Oncorhynchus mykiss (rainbow trout): 110537473
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Entry
110537473 CDS
T07259
Symbol
med13a
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110537473 (med13a)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
110537473 (med13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
110537473
NCBI-ProteinID:
XP_036793312
LinkDB
All DBs
Position
12:complement(33419083..33532690)
Genome browser
AA seq
2174 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILCSFSRC
LKADILSVWRRSQRPGRRELWLFWWGDDPNFAELIHHELTAEEDGVWESGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKSEHLSCSFPFFLHGESNVCTSVEI
NQHQPVYHLSDEHLTLAQQASSPFQVILSPFGLNGTLTGQSFKLSDPPTQKLIEEWNQFY
PISPSSKDKDKQGSPSEDKMEDMDWEDDSLAAVEVLVGGVRMVYPACLVLVPQSDIPAVA
PQGSSHCTTVYTGGLQEPASQRDPAISSVTLTPPTSPEEAQTVDSQSAQKWVKMSSAVDG
FSVDSTSHHEGKIPRRLASQVVERVWQECNINRAQNKRKFSATANGTCEEELMEKVGTWD
FVESAQRSHCNCSRHKSLKQRGGSIPSQPQSSGQPTHTQPPTKHKAGGDKPEKGDKQTKR
PQTPFHHRNTACDDVTKETEVATGQRLAMRSQQAGGGFSGLRPSDSVTKPLQLHGGGVGS
GGSSSEMTGSPQPPPLSPHPCERDRGEETGNGSMKNPSTPHSQHFYQPPPDPCLVGQKGG
EGEPRRLDGLSLHFHHPHTSYPSEPLEPTMYVGSAVNLEEDGSPAPWRFFNLPRRKEAGI
PTPTLPGDKLRDRERDEASGGQEVVSVTELMATSKRPLKVSEERVQMYLQRRNQYLAAAI
TDDDDHEPEVDPYAFEDGDVKFSFSDKKDKMGGERQPGKKHKGEDGAAGLSDDAARAAAH
ARTASTSLIHETDLAVSINDLDNLFNSDEDELTPGSRRAVNGTGDKFGNKEPKPATLDPV
SCISSADLHQMFPTPPSLEQHIMGYSPMNMGSKEYGGLEVGQGMTNLDGASSLGGHFKIE
VEEGYCSPKPQEIKDFSFVYKPELCQAFVGCSMFAPLKTLPSQCLPPIKMPDECIYRPSW
TTVGKQEMLNHPHVPSMAYLNKDSNIPSVGSAMDQDYSQSYTPQTHTPFMSNSGTGILPS
PATPRFSAPTPRTPRTPRTPRGPASVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPS
IPEAHSLYVTLILSESVMNLFKDCNFDSCCICVCNMNIKGADVGVYLSDPTGEAQYPCTC
GFSAVVNRRYGNGSGLFLEDELDIIGRDSDVSREAEKRFEALRQHSLERTGGGGRGERVP
DELILLLQDQCTNPFSPMAGMEPDSLAARGPGGCPVPACVRVEERDFHSDCYMALEHGRQ
FMDNMSGGKVDEALVKSTCLHRWSKQNAVDISALCSQDVLRVLLSLQPVLQDAIQKKRTV
RSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGFEYDFVVLSPFGLPYWEKLL
LDPFGSHRDVGYLVVCPDNEALLQGAKNFFRDLTAVYESCRLGQHRPISKDHPDGIVRVG
GAAAKKLAEQPVSDWFLKAASGNSDAFAKLKLYAQVCRYDLAPYLAAQPLHSSLLAQPTP
PPASSQSSSMQSSGSSTTTSTGPQNSVTPGGPSLPNSSGSVPSNSTGVANSANSAASSGS
LPSSGMQSAKPSSFPPFGTMGLQNQGLDGGTQGGQLGQQNTGLPGGDSASQAPTEPLEST
MEREKVGVPTDGESHAITYPPAIVVYIVDPFTYEEPEAGSSVWTLGLLRCYLEMLQFLPP
HIRNAVSVQIIPCQYLLQPVRSEERHIYAQHLKSLAFSVFSQCRRPLPGSTNVKSLTGFG
PGLAIDTALKSPERPECLRLYTPPFILAPTKDKQTELGETFGEASQKYNVLFVGYCLSHD
QRWLLATCTDLYGELLETCIISIDVPNRARRKKGSARRSGLQKLWDWCLGLVQMTSVPWR
