Oncorhynchus mykiss (rainbow trout): 110537505
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Entry
110537505 CDS
T07259
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110537505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110537505
03021 Transcription machinery [BR:
omy03021
]
110537505
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
110537505
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
110537505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
POU2F1_C
HTH_31
Motif
Other DBs
NCBI-GeneID:
110537505
NCBI-ProteinID:
XP_036825110
LinkDB
All DBs
Position
3:12154214..12241744
Genome browser
AA seq
764 aa
AA seq
DB search
MFVPLPVPFMFQRTAPDLNAWRLKSPLALRSDSEIRMSKPVEVENTVADSPMESTDSERN
GPDSNHQLQQMKISPFHLSPTLSSNKNKMEEGGEMSPGPPPHHSHAPSQTPLPHTQLMLT
GSQLAGLTALLPAQQQLLLQQAQAQLLAAAVQQSVQQSNAAHAAHAAHAAHAAHAAHAAA
QANQQAQAAAAANQHAQQQAGQTGQQGQSQPQGQSTHEQTGQPVPVPPTHPQLTLSQPIQ
LTAQDIQQLLQLQQLVLVPGHHLQSPQFLLQQHQGQQGLLSTPNLIQLPQQNQGSLLSAP
RLGLQAQRDKAMEGSGVMTSVSSVTSHPEEPSDLEELEVFARTFKQRRIKLGFTQGDVGM
AMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSTDSTMPSPSSLSSS
SMGFEGLPGRRRKKRTSIETNVRVALERAFITQNQKPTSEEILCIADQLSMEKEVIRVWF
CNRRQKEKRINPNSATPPLPSQPPQAPPTHKPPCYSPHMMSSQLSSQLSSQMSSQLSSQM
SSQLSQAVTSLSTTLTTMSSFSPLIPSGPTHSSLSSASSPVTPPPPRSTASPATPSHSTL
SLNTGLWRLGKKNGDVSNYITDFAANLRNTVMGVNTGNQALNQALLSNNPLATIQALAAS
GGQLPLSSLEGGSKVLLGGAGGQGGGLQSSFFLNHPAFLHMGQNPGAGLVSAAVAKASQP
SPFPSTSSISPTPCSPSPCSSPASSCDFDELAHSPSSLGGAKIE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttcatgtttcagagaactgcccctgacctcaacgcc
tggcgtctgaagtccccgttggctctacgttccgactccgaaatcaggatgtcaaagcca
gttgaggttgagaacacagtggctgactctccaatggagagcacagattcagagcggaat
ggtcctgactcaaatcatcagcttcagcagatgaaaatcagtccctttcacctttctcca
accctcagcagcaacaagaataagatggaagagggtggtgagatgtccccgggccctcct
ccccaccacagccacgccccctcacagacgcccctcccacacacacagctcatgctgacc
ggttcccaactggcagggttgacagctctcttgccagctcagcagcagttgttactgcag
caggctcaggctcagcttctagctgcagctgtgcagcagtctgttcagcagtccaacgca
gctcacgcagctcacgcagctcacgcagctcacgcagctcatgcagcccacgcagccgcc
caagccaatcagcaagctcaggcagccgcagcagccaatcaacatgcccagcagcaggcg
ggacagacagggcagcagggccaatcacagccccagggacagagcacacatgaacagaca
ggtcaacctgtccctgtcccgcccactcatcctcagctcaccctctctcagccaattcag
ctcaccgcccaggacatccagcagttgttgcagctgcagcagttggttctggtgccagga
caccacctgcagtctcctcaattcctcctccaacagcaccaagggcagcaaggactgcta
tcaacaccaaatctgattcagctacctcagcaaaaccaagggagcctcctgtccgctccc
aggctgggactccaagcacagagagataaggctatggagggcagtggggtcatgacctct
gtgtcctctgtgacctctcaccccgaggagcccagtgaccttgaggaactggaggtgttc
gcccgcaccttcaaacagagacgcatcaaactgggctttacacagggtgacgtgggaatg
gccatggggaagctatatggtaatgatttcagccagaccaccatctctcgcttcgaggcc
ctcaacctgagctttaagaacatgtgcaaactcaaaccactactggagaagtggctcaat
gatgcagagaccatgtccacagacagtactatgcccagccccagctctctgtcctcttcc
tcaatgggcttcgagggcctgccgggccgacgcaggaagaaaagaaccagcatcgagact
aacgtccgcgtggccctggagagagccttcatcacgcagaaccagaagcctacctcagag
gagatcctgtgtatcgcggaccagctcagcatggagaaggaggtgatccgcgtgtggttc
tgcaaccgccgacagaaagagaagcgtatcaaccccaacagtgccacccctcccttgccc
agccagcccccccaagccccaccgacgcacaaacccccctgctacagcccacacatgatg
tccagtcagctgtccagtcagctgtccagtcagatgtccagtcagctgtccagtcagatg
tccagtcagctgtcccaggcagtgaccagcctcagtaccacattgaccaccatgtcatcg
ttctcccctctgatccccagtggtcccacccactcatctctcagctccgcctcctctcca
gtgactcctcctcctcctcgcagcacagccagcccagccactcccagccacagcacactg
agtctcaacacaggcttatggcgtttgggtaaaaagaatggtgatgtgtctaactacatc
accgattttgctgcaaacttgaggaacactgtgatgggagtaaacacagggaaccaggct
ctgaaccaagctctcctcagcaacaaccctttggctactatacaagctctagcagccagt
ggtggccagctgcccctttccagtcttgaggggggcagtaaggtgttgctgggtggtgca
ggggggcagggagggggtctccagtcctcctttttcctcaaccaccccgctttcctccac
atgggccagaatcctggtgctggattggtcagcgctgccgtagccaaagcatcccagccc
tcccctttcccctccaccagtagcataagccccaccccctgctccccctccccttgctcc
agccccgcctcttcctgcgacttcgatgaattggcgcacagcccatcctcattgggaggg
gctaagattgagtga
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