Oncorhynchus mykiss (rainbow trout): 110537494
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Entry
110537494 CDS
T07259
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
110537494 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110537494 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110537494 (ncor1)
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110537494 (ncor1)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
110537494 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
110537494
NCBI-ProteinID:
XP_036793339
Ensembl:
ENSOMYG00000024730
LinkDB
All DBs
Position
12:complement(34602278..34725530)
Genome browser
AA seq
2543 aa
AA seq
DB search
MSSSSGYPPTQGSFSSEQSRYPPHSVQYTFSTTRHQQEFTVPDYRGHLQDQQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSVTSQQQTDGHEALEAKRPRMETVSEAHFSHNALSGSI
ILPLQSHQVQDSLRASGGEVKKETQFSGMKAESQSPGGLHRVVEEQDGSPSKLSKEELIQ
SMDRVDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPATPPPIPQEHNKHRSIVQIIY
DENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHAR
KQREQNICQRYDQLMEAWEKKVERMENNPRRKAKDSRTREYYERQFPEIRKQREQQERFQ
RVGQRGTGMSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDTEQRRVRFINM
NGLMDDPMKMYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVSDCVLYYYL
TKKNQNYKTLVRRNYGRRRGRNQQITRPSQEDKSDDKIEEEKSEKLEKKEDEQNKEEEEK
DEKEDSRDIGKDKDKCDGGEDEDGKEQSTPRGRKTANSQGRRKGRITTRSMANEAASVAT
EEPLPPASAPEPVLPAESPQPLKAEPTTQKAVREPTKTAPGGAPMDPNRGALGTAAAANI
ETGETSRWTEEEMEVAKKGLVEHGRNWPAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQ
QHKQDIRRARGDRDPSQSESMASADDDENPEDSDGGENSSDTESAPSPSQADPSKVGGES
QRGDIAGGSESQRSNQDQASDRKGQDLSYGELRVKLEKSPEGEARDPDSQEDQDRERSRA
AYEGQVHPKCEPQEVDMKPGGTEVQVKVEPDSAKEKGDNGEREEQREGHHSDNDSSATCS
ADEDVDAEPERQRIFSSVDKPSLLSPPGSVLMSTAKQAHLNMQQFQQGAAAIPPMVSHYS
NPHFSMIRYAHSERQAYGGRQQGESMSCLDQPTRQVSPFSTGGMPMGAPLSGFAMFQHQI
KAVHESAHAEDKQRQDQADPEHSRQPPNCPRFTTHSPTVLDREGKPFPYMPYDMKMALEQ
EAQSGRPGSPYRLSPRDMSKASPQPNDPNASRYSVPPVLQPAPNQVVQSLPDGVRVTFSR
HSRPANIPSPPPLIPTSKPTDKPSFIQGGSISQGTPGTYLPSHAVYGGPEVAKSSVGSIS
LGLPRQQDPTKPVSYIKQEECSPRGQSEGLLSQMQYEGVVRGGPMDGGISRGNPSRGSIT
QGTPALSGSSIAADLLKGTNTKLATEELSNPEKAREHLAKGHVIYEGKSGHILSYDAIKN
PREATCSPRSGHELKRSHDMMEAARGHPGREGAPFEGLIIRALPRESPHGESKERPMMTG
SIMQGTPRTSAEAYEETMKYGKQIKRESPPIRSFEGGIGKGKPYEGVNTIKEMGRSIHEI
PRQEQPGQDPRKTPDMAANSRAAMEGSISQGHPLSQSAIKHNVKSLITSPSRLPHGPTMP
QLEAMERAKYEESKATAEQQQRARHTSVVNSTTSVLRSTHQEQGKSQLSPGMYQDADARR
TPVNYCTSSMSRGSPMLGRGQEGTGKPTSHDRKSTMTPNQRDSVPAKSPVSGGDPNHPMA
SHSPFDPHHRPMAPGEPRFHLPPHLDPTLFHRAVLDPAAYMFPRQPSPTGYHNTYQLYTM
ENTRQTILNDYITSQQMQVIPRPDVARGLSPREQQQIAISYPPGARGIIDLAQMPPTILL
PHPGGTGTPTMDRITYIPGAQPPFPPRPFNPASISPVCFFVSTGHQAHLAATAAACQERE
REREREREREHREKEREKERERENREREREEYRQRERERVVAAAVANDYMRGGPGQPDRP
GSRGYLRSPSPSMRSQEAQQQRPSIFQGTNSKGVITPLMPSAAAQAGARYSTAADALAAL
VDAAASAPQMDVNKGKDSSKHDRDDDMSSSSSSSSAARRQHEQQQQEADRRSMQSPYMSL