VVIGRLGRMGHGELKDWSILLSRRNLQSLSRRLKEVCRMCGISASDTPSILSACLVAMEP
QGSFVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAFVQVASSNYTTD
TNIDIAFNPIPDGSDAIGIFDLLDQENDLVDPDIINILPASPTTSPVHSPGGHYHQGGDG
SKGQSTDRMESHDEAPNILQQPLALGYLVSTAKAGPLPDWFWSACPQAQNQCPLFLKASL
HLHVSSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHF
VVLNQMYNFIMKML
NT seq
6525 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgttttgtaccaaacggggccagcttggaggattgccactccaatctattc
tgtctggctgatctgactgggatcaaatggaagcggtacgtgtggcagggccccacctct
gcgccgatcctcttccccgtgaccgaggaggaccccatcctgtgcagtttcagccgctgc
ctcaaggcggacatactgagcgtgtggcggcggagccagaggcctggacgtagagagctc
tggctgttctggtggggggacgaccctaacttcgcagagctgatccatcacgaacttaca
gctgaggaggacggtgtgtgggagagcggcctgtcctatgagtgcaggacgctcctgttc
aaagccatccacaacctgctggagcgctgtctcatgaaccgcagcttcgtacgcattggc
aagtggttcgtcaagccctacgagaaggatgagaagcccattaataagagtgaacacctg
tcgtgctcgttccccttcttcctccacggggagagtaacgtgtgcaccagcgtggagatc
aaccagcaccagcctgtctaccacctgagtgacgagcacctcaccctggcccagcaggcc
tccagccccttccaagtcatcctgagtccgtttggtctgaacgggactctgacgggtcag
tcgttcaagttgtcagaccctcccacccagaaactgattgaggagtggaaccagttctat
cccatcagccccagctctaaagacaaggacaagcagggctcgccatcggaggacaagatg
gaggacatggactgggaggacgactccctggccgctgtggaggtccttgtcggtggtgtg
aggatggtgtacccagcctgcctggtgctggtgccccagtctgacatcccggctgtggcc
ccccagggttcctcccactgcaccaccgtctacacgggtggactccaagagcctgcatcc
caacgagaccccgccatctcgtcggtcaccctcacgccccccacatcacccgaggaggcc
cagacagtggactcccagtcggctcagaagtgggtgaagatgtcgtcggctgtggacggc
ttcagtgtggacagcaccagtcatcacgaggggaagatccctcgcaggctagccagccag
gtggtggagagggtctggcaggagtgcaatatcaacagagctcagaacaagcgtaagttc
tcagcgacagctaatgggacctgtgaggaggagttgatggagaaagtaggaacctgggac
tttgtagagtcagcacagaggtcacactgcaactgctccaggcataagtctctgaagcag
cgaggtggcagcatccccagccagccccagtcatcaggccagcccacccacacccagcca
cccacaaagcacaaggctgggggtgacaagcccgagaagggcgacaagcagaccaagagg
ccgcagacgcccttccaccaccgcaacaccgcctgcgacgatgttaccaaggagacggag
gtggcgacgggccagcggctagccatgaggtcccagcaagcggggggtggtttctccggc
ctccgcccctctgacagtgtcaccaagcccctccagctgcatggcggaggggtgggtagc
ggcggctcttcctcagagatgactggttccccccagccccctcccctcagcccccacccc
tgtgagcgcgaccgaggagaggagacaggaaacggctctatgaagaacccctcaacaccc
cacagtcaacacttctaccagccgcccccagatccctgcctggtggggcagaagggtggc
gagggggaaccccggaggctagatggcctgtccctgcacttccaccacccccacacgtcc
tacccctcagagcccctggagcccaccatgtatgtaggctctgctgtaaacctggaggag
