Oncorhynchus mykiss (rainbow trout): 110537723
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Entry
110537723 CDS
T07259
Name
(RefSeq) protein transport protein Sec24A isoform X2
KO
K14007
protein transport protein SEC24
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110537723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110537723
Membrane trafficking [BR:
omy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110537723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
110537723
NCBI-ProteinID:
XP_021479729
Ensembl:
ENSOMYG00000019934
LinkDB
All DBs
Position
12:complement(49798515..49819421)
Genome browser
AA seq
1120 aa
AA seq
DB search
MLGLWVFVFTVETFSNQSVPLCSHSVSVKEQHALNPGPSQNPVALQPPGPGYMAHQTPYN
PMQAKGPMPPGPGLYNSGPYQPVPPVSSNQALPGQPMLKRPPMGPQHSMTPPQSASPNPG
SRIPPAHATPPPVSANNYQHAPAWQYGGTPPMGAPPPMAMPPLRPAGNHMTSSPSLATPQ
ASSAEYRATPPVFHNAMQPLCPPTSLQGYTQQGSAPLLMNPMAAPHSYQPGMRAPYGGPP
PSVRPTPPTTGPPMGNATPPLGPKTDGHMPTPGNGAQVPNSFDHLEMGPKMAGPLPPQQP
SPPTRHMGLSYPSLPPGYQNTSAPPNAATMQHPVQPSTQPYSHPQPYQQPSAGPAQLSPS
LSGLSLQSQTPEALRVVNLLQERNLLPLGPVTPPTPCLPQDLQKINCHPEVFRSTLTSIP
QTQSLLNKAKLPLGLLLHPFKDLSQLPVVTSSTIVRCRSCRTYINPFVTFLDQRRWKCNL
CYRVNDVPEEFMYNPVSRSYGEPHKRPEVQNATLEFIAPSEYMLRPPQPAVYLIVLDVSH
NAVETGYLDVVCQSLLENINALPGDSRTKIGFITFDSTIHFYNLQEGLSQPQMLIVSDIE
DIFLPTPDSLLVNLNECKELVQDLLRSLPQMFGKTMETQCALGPALQAAFKLLSATGGRV
SVFQTQLPSLGVGALKSREDPNQRASAKDIQHLSPATDFYKKLALDCSGQQVAVDLFLLS
SQYCDLASLGCISRYSAGSVYYYPSYHQQHNPAGVECFQKDLKRYLTRKIGFEAVMRIRC
SKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGFAVQMSIEENLVDMQSVSFQAALLYTSSK
GERRIRVHTMCLPVVNSLSDIFAGADVQAITCLLASMAVDRSVTASLSDARDAMTNASID
SLTSFRTSVLTIQQPGLLAPACLRLFPLYILALLKQKAFRTGTSTRLDDRVYAMCQLKYQ
PLAYVMLMIHPALYRVDDLTDEGALNVSERTIPQPRVQQLSVEKLSRDGAFLMDAGSVIY
LWIGRNCNPNFLTQVLGLPNYAAVPLNMNMLPELDTAESQRTRAFVGWLREQRPFFPILH
VIRDESPLKASFLQNMIEDRTESALSYYEFLLHIQQQVSK
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgctgggattatgggtttttgtcttcactgttgagacgttttctaatcagtctgttcct
ctctgttcacactcagtgtcagtaaaggagcagcatgctttaaatccaggtccctctcag
aatccagtagcgctgcagccaccgggaccgggttacatggcccaccagactccatacaac
ccaatgcaagccaagggccctatgccgcccggccctggactctataactctggtccctac
cagcccgtcccaccagtcagctctaaccaggcccttccaggtcagcccatgttaaaaagg
cctcctatgggacctcaacattccatgaccccacctcagtctgccagccctaacccaggc
tccaggattcccccagcgcatgccacccctccacctgtgtctgctaacaactaccagcac
gccccagcctggcagtatggggggactccaccaatgggggcaccgcctcctatggccatg
cctccccttcggcctgcgggtaatcacatgacctcctcgcccagcctggcaaccccccag
gcctcctcggcagagtaccgcgcaacgcctcctgtcttccataatgccatgcaacccctg
tgtcctcccacctcgctccagggatacacccagcaaggctctgcccctcttctgatgaac
cccatggcggctcctcactcataccagccaggtatgagagcaccttacggcggcccccca
ccctctgtgagacccaccccacccactactggaccccccatgggcaatgccacccctccc
