Oncorhynchus mykiss (rainbow trout): 110537450
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Entry
110537450 CDS
T07259
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110537450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110537450
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110537450
Intermediate filaments
Intermediate filament-binding proteins
110537450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
110537450
NCBI-ProteinID:
XP_021479183
Ensembl:
ENSOMYG00000037752
LinkDB
All DBs
Position
12:31864334..31889455
Genome browser
AA seq
1607 aa
AA seq
DB search
MLMGAGRDTARDEAQKLHRKWLKHQAFMTELARNKEWLAKIEQEGQELIDEKPELRSVVQ
QKLEEIRECWTDLESTTKAKARALFENNKPEPVVKSYSDLDHQLSGLEKQPPQLEQAHHL
PTFNEQLHKFQSQMGDLYKDVGELGSFQGVCLPQRGSLEKGGEGEGGEQPAVVETRIVRL
IEPLKERRRILLASKEMHQVAQDLEEEILWIQERLPLASSKDYGNNLQSVQQHVKINQTL
QRDLQGRRARVEEVLDRAGIIASLRTPEVDFVREGAGHVRQLWEVLRLEAERRTVMLDVV
LQAQQYYSEAAKVESWLAGQKLHLISEEKGMDEASTLQLLKEHLALEAMVENYAETVGML
SQQCQRQLELAHPDSEGITKQQSHIDRLYVSLKDMVEHRKTKLEQQYWMYQLNREVEELE
KWITEREAVASSTELGQDLEDVTMLQEKFTKFCSETNSIGQQRMEQVNKMVNEMIDCGHT
DAATIAEWKDGLNESWADLLELMETRGQMLTASYQLHKFFTDCKEVLVQIAGKMRQLPEV
RACQASIANPATLQRLMRSFEHALQLLVSQVRQLQENAAQLRAIYAGEKAEAIMSKEQEV
MSAWKELLVSCEASRVQVTSVTDKVQFFSVVREHLMWMEGIMGQIGGDDPRDSSSAEVMM
KQHGELKAKMDGRSKTLQQCVELGKILLAAGNPAAEEIKEKLDTLLAKQKDLSERWDKHQ
EKLQRKKDQFQYAQETVKAEAWLKAKEPLINSSSNSSQAGGAVGEAQAQTDEVEQLILRH
EAFRKAAATWKERFSSLRQLSNAEKLREEQSSKPAPMPLSSRRMFPSSCLTPTFPLATST
LLRQTVQLHIEPRPKQTSLGMAASASTASQRLGSTMASYTPVMNGSSYHGLDHQSSSGGL
ESSNYPGLNHQACGGVDSSSSYLGVNHQTALPPVDSSGYLGLNHQSSGGMVSPGYLPQNQ
SSGGMGSPGYLPQNQSSGGMGSPGYLPQNQSSGSMGSLGYLPQNQSSGGTGSPGYLTQNQ
SSGGLGSSGYLPQNQSIGGIVSPGYLAQNQHSGGMGSSGYLAQNLSSGSMGSSGYLAQNH
QSSGGMGSSGYLAQNQGSGVMGSSGFLAQNQCSGIMGSSGYLAQNQNSGGMGSSGYLAQN
LSSGGMGSSGYLAQIQGSGGKGSSSYLPQSGGVMDPKMAYAWQHLKADCMQPRINHIHKA
VNPLLEASRAQREQFGDIPMVDMIGPESGLELLHGRLQRDPRGSRSDPQMDHLRREREYK
LGRQTSSEQEIQARLNELPMIVRQERYRRRLERQSSSEQEGSGKARTPKQDDSSDMESAK
EGSDKRSTEKRATTMAEIVEQAQEREAAQARGETYRPTSSLSAPVTYERPRARDRPKPRR
RPRPKEPEEKRRSRSAPAQSPAQLLPPSHTAHNEGFLYRKHDFDGQQKSPSSKSWVNLYC
VLSKGEIIFYKDAKSITTPYNEETPLDLSVCICDSTMGYKKKKNVFVIKKNDGNDYIFHA
KDEEDLKAWVTNITTSITEHEEIAKWDKPTTSSTDPDRSERKEKSEGDADARSERSEMGG
EVEEEERSEKGEGSEKTGEGSEKADTSERGEMAEGGAGGSSTSGKIK
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgggtgcgggacgagacacggcgcgggatgaggcccagaagcttcaccggaaa
tggctgaagcaccaggccttcatgaccgagctggcccgcaacaaagaatggctggccaag
