Oncorhynchus mykiss (rainbow trout): 110537450
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Entry
110537450 CDS
T07259
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04517
IgSF CAM signaling
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110537450
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110537450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110537450
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110537450
Intermediate filaments
Intermediate filament-binding proteins
110537450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
PH_4
Motif
Other DBs
NCBI-GeneID:
110537450
NCBI-ProteinID:
XP_021479183
Ensembl:
ENSOMYG00000037752
LinkDB
All DBs
Position
12:31864334..31889455
Genome browser
AA seq
1607 aa
AA seq
DB search
MLMGAGRDTARDEAQKLHRKWLKHQAFMTELARNKEWLAKIEQEGQELIDEKPELRSVVQ
QKLEEIRECWTDLESTTKAKARALFENNKPEPVVKSYSDLDHQLSGLEKQPPQLEQAHHL
PTFNEQLHKFQSQMGDLYKDVGELGSFQGVCLPQRGSLEKGGEGEGGEQPAVVETRIVRL
IEPLKERRRILLASKEMHQVAQDLEEEILWIQERLPLASSKDYGNNLQSVQQHVKINQTL
QRDLQGRRARVEEVLDRAGIIASLRTPEVDFVREGAGHVRQLWEVLRLEAERRTVMLDVV
LQAQQYYSEAAKVESWLAGQKLHLISEEKGMDEASTLQLLKEHLALEAMVENYAETVGML
SQQCQRQLELAHPDSEGITKQQSHIDRLYVSLKDMVEHRKTKLEQQYWMYQLNREVEELE
KWITEREAVASSTELGQDLEDVTMLQEKFTKFCSETNSIGQQRMEQVNKMVNEMIDCGHT
DAATIAEWKDGLNESWADLLELMETRGQMLTASYQLHKFFTDCKEVLVQIAGKMRQLPEV
RACQASIANPATLQRLMRSFEHALQLLVSQVRQLQENAAQLRAIYAGEKAEAIMSKEQEV
MSAWKELLVSCEASRVQVTSVTDKVQFFSVVREHLMWMEGIMGQIGGDDPRDSSSAEVMM
KQHGELKAKMDGRSKTLQQCVELGKILLAAGNPAAEEIKEKLDTLLAKQKDLSERWDKHQ
EKLQRKKDQFQYAQETVKAEAWLKAKEPLINSSSNSSQAGGAVGEAQAQTDEVEQLILRH
EAFRKAAATWKERFSSLRQLSNAEKLREEQSSKPAPMPLSSRRMFPSSCLTPTFPLATST
LLRQTVQLHIEPRPKQTSLGMAASASTASQRLGSTMASYTPVMNGSSYHGLDHQSSSGGL
ESSNYPGLNHQACGGVDSSSSYLGVNHQTALPPVDSSGYLGLNHQSSGGMVSPGYLPQNQ
SSGGMGSPGYLPQNQSSGGMGSPGYLPQNQSSGSMGSLGYLPQNQSSGGTGSPGYLTQNQ
SSGGLGSSGYLPQNQSIGGIVSPGYLAQNQHSGGMGSSGYLAQNLSSGSMGSSGYLAQNH
QSSGGMGSSGYLAQNQGSGVMGSSGFLAQNQCSGIMGSSGYLAQNQNSGGMGSSGYLAQN
LSSGGMGSSGYLAQIQGSGGKGSSSYLPQSGGVMDPKMAYAWQHLKADCMQPRINHIHKA
VNPLLEASRAQREQFGDIPMVDMIGPESGLELLHGRLQRDPRGSRSDPQMDHLRREREYK
LGRQTSSEQEIQARLNELPMIVRQERYRRRLERQSSSEQEGSGKARTPKQDDSSDMESAK
EGSDKRSTEKRATTMAEIVEQAQEREAAQARGETYRPTSSLSAPVTYERPRARDRPKPRR
RPRPKEPEEKRRSRSAPAQSPAQLLPPSHTAHNEGFLYRKHDFDGQQKSPSSKSWVNLYC
VLSKGEIIFYKDAKSITTPYNEETPLDLSVCICDSTMGYKKKKNVFVIKKNDGNDYIFHA
KDEEDLKAWVTNITTSITEHEEIAKWDKPTTSSTDPDRSERKEKSEGDADARSERSEMGG
EVEEEERSEKGEGSEKTGEGSEKADTSERGEMAEGGAGGSSTSGKIK
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgggtgcgggacgagacacggcgcgggatgaggcccagaagcttcaccggaaa
