaaggtcagcaatgacgtgggagctgatgtcagcaagtccatgtacctcaac
gtcaaaatcccagccatgatcacgtcgtaccccaacaccacgctggccacgcagggcagt
gagaagaggatgagctgcacggcccacggggagaaacccatcatggtgcgctgggagaag
gaagatcgcatcatcaacccagagagcagccaccgctacgtggtcaccgtcaaagaggtg
gccgatgaggtcatctccaccctgcagatccgacctacagggagggaagactctggcttc
ttctcctgccatgccatcaactcctatggtgaagaccgagggattattcagctaacagtg
caagagcccccggaccctcctgaggtggagatcagagaggtgaaggacaggaccatcgcc
ctccgctggaccatgggctttgacggaaacagcccaatcacgggcttcgacattgagtgc
aagaacaaatcaggctcctgggaaacagcccaaaggaccaaagatgtgtctccccagctc
aaccaggccaccatcatagacctgcacccctcctccacctacagcatccgcatgttcgcc
aagaaccacatcggcaagagtgaggccagcaatgaactcaccatcaccacagacgaagca
gcccctgatggtcccccacaagatgtgcagcttgaagctttctcctctcagagcatcaaa
gtctcctggagggctcctaagaagcacctccagaacggagcgatccgaggctaccaggtg
ggctacagggagttcagctccgggggaaactaccagttcaatgtcatcaccatggagacg
acgggggacaacgaccacagtgagagcatcaccctggacaacctgaagaagttcacccag
tatggggtagtggtgcaggccagcaacagcgctgggactggaccctcctcccaggaggtc
atctctaccacactggaggatgttcccagccgacctccagagaacgtccaggccacggcg
gcgtccccagaggttatctctctgtcctggctgacccctcctaaagatgccctcaacggc
atcctgcttggcttcagagtcatctactgggccaacctgccagatggagagctgggggag
atccgtaacgtgaccacctctaagccatctctggagctggatggtctggagaagtacact
aactacagcatccaggtgctgaccttcacccgggcaggggatggggtgcgcagcgagcag
atcttcacccgcaccaaggaggacgtccctggtcctccggctggcgtgaaggcagcggcg
gcatctaactcagtggtgtttgtgtcgtggctccctcctcttaaactcaacggcatcatc
aggaaatacactgtcttctgctctaacccacaccccacggtgagcagtgagtttgaagca
gctccagacatcttcttctaccgtatccccaacctgagcaggaaccgtcagtacagcatc
tgggtggtggccgtcaccgcagccggccgcggaaacgccagcgacatcatcaccgtcaag
cccctggccgaggctcctgctcagattctgacgttcaacggcaccgtgaccacaccctgg
atgagggacatcgtgttgccctgtaaggcggtgggcgacccagcccccacggtcaagtgg
ctcaaggagaccaacggaagccccgcccctgctgtgatcgacagtagacgcatcatccag
ggcaatggcagcctagccatccgcacagtgaaagctgaggattctgggaactacacctgt
gtggctagcaacagttttgggccggataaaatcatcctcaacctgcaggttcaagttcct
ccagaccagcctcgtcttaccgttaccaagacgaccaccacatctatcactctgtcctgg
ataccaggagacaacggaggcagctccatcagaggctacatcctgcaatactcagaggac
aacagtgagcagtggggcaactttgccatcagccctagtgagcgttcctatcgcctggag
aacctgaagtgtggcacctggtacaaatttacactgacggcacagaatgctgtggggcca
gggcgaatcagtgagatcatcgaagctaagactcatgggaaagaaccccagtactctaaa
gaacaggagctcttcaccagtattaatgccacgcgtgtcaagctcaacctgattggctgg
aacaacggcggctgtccaatcacatccttcacgttggagtaccgttcggtggtgtctccc
acatggaccacggcccagcgcacctctctgatcaagagctacatcctgtatgacctggcc
gaggccacctggtacgaactgcagatgaaggtgttcaacagcgccggctcagcagagaag
agggtcaagttcgccacactcagctacgacggcagtaccatcgctcccctggtgaaggtc
ccgacggtgagtgcgggcagtacgtccagtaacgagggtctgaaaatggtgaccatcatc
tcatgtgttctggtgggcatcgtgctggtcttcgtcctgctacttgtcctcaggaggcgg
aggcgggaacagagactgaagaggcttagagatgctaaaagtttagccgagatgctgatg
agtaaaaacacacgacctgcagacaccatcaacaagcagcagcagaccatgagaatgcac
atcgacatcccccgagcccagctgctcatagaggagagagacaccatggagacagtcgat
gacaggtccacagtgctactgactgacaatgactttggggagacccagaaacagaagtcg
tctacggttacccacactgtccactaccagtccctgtcacaggccaccggacctctagtg
gatgtatctgacgctaggccaggaaccagtaagtccaaccccacagcccgccgcacagcc
aaagcaggccctgccgcacgcaaccgctacgctagccagtggaccctgaaccgaccacac
ccgccagtctcggcccacaccctaagcactgactggaggctgcccacgccacgggtggcc
ggatctgtggataaggagagtgacagctacagtgtcagcccatctcaggacacagaccga
gcacggagcagcatggtgtccacagagagcgcgtcatccacctatgaggagcttgcgcgg
gcctacgagcacgccaaaatggaggagcagctgcgccacgccaagttcaccatcacagaa
tgcttcatctcggacacgtcgtcggagcagatgacggcaggcaccaatgactacacagac
agcctgacctccagcacgccctccgagtcaggcatctgcaggttcaccgcctccccgccc
aagcctcaggacgtcagccgagtcatgaacatggccgttcccaaggctcacagacccggg
ggcgagcttgtgcacctgcctccttacctgcgcatggacttcctgctgaaccggggcatg
tcgtgcacgggtactggagggaggggtggtgccgggggggagggggccatgggtcaggcc
tgtctggaaccccagaagagtcgctccctgaagcggccgtcgcgtatggcgccccctaca
cccacagaggccccccaggctaccagcagggccagcagcagggacccagtgccccaatgg
cagcccggctcagccgccaccctgccccaaagagagggctcagagctggcccaggccgcc
aagctcagcacctcccaggagtccctactggactcacgaggacatctcaaacagaccaac
aacccctacgcaaagtcctatacgctagtataa
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