PGGKPHPGYAEGSGGPQGGKDKGPPTKSRIEEELRTRGKTTITAANFIDVIIKRQIASDK
DSRERGSQSSDSSSSLSSSRYEVPSGGAIEVISPANSPAQAQQEKQQQDDRERADRDRAA
QAATQAAGMRSFDMIRYRQSAESQQPPSSQADGGYSQSQQVPKTHRVMTLADHISHIITQ
DFARNQDPPQSSTTISSSATTTFQSAQLPVSSSGPGGRAKGPSRYSPENQTQAPSHHQRP
TPSRVSPENAPDKPRARPGKSPDRGGRGAVESYEPISPPQSYQDKQQEAREQQQQPQRRE
ADQPEMRGDSRSPGSVSYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGVGDSDVGNAQPG
TEIFNLPAVTSSSSVNPRNHSFSDPASNLGLEDIIRKALMGNLEERPEEHQGGPQPSCNT
PSNEARQEANPSPSMGKQKLQSKANSRKSKSPNPGQAYAAAAQAAGGERPSSVSSVHSEG
DYHQQATGWAWEDRPSSTGSMQFPYNPLTMRMLSSTPPTSMASPSMQAQQPPPGGLLGSQ
QQRVWEREPLLSEQYETLSDSDD
NT seq
7632 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccccctacccaggggagcttcagcagcgagcagagccgc
tacccaccacactctgtccagtacaccttcagcaccacacgtcaccaacaggagttcacc
gtcccggactaccgaggtcacctgcaggaccagcagggtcggcgaaggccttccttgctt
tctgaattccaccccggaactgagaggcctccagagagacgtcatggctatgagcaacag
ttccacagtgtcacctcccagcagcagaccgacggacatgaggccctggaagccaagcgg
cctcgcatggagaccgtctctgaggcccacttttcccacaatgccctgtccggaagcatc
attctgcccctgcagtcccaccaggtccaggacagcctcagagcctccggaggggaggtc
aagaaggagacccagttcagtggcatgaaagccgagtcgcagtccccaggagggctgcac
cgtgtggtggaggagcaggacggctcgccctccaaactgtccaaggaggaactgatccag
agcatggaccgtgtggacagagaaatcgctaaagtggagcagcagatcttcaaactgaag
aagaagcagcaacaactggaggaggaagcggcgaagccagtggagccagaaaagccggcg
acccctccccccataccacaggaacacaacaaacaccgcagcatcgtccagatcatctat
gacgagaacaggaaaaaagctgaagaggcccataagatatttgaaggtcttggtcccaag
gttgaactgcccctttataaccagccgtcggatactaaagtataccatgacaacataaag
actaatcaagtgatgaggaagaagctgattctgtttttcaagagaaggaaccatgctcgt
aaacaaagggaacagaacatctgccagcgctacgaccagctgatggaggcgtgggagaag
aaggtggagcggatggagaacaacccgcgtcgcaaggccaaggatagccgcaccagggag
tactacgagagacagttccccgaaatacgcaagcagagagagcagcaggagcgcttccag
agggttggtcagagaggaactggaatgtctgcgaccatcgccagaagcgagcatgagatt
tctgaaatcatcgacggcctttctgaacaggagaacaacgagaagcagatgagacagctg
tccgtcatcccgcccatgatgtacgacacagagcagaggcgagtcaggttcatcaacatg
aacggcctgatggacgacccaatgaagatgtacaaggctcggcagttcatgaatgtgtgg
accgaacacgagaaggagattttcaaggaaaagtttgttcagcacccaaagaattttggc
cttattgcttcctatctagagagaaagtgtgtctccgattgtgtcctgtactactacttg
accaagaagaaccagaactacaagacgctggtgagacgcaactacggaagacggcgaggg
agaaaccagcaaataacacgaccctcgcaagaagacaagtcagacgacaaaatcgaagag
gagaaatcggagaagttggagaaaaaagaggacgagcagaataaggaagaggaagagaaa
gatgaaaaggaggactccagggacatcggcaaagacaaagacaagtgtgacggtggggaa
gacgaggacggaaaggagcagagcacgccacgcggcagaaagaccgccaacagccagggc
cggcgcaagggaaggatcaccacgcgctccatggccaacgaggctgcctctgtggcgact
gaggagccactaccgccggcctccgcccctgagcctgtcctgcctgcagagtctcctcag
cccctcaaagctgagcctactacacagaaggctgttagagagcccaccaaaactgcacca
ggtggtgctcccatggaccctaacagaggagcactaggaactgctgccgccgcgaacatt
gaaaccggtgagacttctcgctggaccgaggaggagatggaggttgccaaaaaaggcctt
gtggagcatgggcgtaactggccagccattgccaagatggtgggcaccaagagcgaggct
cagtgcaagaacttctacttcaactacaagagacggcacaacctggacaacctgctccag