gacggctcccctgcgccatggaggttcttcaacctacccaggaggaaagaggccgggata
cccacgccaacgctgcctggggacaagctgagggacagggagagagacgaggcctcggga
ggacaagaggtggtttctgtcacagaactgatggccacttccaagcggcctctgaaggtg
tccgaggagcgcgtgcagatgtacctccagcggaggaaccagtacctggccgccgccatt
accgacgacgacgaccacgagcctgaggtggatccgtacgccttcgaggacggggacgtc
aagttttccttctctgacaagaaggacaagatgggcggcgagcgccagcccgggaagaaa
cacaagggggaggatggagcagcaggtctgtcagatgacgcagcgcgggcagccgcacac
gcacgcactgcctccaccagtctgatccatgagacagatttggctgtgtccatcaacgac
ctggacaacctcttcaactcagacgaggatgaactcacgcctggttccagacgagcagtg
aatggaacaggtgataaatttggcaacaaggaaccaaagccagccactctggacccagtc
tcttgcatcagctcggcagatttgcaccagatgttccccactccccccagcctggagcag
cacatcatgggctactctcccatgaacatgggcagtaaggagtatggtggcctggaggtt
ggacagggcatgaccaacctggacggtgcctcgtcccttgggggacacttcaagatcgag
gtggaggaaggctactgcagccccaagccgcaggaaatcaaggacttctcgtttgtgtac
aagccggagctgtgccaggcatttgtgggctgctccatgtttgcccccctcaagaccctg
cccagccagtgtctgccccctatcaagatgccagacgagtgcatctacaggcccagctgg
accaccgtgggcaaacaagagatgctcaaccacccccatgtgccttccatggcctacctc
aacaaagacagtaacatccccagtgtgggcagtgccatggatcaggactacagccagagt
tacacaccccagacccatactcccttcatgtccaacagtggcacgggcatcctgccctca
ccggccaccccgcgcttctccgcccccaccccacgcactccccgtaccccacgcacccca
agagggcccgccagtgtccagggttcgctcaagtacgagaactcggacctctactcgcct
gcctctaccccctccacctgtcgacccctcaactcagtggaacctgccaccgtgccctcc
atccccgaggcccacagcctctacgtcaccctcatcctctcggagtccgtcatgaacctc
ttcaaggactgcaacttcgacagctgctgcatctgcgtgtgcaacatgaacatcaagggg
gccgatgtgggggtgtacctgagcgaccccacgggagaggcccagtacccttgcacctgc
ggcttcagcgctgtggtcaaccgccgctacggcaacggctcgggcctcttcctggaggac
gagctggacatcatcggacgcgactcggacgtcagccgcgaggcggagaagcgcttcgag
gcgctgcggcaacactcgctggagaggacagggggaggagggaggggggagagggtacca
gacgaactgatcttactgctacaggaccagtgcaccaaccccttctctcccatggctggg
atggagcctgacagcctggcagcgcgggggcccgggggttgtccagtgccagcctgtgtg
agggtggaggagagggacttccacagtgactgctacatggctctggagcacggccgccag
ttcatggacaacatgtcaggaggcaaggtggacgaggccctggtcaagagcacctgtctc
caccgctggtctaaacaaaatgcggtggacatcagtgctctgtgctctcaggacgtgttg
cgggtgctgctctccctccagcctgtactccaggatgccatccagaagaagaggacggtg
cgctcctggggcgttcagggacccctcacctggcagcagttccacaagatggctggacgg
ggctcctacggcacagatgagtctcctgagcccctgcccatccctaccttcctggtgggt
tttgagtatgactttgtggtgctgtcgcccttcggcctgccctactgggagaagctgctg
ctggaccccttcggctcccacagggacgtgggctatctggtggtctgtcccgacaacgag
gccctgctccagggggccaagaacttcttcagggacctcaccgccgtctacgaatcatgt
