Oncorhynchus mykiss (rainbow trout): 110537577
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Entry
110537577 CDS
T07259
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110537577
Enzymes [BR:
omy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
110537577
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
Other ribosome biogenesis factors
110537577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
FtsJ
RsmF-B_ferredox
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
110537577
NCBI-ProteinID:
XP_021479401
Ensembl:
ENSOMYG00000032158
LinkDB
All DBs
Position
12:39006150..39014747
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AA seq
519 aa
AA seq
DB search
MALYAKAAEILEKVERKQATVKTLVYDSKFQNIKQLFALVCETQKFSSILQEIIESTKLL
KQTKIKMNLAKVLVYDLVIGKGLKCGGAWKALMMKHRSRLQAALARMKIKQKVSRNQDLL
SSSLQQPEGDQLPRYVRVNTLKTTVKDAIDYFKREGFSYLGQAYRLDDLNLKGKSFVGDL
HLSDLLVFSPKTDFHDHNLYKAGHIILQDKASCLPAYLLNPPTGSHVLDACAAPGNKTSH
LAAIMKNKGRLFAFDLDAKRLSTMSTLLLRAGVTCQQLANQDFLKVDPDGPQYKDVEYIL
LDPSCSGSGMVCLRDEASPSQKEQDKRRLQALAAFQLHCLNHALRFPRLQRVVYSTCSIH
TEENEQVVAACLLQNTGFRLVPLLLQWPERGLAPLTKCLRASTTKTLTHGFFVALLERHT
AQSLEEQASETLNPVAEMSPSSPSASKDIHEVQEPISTTKDIDMAEEAKPTEENTETSGG
VKKKRKKKKDGDKEALEPKATEEQTNTSGRANRKKAKVE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtacgcgaaagctgccgagattctcgagaaagtggagaggaagcaggctact
gtaaagactttggtttacgatagtaaatttcagaatatcaagcagctttttgccctggtg
tgtgagacacagaagttttcatccatccttcaagagatcattgagtccaccaagctcctc
aaacagaccaagataaaaatgaatctggccaaggttctggtgtatgacctggtcattggt
aaggggctgaagtgtggcggggcctggaaggcgctgatgatgaaacaccgctctagactg
caggctgccctagcccgcatgaagatcaagcagaaggtcagccgcaaccaggacctgctc
tcttccagtctccagcagcctgaaggcgatcagctcccaaggtatgtgcgtgtgaacacg
ttaaagaccacagtgaaggacgccatcgattacttcaagagagagggcttctcctacttg
ggacaagcctacaggctcgatgacctgaatctgaaggggaaatcctttgtgggtgacctg
cacctttcagacctgctggttttctctccaaagacagacttccatgaccacaatctgtac
aaggctggccacatcattctacaagacaaggccagctgtctccctgcatacctcctgaac
cctcctacaggcagccacgtcctggacgcttgtgcagcaccggggaacaaaaccagccac
ctcgctgccatcatgaaaaacaaagggaggctgtttgccttcgacctggatgccaagcgt
ctctccaccatgtccactctcctgctccgcgccggagttacatgtcagcagctggccaat
caggacttcctaaaggtggacccggacgggccgcagtataaagatgtggagtacatcctg
ctggacccgtcgtgcagcggatcagggatggtgtgtctgcgggacgaggcctcaccctcc
caaaaggagcaggacaagcgtcgtctgcaggccctggcagcgttccagctgcactgtctc
aaccatgccttgcgcttcccccgtctgcaacgtgtggtgtactccacctgctcaatccat
accgaggagaacgagcaagtggtggccgcctgcctgctgcagaacacaggtttcaggctg
gttccactgctcctgcagtggcccgagcgtggcctggctcccctcacaaagtgtctcaga
gccagcaccaccaaaaccctcacccatggcttctttgtggccctgctggagcgacacaca
gcacagagtctagaagagcaagcctccgaaacactcaatccggtcgctgagatgagtcca
agtagtccttctgccagtaaggacatacatgaggttcaggagccgattagcaccaccaag
gatatagacatggctgaggaagccaaacccacagaggaaaatacagaaacttcaggagga
gtgaagaagaagaggaagaaaaagaaagatggggataaggaggctctggagcccaaagcc
actgaggaacagacaaatacctcaggaagagcaaatagaaaaaaggctaaagtggaatga
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integrated database retrieval system