caacacaagcaggacatccggcgggcgcggggtgatcgggacccgtctcagagcgagagc
atggcctcagctgacgacgatgaaaacccagaggatagtgatggtggagagaacagctca
gacacagagagtgccccttccccgtcccaggcagacccctccaaggtcggaggagagtcc
cagaggggagacattgctggagggtcagagagccagcggtctaatcaggaccaggccagc
gatagaaagggccaggatctgtcctacggggagctgagggtcaagctggagaagagcccg
gagggagaggccagagaccctgactctcaggaggatcaggacagggagaggtcccgggca
gcctatgagggccaggtgcacccgaagtgtgagccccaggaggtggacatgaagccaggg
ggtactgaggtacaggtgaaggtggagcctgactcggctaaggagaagggggacaatggg
gagagagaggagcagagagaggggcaccactcagacaatgactccagcgccacctgcagt
gcagatgaggatgtggacgctgagcccgagagacagaggattttttctagtgtggacaag
ccttcgctgctcagccctcccggctcagtgctgatgtccacggccaagcaggcccacctc
aacatgcagcagttccagcagggcgccgctgccatcccgcccatggtcagtcactatagc
aacccacacttttctatgatcagatatgcccattcggagaggcaggcatacggaggcagg
caacagggtgaaagcatgtcttgtttagaccaacctacccgtcaagtgagtcctttcagc
actggcgggatgcccatgggagcccccctcagtggctttgccatgttccagcaccagatc
aaggcggtgcacgagtcggcccacgcggaggataaacagagacaggaccaggccgacccc
gagcacagcagacaacctcccaactgcccgcgcttcactacccacagccccactgtactg
gacagggagggtaagcccttcccctacatgccttatgatatgaagatggctctggagcag
gaggcccagtctggtcggcctggatctccctacaggctctctcccagggacatgagcaag
gcctctcctcagcccaacgaccccaacgcctcccgctacagcgtgcctccagtgctccag
ccagctcccaaccaggtggtccagagtctgcctgatggagtccgtgtgactttctccaga
cacagccgacccgccaacattccatctcctcctccactcattccaacctccaaacccaca
gacaagccttcctttatccagggcggctccatctcccagggaactcctggtacgtacctg
ccatcccatgctgtctacggtggcccagaggttgcaaagagctcagtgggctccatatcc
ctgggcttgcccaggcagcaggaccccaccaaacctgtgtcctacattaagcaggaggag
tgttctccgcgtggccagtcggagggcctcctttcccagatgcagtatgagggggtagtc
agaggaggcccaatggatgggggtatcagcagaggcaacccatccagaggatcaatcaca
cagggcacgccagccctgtctgggtccagcattgcggctgacctgctgaagggcaccaac
accaagctggccacggaggaactgagcaacccagagaaggcccgggaacatctggccaag
ggacacgtcatctacgagggcaagagtggacacatcctatcctacgatgccattaagaac
ccaagagaggccacgtgtagccccaggtcaggccatgagctcaaacgttcccacgatatg
atggaggccgccagaggccaccccgggagagaaggagcccccttcgaggggttgataatc
cgagccctgcccagagaaagtccccatggggagtctaaggagaggcccatgatgactgga
tccatcatgcaaggtacacccagaacctctgcagaggcctatgaggagaccatgaagtac
ggcaagcagataaagagggagagcccacccatccgctcatttgagggggggataggtaag
ggtaagccctatgagggggtgaacaccattaaggagatgggtcgctccatccatgagatc
ccccgccaggagcagcctggacaggacccccgcaagacccccgacatggctgccaacagc
cgagccgccatggagggctccatatcccagggccatcctctgagccagtcggccatcaag
cacaacgtcaagtccctgatcaccagtcccagtaggctgccccatggccccaccatgccc
cagctggaggccatggagcgggccaagtacgaggagagcaaggccacggcggagcagcag
cagcgagcgcgccacacctctgtggtcaactcgaccacctccgtgctgcgctccacccac
caggagcaaggcaagtcccagctcagccctggcatgtaccaagacgcagatgcccgcagg
accccggtcaactactgcaccagctccatgtccagaggctcgcccatgctgggccgagga
caggagggcactgggaagcctacgtcccacgataggaagagtaccatgacccccaatcag
agggacagtgttccagccaagtcccctgtgtcagggggtgatcccaaccaccctatggcc
tcccacagcccctttgacccccaccaccgccccatggcccccggagagcctcgcttccac
