Oncorhynchus mykiss (rainbow trout): 110537729
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Entry
110537729 CDS
T07259
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K02620
transcription factor 7
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04310
Wnt signaling pathway
omy04520
Adherens junction
omy04916
Melanogenesis
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110537729
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110537729
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
110537729
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110537729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110537729
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
110537729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110537729
NCBI-ProteinID:
XP_021479739
Ensembl:
ENSOMYG00000020060
LinkDB
All DBs
Position
12:complement(50051772..50120821)
Genome browser
AA seq
511 aa
AA seq
DB search
MPQLSSGGGDDLGANDEMISFKDEGDQDEKIQENAFTERDLADLKSSLVNESETNQSPNA
AAVRRGQQNEHRGYQEKHREHLDGVSKHQDGGMYKTAYPGYPFLMLPDPYIPNGSMSPSS
NKVSVVQQSHGMHPLTSLLPYSNDHFNPSPPHLPTDMSQKGVHRPQSQDISGFYSLPQGG
VGQMPPSMGWQSQPVYPLSSCGFRQPYSSSLPNSSSYPRFSHSLMLGPGMHSTGIPHPAI
VPPSGKQDHHDHYDRNVYAKPHQEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTL
KESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYEAGLREGAGEK
NKADWGKKKRRKREKQQDSTTDPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLQGGWC
ASPTSSDGSAIDSPPSPVDGVPLQHPSLPSSPSPASPSHIPLHPQPSKQHTPRILLKPKT
TELSLKALIESSQQHDNLNHHHHDCTLPKSH
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagcagcggcggaggagatgatcttggagcgaacgatgaaatgatatcc
tttaaggatgaaggcgatcaagatgagaaaattcaagaaaacgctttcacagaaagggac
ttagctgacctcaagtcgtctctggtgaatgaatccgagacgaatcaaagtccgaacgca
gcggcggtcagacggggacagcaaaacgaacacagaggttatcaagagaaacaccgggag
catctcgacggcgtttccaaacatcaagatggaggaatgtacaaaacagcgtatccaggg
tacccgtttctcatgctgcctgacccatacatcccaaacggatcaatgtccccatcttcc
aacaaagtttcggtggtccagcagtctcacgggatgcaccccctgacgtccctgttgccg
tacagcaatgaccacttcaaccccagcccccctcacctgcccacagacatgagccagaaa
ggcgttcacaggccccagtcccaggacatctcaggcttctactccctacctcagggcggt
gtgggacagatgcccccctccatgggctggcaaagtcagcctgtctatcccctgtcctca
tgtggattcagacagccctactcctccagtctccccaacagctcttcctaccccaggttc
tctcattctctgatgctagggccaggcatgcactcaacagggatcccccatccagccatc
gtgccaccttcaggcaaacaggaccatcatgaccattacgacaggaacgtgtacgctaag
ccacaccaggagcccaagcgggagaaggagcctaagaagccagtgatcaagaagcctctg
aatgctttcatgctgtacatgaaggagatgagggccaaggtgatcgctgagtgcacgctg
aaggagagcgctgccatcaaccagatacttggcagaaggtggcacgctctgacccgggag
gaacaggctaaatactatgagctggccaggaaggagcggcagctacacatgcagctctac
cccagctggtccgccagagacaactacgaggcgggccttagagagggcgcgggggaaaag
aataaagctgattggggcaagaagaagagaagaaaaagagagaagcagcaggactccacc
acagaccctggctctcctaagaaatgcagagctcgcttcggcctcaaccaacaaacggac
tggtgtggtccctgcaggaggaaaaagaagtgcattcgataccttcaaggaggatggtgc
gccagccccacttcttccgatggaagcgctatagactcgcccccctcccccgtcgacggc
gtcccccttcagcacccctccctgcccagctcgccctcgcctgcttccccctcacacatc
cctctgcacccccagcccagcaaacaacacacaccccgtatcctcttaaaacccaagacc
acagaactctctctcaaagctttaatagaatcatcccaacagcacgacaatctcaatcat
catcatcatgactgtaccctgcccaagtctcactag
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