KEGG   Oncorhynchus mykiss (rainbow trout): 110537671
Entry
110537671         CDS       T07259                                 
Name
(RefSeq) cullin-5 isoform X1
  KO
K10612  cullin 5
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110537671
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110537671
   03400 DNA repair and recombination proteins [BR:omy03400]
    110537671
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     110537671
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     110537671
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 110537671
NCBI-ProteinID: XP_021479561
Ensembl: ENSOMYG00000005684
LinkDB
Position
12:complement(45030089..45072800)
AA seq 805 aa
MFVVLNMATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWD
DKGPAKIHQALKADILDFIKQAQVRVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQL
EITLMGKQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDS
QLVIGVRESYVNLCSNPDNKLQIYRDNFEKAYMDSTERFYRTQAPSYLQQNGVQNYMKYA
DAKLREEEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIRRNETESEY
GRSTPGTKGSASSELHLMFSLMDKVPSGIEPMLKDLEEHIMSAGLADMVASAETITSDSE
KYVEQLLTLFNRFSKLVKDAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKT
QPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHL
TRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQNFKECHKHNK
LALSGKPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHH
LMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLW
SLVAFPKLKRQVLSYDPVVGSPKDFAEGTLFYVNQEFSLIKNSKVQKRGKINLIGRLQLT
TERMREEENEGIVQLRILRTQEAIIQIMKMRKRITNAQLQTELVEILKNMFLPQKKMIKE
QMEWLIEHKYIKRDETDLNTFIYMA
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgttcgtagtcctgaacatggcgacgtctaatttgctaaagaacaaaggctccctccag
ttcgaggacaagtgggatttgatgcgtcccatcgttctgaagctgctccgtcaggagtca
gtcaccaagcagcagtggtttgacctcttctcagacgtccatgcagtatgcctatgggat
gacaagggaccggccaagatccaccaggccctgaaggcggacatcttagacttcatcaag
caagcacaagtgcgggtgttgagtcaccaggatgacacggcactgctgaaggcctacatc
gtggagtggaggaagttcttcacacagtgcgacatcctgcccaaacccttctgccagctg
gagatcacgctcatgggcaagcagggcagcaacaagaagtctaacgtagaggacagcatc
gtacggaagctcatgctggacacgtggaatgagtccatcttctctaacatcaagaacagg
ctgcaggacagcgccatgaagctggtgcacgccgagcgcctgggggaggccttcgactct
cagctggtcatcggcgtcagggagtcctacgtgaacctgtgctcaaacccagacaataag
ttgcagatctacagggataactttgagaaggcttacatggactccactgagagattctac
agaacacaggccccctcctacctgcagcagaacggagtacagaactacatgaaatatgca
gacgccaagttgagagaggaggagaaacgggcgttgcgctatttggagacgagacgtgaa
tgtaactctgtacaagcactgatggagtgttgcgtgaacgccctggtgacgtccttcaag
gagaccatcttggccgagtgtccaggcatgatcaggcgaaacgagacagagagtgagtac
ggccggagcactcccggcaccaaaggctcggccagctcagagctccatctcatgttctct
ctgatggacaaggtgcctagtggcatcgagcccatgctgaaggacttagaggaacacatc
atgtctgctgggctggccgacatggtggcctccgccgagaccatcacctcggactctgag
aagtacgtggagcagctcctcacccttttcaaccgcttcagtaagctggttaaagatgcc
tttcaggacgaccctcgcttcctcacagcccgagacaaggcttacaaagcagttgtgaat
gacgctactatttttaaattggaacttccgctgaagcagaaaggggtggggctgaagact
cagccagagtccaagtgtccagagttgctggccaactactgtgatatgctgctgaggaaa
accccgctgagcaagaaacttacatctgaggagatcgaggccaagctcaaggaagtgttg
ctggtgttgaagtacgtgcagaacaaagacgtgttcatgcgctaccacaaagcccatctg
acccgacgccttatcctggacatctccgctgacagcgaaatcgaggagaacatggtggag
tggctccgggaggtaggtatgcccgctgactacgtgaataagctggctcggatgttccag
gacatcaaggtgtccgaggacctcaaccagaacttcaaagagtgtcacaaacacaacaag
ctggccctatcaggtaaaccagcggactctgtcaacatcaagatcctgaatgcgggggcg
tggtcgcggagctccgagaaggtgtttgtgtcactgcccaccgagctggaggacctgatc
cctgaggtggaggacttttacaagaagaaccacagtggcaggaaactgcactggcatcac
ctcatgtccaatggcattatcacatttaagaatgaggtgggccagtacgacctggaggtg
accacattccaactggctgtgctgtttgcctggaaccagaggcctcgggagaggatcagc
tttgaaaaccttaagctggccacggagctgcctgatgccgagctccgacgcaccctctgg
tccctggtagcgttccccaagctaaagcggcaggtgttgtcctacgacccagtggtgggt
tcgcccaaagactttgcagagggcaccctcttctatgtcaatcaggagttttcactaata
aaaaactccaaggtccaaaaaagggggaagattaacctaattggccggcttcagctcacc
acagagcgaatgagggaggaggagaacgagggaatcgtccagctcaggatattgagaaca
caggaggccatcatccaaatcatgaagatgcgcaagcggatcaccaacgcccagctgcag
acagagctggtcgagatcctcaaaaacatgttcctacctcaaaagaagatgatcaaggag
cagatggagtggctcattgagcacaagtacatcaagcgggacgagacggatctcaacacc
ttcatctacatggcgtaa

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