ctgcctccacacctagaccctaccctcttccaccgtgccgtcctggaccctgctgcatac
atgttcccgaggcagccgtccccgacgggctaccacaacacctaccagctgtacaccatg
gagaacacaaggcagaccatcctcaacgattatatcacttcacagcagatgcaggttata
ccacggcccgatgttgccaggggcctgtcgccacgggaacagcaacagattgccatctct
tatcctcccggagcgcgagggattattgatctagcccagatgcctccaactatcctgttg
cctcaccctgggggaacaggtactcccactatggaccgcatcacctacatccccggagct
caaccccctttccctcctaggcctttcaacccagcctccatatctccagtctgtttcttt
gtgtccacaggccaccaagcccacctcgcagctacagcagctgcctgtcaggagcgagaa
cgagagagggagcgcgaaagagaaagggagcatcgagagaaagagagggaaaaggagcga
gaaagggagaacagggagagggaaagggaggagtacagacaacgagagcgtgagcgagtg
gtggctgcagcggttgccaatgactacatgcgtggaggtccagggcagccagatagacca
ggaagccgtggttacctgcgtagcccctccccatctatgaggtcacaggaagcccagcag
cagcgacccagcatcttccaaggaaccaacagcaagggcgtcatcacccctctcatgcca
tcagcagcagcccaggcaggagcccgttacagcactgcagccgatgccctggctgccctg
gtggacgctgccgcatccgcccctcagatggacgtcaacaagggcaaggactcctccaag
cacgatcgagacgacgacatgtcttcatcatcatcatcatcctctgcggccaggcggcag
cacgagcagcagcagcaggaggcagacaggcgctccatgcagtctccctacatgtctctg
ccaggggggaaaccccacccaggatacgctgaggggtctggtggtccccaggggggcaag
gacaagggtccccccaccaagtcacgcattgaggaggagttgaggaccagaggaaagacc
accatcacggccgccaacttcatcgacgtcatcatcaagcgtcagatcgcctcggacaag
gactcacgggagagaggctcccagagctccgattcctccagcagcttgtcatccagtcgg
tatgaggtccccagtggaggagccatcgaggtgatcagcccagccaactctccagcccag
gcccagcaggagaagcagcagcaggatgacagggagagggctgacagggacagggctgca
caggcagcaacacaagcagctggcatgcgttcctttgacatgatccgctaccgccagtca
gcggagtcccagcagcccccatcttcccaggctgacggagggtactcccagtcccagcag
gtccccaagacccatcgggtcatgaccctggctgaccacatctcgcatattatcacccag
gactttgccaggaaccaggatcctcctcagtcctccaccaccatctcctcctctgccacc
accacattccagagcgcccagctgccagtatctagctcgggccccgggggccgtgccaag
ggccccagccgctacagcccagagaaccagacccaggccccatcacaccatcagagaccc
acgcccagcagagtgtctcctgagaacgcccctgacaagcccagagccagacctggtaaa
tcccctgatcggggtggcaggggggcggtggagagttatgagcccatctcccctccccag
agctaccaggataaacaacaggaggccagagagcagcagcaacaaccccagagacgagag
gctgaccagcctgagatgaggggcgactctcgctcccctggcagtgtcagctacctgccc
tcctttttcaccaagctggagaacacctcccctatggtgaaatccaagaagcaggagata
tttcgtaagttaaactcctctggtgtcggggattctgatgtaggaaatgcacaaccaggc
acagagatcttcaacttgcccgctgtgaccagctcaagcagcgtgaaccccaggaaccac
tccttcagcgacccggccagtaacctgggcctggaggacatcatccggaaggccctgatg
ggcaacctggaagaaaggccagaggagcaccagggagggcctcagcccagctgtaacacc
cccagcaacgaggcccgccaggaggccaacccctcacctagcatgggcaagcagaaactg
cagagcaaagccaacagccggaagtccaagtcgcccaacccaggtcaggcatacgcagca
gcagcccaggcagcaggaggggagcggccctcatcagtctcctccgtccactcagaggga
gactaccaccagcaggccacgggctgggcctgggaggaccggccctcgtccacaggctct
atgcagttcccctataaccccctgaccatgcgcatgctgagcagcacgccccccacctca
atggcctccccctccatgcaggcccagcagcccccaccaggaggccttctgggttcccag
cagcagcgggtgtgggagcgggagcccctactgtcggagcagtatgagactttgtcagac
agcgatgactga
DBGET
integrated database retrieval system
