Oncorhynchus mykiss (rainbow trout): 110537693
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Entry
110537693 CDS
T07259
Name
(RefSeq) POU domain, class 2, transcription factor 3 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110537693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110537693
03021 Transcription machinery [BR:
omy03021
]
110537693
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
110537693
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
110537693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110537693
NCBI-ProteinID:
XP_021479602
Ensembl:
ENSOMYG00000013879
UniProt:
A0A8C7PZ73
LinkDB
All DBs
Position
12:46053605..46078913
Genome browser
AA seq
432 aa
AA seq
DB search
MSTDGVEHSEAHHEQAGTERTASCPSLSHAVIQSATSCVGLFLETKDIEQRQIKTENLND
SLHAHKTCHPAQGSPIPGVQASQLSVELPSLHTMPQLVLMSGSHHLSSPSSFLLSQTQHT
GHQALLQQNLHNFPTQSQSGLLQHQPGLALTPQAMSRSGLTSSSMEGHVDMSHLQVPKHI
GAPQQDDPSDLEELEQFAKAFKQRRIKLGFTQGDVGLDMGKLYGNDFSQTTISRFEALNL
SFKNMCKLKPLLEKWLSDAENSPSDSMANVASLPPLMEGYGRKRKKRTSIETNIKFTLEK
RFLDNPKPNSEEITLISEQLSMEKEVVRVWFCNRRQKEKRIYCPVSTSPMKSHNFNPRMP
SCNTLFQASTSRSYSPLASGGVSSSPSPNSPSHGPSLGALSSGSPALTSQVNQSFSSPGS
WYRTWNPMPYHH
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagatggtgtggaacactcagaggctcaccatgaacaagcagggacggagagg
accgccagttgcccatccctgagccatgctgttatccagagcgctacttcatgtgtaggc
ctattcttagaaactaaagacattgaacaaagacaaattaaaacagagaacctcaacgac
tctctccatgcacacaaaacatgtcacccggcacaaggatcaccaatacctggagtccag
gcaagccagctgtcagtggagctcccctccctccacaccatgccgcagctggtgcttatg
tcaggctctcaccacctctcatccccctcctccttcctcctctctcagacacaacatacg
gggcatcaagcacttctgcagcagaatctgcacaactttcccacccagagccagtcaggt
ctcctccagcatcagcctgggttagcactaacacctcaggccatgagtcggtcgggcctg
acgtcgtcgtccatggaaggacacgtggacatgtcccacctgcaggtccccaaacacatc
ggggccccccagcaggacgatcccagcgacctagaggagctggaacagtttgccaaggcc
ttcaaacagagacgcatcaaactgggcttcacccagggtgatgtaggcctggatatgggg
aaactgtatgggaatgacttcagtcagactaccatctcccgcttcgaggcactcaacctg
agcttcaaaaatatgtgcaagttgaagccgctactggagaagtggctgagcgacgcagag
aattctccctcggactctatggccaacgttgcctctctaccccccctgatggaaggctat
ggaaggaaaaggaaaaagagaacaagcattgaaaccaacatcaagttcaccctggagaaa
cgctttcttgacaaccccaagcctaactcggaggagatcacactgatctcagagcagctg
tctatggagaaggaggtggtgcgggtgtggttctgtaaccgtagacagaaggaaaagagg
atctactgccctgtgtccacctcacccatgaaatcacataacttcaaccccagaatgcct
tcatgtaacaccctgtttcaggcctccacgtccagatcatacagccctcttgcttcagga
ggagtgtcatcgagtccctctcctaatagtcctagtcatgggccttcgctcggcgcactc
tcgtctggctcccctgctttgacctcccaggtcaaccaatccttcagctcaccagggtcg
tggtatcgcacatggaaccctatgccctatcaccactga
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