cgtctgggccaacaccgccccatctcaaaagaccacccggacggcatagtgagagtgggt
ggagcggccgccaagaagctggcagagcagcctgtcagcgattggttccttaaggctgcc
agcggtaacagcgacgccttcgccaagctcaagctttacgctcaagtctgccgctacgac
cttgctccatacctcgctgcgcagcctttacacagctccctcctcgcacagcccacaccc
cctcctgcctccagccaatcctcatccatgcaatcctccggctcctccaccaccacctcg
actggcccccaaaactcagtgacccccggaggcccctccctccccaacagcagcggcagc
gtgcctagcaacagcacgggtgtagccaacagtgccaacagcgcggcatcatcagggagc
ctgcccagcagcgggatgcagtctgccaagcccagctctttccctccctttgggaccatg
ggcttgcagaaccagggcctggatggtggcacccagggagggcagctgggccagcagaac
acaggactccccgggggggactcagccagccaggcacccactgaacccctagagagcacc
atggagcgagagaaggtgggtgtgccgacggacggagagtctcacgccatcacatacccc
ccggccatcgtggtgtacattgtggaccccttcacctatgaggagcctgaggcggggtcc
agtgtgtggaccctgggactgctgcgctgctacctggagatgctccagttcctcccacca
cacatccgcaacgctgtctctgtacagatcatcccgtgccagtacctgctccagccggtg
aggagcgaggagcgtcatatctacgctcaacacctcaagtccctggccttctcagtgttc
tcccagtgcaggcggcccctccccggatccaccaacgtcaagtcactaaccggcttcggc
cctggcctggccatcgacactgcactgaagagcccagagagaccagagtgtttgcggcta
tacacgcctccgttcatcctggcgccgaccaaggacaagcagacagagctgggggagacg
tttggggaggcctctcaaaagtacaacgtgctgtttgtgggctactgcctgtcccacgac
cagcgctggctcctggccacctgcaccgacctgtacggagagctgctggagacctgcatc
atcagcatcgatgtgcccaacagagcgcggaggaaaaaaggctctgcccggaggtcgggc
ctgcagaagctgtgggattggtgcttggggctggtgcagatgacatcagtgccatggagg
gtggtgattggtcgactgggcagaatgggacatggcgagttgaaagactggagtattctg
ttgagcaggaggaacctgcagtctctgagtcgccgtctcaaggaggtgtgtcgtatgtgt
ggcatctctgcctccgacactcccagcatccttagcgcttgcctagtcgccatggagcct
cagggctcctttgtcatcatgccagactctgtgtctacaggctcagtgtttggccgcagc
accactctgaacatgcagacgtcccagctgagcactcctcaggacacatcctgtacccac
atcctggtgttccccacctcagcctttgtccaggtggctagctccaactacactactgac
accaacatagatatcgccttcaaccccatccccgatgggtcggacgccattgggatcttt
gacctgctggaccaggagaacgacctggtggaccccgacatcatcaatatcctgcccgcc
tcgcccaccacctcgcccgtacactcccccggcggccactaccaccaggggggagacggc
agcaagggccagagtacagaccggatggagtcccacgatgaagctcctaacatcctgcag
cagcccctggccctgggctacttggtgtccacagccaaagccggcccactgcctgactgg
ttctggtcagcctgccctcaagctcagaaccagtgtccccttttcctcaaggcctctctg
catctccacgtgtcttcagtgcaatcagatgaactgctgcacagcaaacactcccaccca
ctcgactccaatcagacctcagacgtactcagatttgtgctggagcagtacaatgccctt
tcctggttgacgtgtgaccccgcgacgcaggatcggcgctcctgtctgcccatccacttt
gtggtgctcaaccagatgtacaacttcatcatgaagatgttgtaa
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integrated database retrieval system