atagagcaggagggtcaggaactgatcgatgagaagccggagctgcgttcggtggtgcag
cagaagctggaggagatcagggagtgctggacggacctggagagcaccaccaaggccaag
gcccgggctctgtttgagaacaacaagccagagccggtggtgaagagctactcagacctg
gaccaccagctctctggcctggagaaacagccccctcagctggagcaggctcaccatctg
cccaccttcaatgagcagctgcataaattccagtctcagatgggggacttgtacaaggac
gtaggggaactagggtccttccagggggtgtgcctcccccagcgaggcagcctggagaaa
ggcggggaaggagaagggggtgagcagccagctgtggtggagacccgcatcgtgcgcctc
atcgagcccctgaaggagagacgtcgcattctgctggcctccaaggagatgcatcaggtc
gcccaggacctggaggaagagatactgtggatccaggagcggcttcctctggcttcctct
aaggattacggcaacaacctgcagagtgttcagcagcatgtcaagatcaaccagacgctg
cagagggatctgcagggtcgccgggcgcgggttgaggaggtgttggaccgggcggggatc
atcgcctctctgcggacccccgaggtggactttgtgcgcgagggggcagggcacgtgcgt
cagctttgggaggtgctaaggctagaggcggagaggaggactgtgatgctggatgtggtg
ctgcaggcccagcagtattacagcgaggcggccaaagtcgagtcctggctggcaggccag
aaactgcacctcatcagcgaggagaagggtatggacgaagcaagcaccctgcagctactg
aaggagcacctggccttggaggcgatggtggagaactacgctgagacagtgggcatgctc
tcccagcagtgtcagaggcagctggaactggcacacccagacagtgaggggatcaccaag
cagcagtcccacatagaccgtctgtacgtgtctctgaaggacatggtggagcacaggaag
accaaactggagcagcagtattggatgtaccagctcaacagagaggtggaggagttagag
aagtggatcactgagcgggaggccgttgccagctccactgagctgggccaagacctggaa
gatgtcacgatgctacaagaaaaattcaccaagttctgctcagagaccaacagcataggc
caacagaggatggagcaggtgaataagatggtgaacgagatgatagactgcggccacacg
gacgcggccacaatcgctgagtggaaggatggactgaacgagtcatgggccgacctactg
gagctcatggaaacccgagggcagatgctaacagcatcataccagctgcacaagttcttc
accgactgcaaagaggtcttggttcagattgctgggaagatgaggcaactaccagaggtg
agggcgtgccaagccagcatcgccaacccggccacgctgcagaggctcatgcgctctttt
gagcacgccctccagctgcttgtctcacaggtaaggcagctgcaggagaacgcggcccag
ctgagggccatctacgccggggaaaaggcagaggccatcatgagcaaggaacaggaagtg
atgtcagcatggaaggagttgctggtttcctgtgaggccagtcgcgtgcaggtcacctcg
gtgacagacaaggtccagttcttctcagtggtgcgtgagcatctcatgtggatggaaggc
atcatgggacagattggaggggacgaccccagggattcgtcctctgcggaggtgatgatg
aaacaacatggtgagctgaaagccaagatggacggccgcagcaagaccctacaacagtgt
gttgagctgggaaagatcctgttggccgcaggcaacccagcagctgaggagataaaggag
aagttggacacactcctggctaagcagaaggatctctctgagagatgggacaaacaccag
gaaaagctacagcgcaagaaggatcagttccagtatgcccaggagacggtgaaggcggag
gcctggctaaaggccaaggagccgctaatcaactctagctccaactccagtcaggctggg
ggtgctgtaggagaggcccaggctcagactgacgaggtggagcagctcatcctccgccac
gaggccttccgtaaggctgcagctacctggaaggagcgcttcagctcactgagacagctc
tccaatgcagagaagctgagagaagaacagagcagcaagcctgccccaatgccactctcc
agtcggaggatgttcccatcgtcctgcctcactccgacctttccccttgctacctcaact