cttggccccaaaactgatggacacatgcccacacctggtaatggtgctcaagttcccaac
agctttgatcacttggagatgggccctaaaatggctggcccactcccaccccagcagcca
agcccccctactcgacacatgggtctatcctacccctctctacccccggggtaccagaac
acctcggcaccccctaatgccgccaccatgcaacatcccgtgcagccctcgacgcagcct
tacagccatcctcagccataccagcagccctctgcaggtccagcccaactgagcccctcc
ttgtctggtttgagtctgcagtctcagaccccagaggccctgagggtggtcaacctgctg
caggagaggaacctgctccctctgggcccagtcacccctcctacgccctgcctgccccag
gacctgcagaaaatcaactgccacccagaggtcttccgcagtaccctgaccagcatcccc
cagacccagtcgctgttaaacaaagccaagctcccactcggcttgctcctccaccccttc
aaagatctctcgcaactgcctgtggtcacctccagcactatagtgaggtgtcgctcctgc
aggacgtacatcaacccctttgtgaccttcctggaccagaggagatggaagtgtaacctg
tgttaccgggtcaacgacgttccggaggagttcatgtacaacccagtcagcagatcgtat
ggcgagccacacaaaagacctgaggtccagaatgctaccctcgagttcattgcaccatca
gaatacatgctgagacccccccagcctgctgtttacctcatcgtgctggacgtatcccac
aatgccgtggaaacaggatacctagatgtcgtctgtcagtcactgctagagaacatcaat
gcgctccctggggactcgaggacaaagattggcttcatcacatttgacagcaccatccac
ttctacaacctccaggagggcctgtcccaaccacagatgctcatagtctccgacatcgaa
gatatatttttaccgacaccagacagccttttagtgaacctcaatgaatgcaaggagctg
gtgcaggatttgctgaggagcttaccccagatgtttggcaagaccatggagacccagtgt
gctctgggcccggccctgcaggcagcgttcaagctgctatcggccaccggagggcgtgtg
tccgtcttccagacccagctgcccagtctgggtgtgggggccctcaagtccagagaggac
cccaaccagagggcttctgccaaggatatccagcacctttctcctgccacagacttctat
aagaagctggccctagactgttcaggacagcaggtggctgtggatctgttcctactgagc
tcccagtactgtgacctggcctctttaggttgcatatccaggtactcagcgggaagtgtg
tactactacccctcctaccaccagcagcacaatccagccggggtagagtgcttccagaag
gatctcaagaggtacctcacccgcaagatcggcttcgaggctgtcatgaggatacgctgc
tctaaaggcttgtccatccacacgttccatgggaacttctttgtgcgctccacggacctg
ctgtctctgcccaacgtgaacccggatgcaggcttcgctgtgcagatgtccattgaagag
aacctggtggacatgcagtctgtctccttccaggctgctttgctctacacgtccagcaaa
ggagagcgacgaatccgagtccacaccatgtgtttgcctgttgtcaactccctatccgac
atcttcgctggggctgatgtccaggccatcacttgcctgctggctagcatggctgtggat
cgctctgtgacggccagtttgagtgacgccagggacgcgatgaccaacgcatccatcgac
tctctgacgtccttccgcacctctgtactcaccatccagcagcctggcctcctggccccc
gcctgcctcagactgttccccctctacatcctcgccctgctcaaacagaaagccttccga
acgggtacaagcaccaggctggacgaccgtgtgtatgccatgtgtcagctgaagtaccag
cccctggcctacgtcatgctgatgatccacccagcgctgtaccgtgtggacgatctgact
gacgagggagccctgaacgtcagtgagcgcaccatcccccagcccagagtccagcagttg
tctgtggagaagctgagcagagatggggccttcctcatggacgctggctcggtaatctat
ctctggattggaagaaactgcaaccccaacttcctcacgcaagtcctggggctcccaaac
tacgctgctgtgcccctgaacatgaacatgctcccagagttggacactgcagagtcccag
agaaccagagcgttcgttggctggctgagggaacagaggcccttcttccccatcctgcat
gtcatcagggatgagagtccactgaaagccagcttcttgcagaacatgatagaggaccgg
acagagtcggccttgtcttactatgagtttttactccacatccaacagcaagtctccaag
taa
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