tggctgaagcaccaggccttcatgaccgagctggcccgcaacaaagaatggctggccaag
atagagcaggagggtcaggaactgatcgatgagaagccggagctgcgttcggtggtgcag
cagaagctggaggagatcagggagtgctggacggacctggagagcaccaccaaggccaag
gcccgggctctgtttgagaacaacaagccagagccggtggtgaagagctactcagacctg
gaccaccagctctctggcctggagaaacagccccctcagctggagcaggctcaccatctg
cccaccttcaatgagcagctgcataaattccagtctcagatgggggacttgtacaaggac
gtaggggaactagggtccttccagggggtgtgcctcccccagcgaggcagcctggagaaa
ggcggggaaggagaagggggtgagcagccagctgtggtggagacccgcatcgtgcgcctc
atcgagcccctgaaggagagacgtcgcattctgctggcctccaaggagatgcatcaggtc
gcccaggacctggaggaagagatactgtggatccaggagcggcttcctctggcttcctct
aaggattacggcaacaacctgcagagtgttcagcagcatgtcaagatcaaccagacgctg
cagagggatctgcagggtcgccgggcgcgggttgaggaggtgttggaccgggcggggatc
atcgcctctctgcggacccccgaggtggactttgtgcgcgagggggcagggcacgtgcgt
cagctttgggaggtgctaaggctagaggcggagaggaggactgtgatgctggatgtggtg
ctgcaggcccagcagtattacagcgaggcggccaaagtcgagtcctggctggcaggccag
aaactgcacctcatcagcgaggagaagggtatggacgaagcaagcaccctgcagctactg
aaggagcacctggccttggaggcgatggtggagaactacgctgagacagtgggcatgctc
tcccagcagtgtcagaggcagctggaactggcacacccagacagtgaggggatcaccaag
cagcagtcccacatagaccgtctgtacgtgtctctgaaggacatggtggagcacaggaag
accaaactggagcagcagtattggatgtaccagctcaacagagaggtggaggagttagag
aagtggatcactgagcgggaggccgttgccagctccactgagctgggccaagacctggaa
gatgtcacgatgctacaagaaaaattcaccaagttctgctcagagaccaacagcataggc
caacagaggatggagcaggtgaataagatggtgaacgagatgatagactgcggccacacg
gacgcggccacaatcgctgagtggaaggatggactgaacgagtcatgggccgacctactg
gagctcatggaaacccgagggcagatgctaacagcatcataccagctgcacaagttcttc
accgactgcaaagaggtcttggttcagattgctgggaagatgaggcaactaccagaggtg
agggcgtgccaagccagcatcgccaacccggccacgctgcagaggctcatgcgctctttt
gagcacgccctccagctgcttgtctcacaggtaaggcagctgcaggagaacgcggcccag
ctgagggccatctacgccggggaaaaggcagaggccatcatgagcaaggaacaggaagtg
atgtcagcatggaaggagttgctggtttcctgtgaggccagtcgcgtgcaggtcacctcg
gtgacagacaaggtccagttcttctcagtggtgcgtgagcatctcatgtggatggaaggc
atcatgggacagattggaggggacgaccccagggattcgtcctctgcggaggtgatgatg
aaacaacatggtgagctgaaagccaagatggacggccgcagcaagaccctacaacagtgt
gttgagctgggaaagatcctgttggccgcaggcaacccagcagctgaggagataaaggag
aagttggacacactcctggctaagcagaaggatctctctgagagatgggacaaacaccag
gaaaagctacagcgcaagaaggatcagttccagtatgcccaggagacggtgaaggcggag
gcctggctaaaggccaaggagccgctaatcaactctagctccaactccagtcaggctggg
ggtgctgtaggagaggcccaggctcagactgacgaggtggagcagctcatcctccgccac
gaggccttccgtaaggctgcagctacctggaaggagcgcttcagctcactgagacagctc
tccaatgcagagaagctgagagaagaacagagcagcaagcctgccccaatgccactctcc
