Oncorhynchus mykiss (rainbow trout): 110537604
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Entry
110537604 CDS
T07259
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110537604 (ddx10)
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110537604 (ddx10)
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
90S particles
Helicases
110537604 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
110537604
NCBI-ProteinID:
XP_036793451
Ensembl:
ENSOMYG00000035475
UniProt:
A0A8C7TCZ0
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All DBs
Position
12:complement(39425122..39494021)
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AA seq
866 aa
AA seq
DB search
MEKGKRPNVSLNKKTRKKNPTDTIDPVKNFERWKKKYNKTKTRVKQEKRQKRRPEWQVEK
EAIQRLVNKYNEINAKDAERFSDFPISKNTLRGLMEAQYRQPTEIQRQTIGFALQGKDVL
GAAKTGSGKTLAFLIPVLECLYRQQWTAMDGLGALIISPTRELAYQTFEVLRKVGKNHEF
SAGLIIGGKDLKNESEKIHRTNIIICTPGRLLQHMDETAAFHASDLHMLVLDEADRILDM
GFADTINAIVENLPKTRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLEQ
NYVVCELHQKVNMLFSFIRSHLQKKVIVFFACCKEVQYLFRVFCRLRPGMPILALHGKQQ
QMKRVEVYNDFIKKKNAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRVGRTARYK
EGGEALLVLLPSEEKDMVSQLQEKKVPINRIQVNPEKLTSVQQKLEAFLAQEKEQKERAQ
RCFVSYLRSVYLMKNKDVFDVFQLKLQEYAASLGLAVAPRVRFLNKVQKQRADPGQSGGL
GDVAPHEEEKELKSFKAQLRGDGLKSEAQESQSSDEEDDEEEDEEKVQPGPKGLIFGEDE
TEEDEDMRDLDLLTVKRKDVFSLEEVDQDDEETDSNTIKKTEKETKFKEAKKVLKRNFQV
NTKLVFTEEGQMVQQWPPLQRTAVPATEGEEDDCTSGINVEEARERLRREDQEFDKLEYR
RKVKEKHREKRLKENAARREASKQYAEEQKSGEEDEEEVVAYLGGSDGEEFDPSTLPDPD
KLHYDSEEEDDQISPAAGTRKRIHSDHIDDSGEEEEEEEEEEEEEEEAAAGSRKRPRQQA
TAKPLDTGLSLAEDEALVLHLLGNRS
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggcaaacgaccaaacgtgtccctcaataaaaaaacaagaaagaaaaaccca
accgacactattgatccggtgaagaacttcgagcgatggaagaagaaatacaacaagacg
aaaacacgagttaaacaagagaaaagacagaaaaggagacctgaatggcaggtggagaaa
gaagctattcaaaggcttgtcaacaaatataacgagataaatgccaaggatgctgagagg
ttttcagatttccccatctcaaagaataccctgcgaggtctgatggaagcacagtatcgt
cagcccacagaaatacagagacagaccattggctttgcgttgcaaggtaaagatgttctg
ggtgctgcaaagacgggctctggaaaaacactggcctttctcattcctgttttggagtgt
ttgtatcgtcagcagtggacagccatggatggcctgggggccctcatcatctccccgaca
cgagagctggcctatcagaccttcgaagtactccgtaaagtgggcaagaaccacgagttc
tctgccggcctcatcattggcggaaaggacctgaaaaatgagtctgagaagatccaccgc
accaacatcatcatctgcacgccaggacgcctgctccagcacatggacgagactgctgcg
ttccatgcctccgatctgcacatgctagttttggatgaggcggatcgtatcctggacatg
ggttttgccgacactatcaacgccatagtggagaacctccccaagacccgtcagacactg
ctgttctcagccacacagaccaagtcagtgaaagacctggcccgcctcagcctcaaagac
ccagagtacgtctgggtgcacgagaaggccaagttcagcacgccggccacgctggagcag
aactacgtggtgtgtgagctgcaccagaaagtcaacatgctcttctccttcatcaggagc
cacctgcagaagaaagtcattgtcttctttgcctgttgcaaagaggtgcaatacctgttc
cgggtgttctgtcggctgcgtccgggcatgcccatcctggccctgcatgggaagcaacag
cagatgaagagggtggaggtctacaatgacttcatcaagaagaagaatgctgtgctcttc
gccacagacattgcagccagaggcctagacttccctgccgtgaactgggtgttgcagttt
gactgtccagaggatgccaacacatacatccacagagtgggacgaaccgccaggtataag
gagggaggagaggctctgcttgtcctgctgccctcagaagagaaggacatggtatctcag
ctccaggagaagaaagtccccatcaacagaattcaggtgaacccagagaagctgacgagc
gtgcagcagaagctggaggctttcctggcccaggagaaggaacagaaggagcgagctcag
aggtgtttcgtctcctacctgcgctccgtctacctcatgaaaaacaaagacgtctttgat
gtgttccagctcaagctccaggagtatgcagcttctctgggcctcgctgttgctccaagg
gtgcgttttctcaacaaagtccagaagcagagagcagaccctggacagagtggcgggctg
ggagatgtggccccgcatgaggaggagaaggaactaaagagcttcaaggctcagctcaga
ggagacgggctcaagtccgaagctcaagaatcccaaagctcagatgaggaagatgatgag
gaggaggatgaggaaaaggtacagcccggtcctaagggtctcatcttcggggaagatgaa
accgaggaggatgaagatatgagggacttggacctgctcacagtgaagagaaaagatgtc
ttcagtctggaggaagttgaccaggatgatgaggaaactgacagtaacaccattaagaaa
acagaaaaagagaccaagttcaaagaggccaagaaagtcctgaagagaaacttccaagtc
aacaccaaattagtcttcactgaagagggacagatggtgcagcagtggcccccgctccag
aggacggccgtgccagccacagagggggaggaggatgactgcacgtcgggcatcaatgtg
gaggaggccagagagaggctgcgccgagaggaccaggagtttgacaagctggagtacagg
cgtaaagtcaaagagaaacacagggagaagagactgaaggaaaacgctgccagaagagaa
gccagcaagcagtacgctgaggagcagaagtccggtgaggaggatgaagaggaggtggta
gcgtacctgggcggttctgatggagaagagtttgaccccagcacactgcccgacccggac
aaactacactacgactcagaggaagaagatgaccagatcagccctgctgctgggacgagg
aagcgcatccacagtgaccacatcgatgactcgggtgaagaagaagaagaagaagaagaa
gaagaagaagaagaggaggaggcggcagcggggagcaggaagagacccaggcaacaagca
accgccaagcccctggacaccggcctctctctggccgaggacgaagcactggtcctgcat
ctgctggggaaccggagctag
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