ctgctgaggcagacggtccagctgcatattgagcccaggcccaagcagactagtctaggg
atggctgcctctgcctccactgcatcccagaggttgggttctaccatggccagctacact
cctgtcatgaatggctccagttaccatggactggaccatcagagcagcagcggggggttg
gagagttctaactaccctgggctaaaccatcaggcctgtggaggtgtggacagcagctcc
agttaccttggagtgaaccatcagactgccctcccgccagtggatagttctggctacctt
ggactgaaccatcaaagcagtgggggtatggttagtccaggctacctacctcaaaatcaa
agtagtggtggtatgggtagtccaggttacctgccgcaaaatcaaagcagtgggggtatg
ggtagtccaggttacctgccgcaaaatcaaagcagtgggagtatgggtagtctaggctac
ctgccgcaaaatcaaagtagtgggggtacgggtagtccaggctacctaacgcaaaatcaa
agtagtgggggtttgggtagttcaggctacctgccgcaaaatcaaagtattgggggtata
gttagtccaggctaccttgcgcaaaatcaacacagtggtggtatgggtagctcaggctac
cttgcacaaaatctaagtagtgggagtatgggtagttcaggctacctggctcaaaaccat
caaagcagtggtggtatgggtagttcaggctacctggctcaaaaccaaggtagtggggtt
atgggtagttcaggcttccttgcgcaaaaccaatgtagtggaattatgggtagttcaggg
taccttgcgcaaaatcaaaatagtggtggtatgggtagctcaggctaccttgcacaaaat
ctaagtagtgggggtatgggtagttcagggtaccttgcgcaaatccaaggtagtggaggt
aagggtagttctagctatctgcctcaaagcggtggggtcatggaccccaaaatggcatat
gcgtggcagcatctgaaagccgactgcatgcagcccaggatcaaccatatccacaaggct
gtcaaccccctcctggaggccagcagggcgcagagggaacagtttggggacatccccatg
gtagacatgatcgggccagagtccggcctggagctcctccatggcaggcttcaaagggac
ccccgcggcagccgctccgacccccagatggaccacctgcggcgggagagggagtacaag
ctgggccgccagacctccagtgaacaggagatccaggcgcggctcaacgagctgccaatg
atcgtgcgtcaggagcgctataggcgacgcctggagaggcagtcgtccagcgagcaggag
ggcagtgggaaggcgaggacaccaaagcaggacgactccagcgacatggagtcagccaag
gaaggctctgacaaacgctcaacagagaagagagccaccacaatggctgagattgtggag
caggcccaggagagagaggcagcacaagccagaggggagacataccgccccaccagcagc
ctctcagcacccgtgacctacgagcgcccgcgcgcccgagaccgccccaaaccccgcagg
agaccccgccccaaagagcctgaggagaagcggcgctctcgctcggctccagcccagagt
ccagcgcaactcttgccgccctcacacactgcccataacgaaggcttcctgtaccgcaaa
cacgactttgatggccagcaaaagagtcccagcagtaagtcctgggtgaacttgtattgc
gtgttgtcaaaaggagagatcattttctacaaggacgccaagagcatcaccacaccttac
aatgaagaaaccccactcgacctgagcgtctgtatatgtgatagcaccatgggatacaag
aagaagaaaaatgtcttcgttatcaagaaaaatgatggcaatgactatattttccatgca
aaggatgaggaggacctgaaggcttgggtaactaacatcaccaccagtataactgaacac
gaggagatcgccaagtgggacaaacccacgacctcgtccacagatcccgaccgctcggag
aggaaagagaagtcagagggtgacgcagatgccaggtcagagagatctgagatgggagga
gaggtggaggaggaagagaggtctgagaagggagaggggtccgagaagacaggcgagggc
tccgagaaggcagacacgtcggagaggggtgagatggcagagggaggggcagggggctcc
agcacgtcagggaagatcaaatga
DBGET
integrated database retrieval system