agtcggaggatgttcccatcgtcctgcctcactccgacctttccccttgctacctcaact
ctgctgaggcagacggtccagctgcatattgagcccaggcccaagcagactagtctaggg
atggctgcctctgcctccactgcatcccagaggttgggttctaccatggccagctacact
cctgtcatgaatggctccagttaccatggactggaccatcagagcagcagcggggggttg
gagagttctaactaccctgggctaaaccatcaggcctgtggaggtgtggacagcagctcc
agttaccttggagtgaaccatcagactgccctcccgccagtggatagttctggctacctt
ggactgaaccatcaaagcagtgggggtatggttagtccaggctacctacctcaaaatcaa
agtagtggtggtatgggtagtccaggttacctgccgcaaaatcaaagcagtgggggtatg
ggtagtccaggttacctgccgcaaaatcaaagcagtgggagtatgggtagtctaggctac
ctgccgcaaaatcaaagtagtgggggtacgggtagtccaggctacctaacgcaaaatcaa
agtagtgggggtttgggtagttcaggctacctgccgcaaaatcaaagtattgggggtata
gttagtccaggctaccttgcgcaaaatcaacacagtggtggtatgggtagctcaggctac
cttgcacaaaatctaagtagtgggagtatgggtagttcaggctacctggctcaaaaccat
caaagcagtggtggtatgggtagttcaggctacctggctcaaaaccaaggtagtggggtt
atgggtagttcaggcttccttgcgcaaaaccaatgtagtggaattatgggtagttcaggg
taccttgcgcaaaatcaaaatagtggtggtatgggtagctcaggctaccttgcacaaaat
ctaagtagtgggggtatgggtagttcagggtaccttgcgcaaatccaaggtagtggaggt
aagggtagttctagctatctgcctcaaagcggtggggtcatggaccccaaaatggcatat
gcgtggcagcatctgaaagccgactgcatgcagcccaggatcaaccatatccacaaggct
gtcaaccccctcctggaggccagcagggcgcagagggaacagtttggggacatccccatg
gtagacatgatcgggccagagtccggcctggagctcctccatggcaggcttcaaagggac
ccccgcggcagccgctccgacccccagatggaccacctgcggcgggagagggagtacaag
ctgggccgccagacctccagtgaacaggagatccaggcgcggctcaacgagctgccaatg
atcgtgcgtcaggagcgctataggcgacgcctggagaggcagtcgtccagcgagcaggag
ggcagtgggaaggcgaggacaccaaagcaggacgactccagcgacatggagtcagccaag
gaaggctctgacaaacgctcaacagagaagagagccaccacaatggctgagattgtggag
caggcccaggagagagaggcagcacaagccagaggggagacataccgccccaccagcagc
ctctcagcacccgtgacctacgagcgcccgcgcgcccgagaccgccccaaaccccgcagg
agaccccgccccaaagagcctgaggagaagcggcgctctcgctcggctccagcccagagt
ccagcgcaactcttgccgccctcacacactgcccataacgaaggcttcctgtaccgcaaa
cacgactttgatggccagcaaaagagtcccagcagtaagtcctgggtgaacttgtattgc
gtgttgtcaaaaggagagatcattttctacaaggacgccaagagcatcaccacaccttac
aatgaagaaaccccactcgacctgagcgtctgtatatgtgatagcaccatgggatacaag
aagaagaaaaatgtcttcgttatcaagaaaaatgatggcaatgactatattttccatgca
aaggatgaggaggacctgaaggcttgggtaactaacatcaccaccagtataactgaacac
gaggagatcgccaagtgggacaaacccacgacctcgtccacagatcccgaccgctcggag
aggaaagagaagtcagagggtgacgcagatgccaggtcagagagatctgagatgggagga
gaggtggaggaggaagagaggtctgagaagggagaggggtccgagaagacaggcgagggc
tccgagaaggcagacacgtcggagaggggtgagatggcagagggaggggcagggggctcc
agcacgtcagggaagatcaaatga
DBGET
integrated database retrieval system
