Oncorhynchus mykiss (rainbow trout): 110537754
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Entry
110537754 CDS
T07259
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04080
Neuroactive ligand-receptor interaction
omy04082
Neuroactive ligand signaling
omy04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110537754
04082 Neuroactive ligand signaling
110537754
04519 Cadherin signaling
110537754
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110537754
Ion channels [BR:
omy04040
]
Ligand-gated channels
GABA-A
110537754
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
110537754
NCBI-ProteinID:
XP_021479792
Ensembl:
ENSOMYG00000005834
UniProt:
A0A8C7NSB5
LinkDB
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Position
12:52026941..52065172
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AA seq
451 aa
AA seq
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MAFVFTFFFLSCVSNVWGNNPKSTEIDGNIYLDNITRILDRLLDGYDNRLRPGFGGPVTE
VKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRLNNLMVSKIWTPDTF
FRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNFPMDGHACPLKFGSY
AYPMSEIVYTWKKGPLFSVEVPEESSSLLQYDLIGQTVSSERLKSNTGEYVIMTVHFHLQ
RKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKV
SYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKVAAIKAAQEAAEAGRSDGE
SSSDASSVLKKRMNSTPHFERPAEVFPNPPVNAQAFLQQGSAVPSNNLLTGTSIIDKYSR
ILFPLSFGAFNLVYWIVYLTKDTMEMTRDSV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgttttcactttctttttcctgtcctgtgtgagcaatgtttggggaaataat
ccgaaatcgaccgagattgatgggaatatctatttggataacattacgcgtatattggat
agattactagatggatatgacaacagactgcgacctggatttggaggtccagttaccgag
gtcaaaacagacatctttgtaaccagctttggtccagtgtcagatgttgagatggagtac
accatggacgtatttttccgtcaaacgtggattgacgagaggttgaaattcgagggcccc
atcgagattctgcggctcaacaacctcatggtcagcaagatctggacgccagacacattc
ttccggaatggcaagaggtccatctctcacaacatgaccactcccaacaagctgttccgc
atcatgcagaacggaactatcctctacaccatgagattgactataaatgcggagtgtccc
atgcgactgatgaacttccccatggacggccatgcctgtcctctcaagtttggtagttat
gcctaccccatgagtgaaattgtgtacacatggaaaaaaggaccactgttctctgtggaa
gtaccagaggagtcctccagcttgctacagtacgatctaataggacagacagtgtccagt
gagaggttaaaatccaacacaggtgaatatgtaatcatgactgttcacttccacctgcaa
aggaagatgggcttcttcttgattcagacatacattccctgtatcatgacggtgatcctg
gctcaggtctctttttggatcaataaggaatctgttcctgctcgaactgtatttggcatt
accactgtgctaaccatgaccacactcagcatcagcgcccgccactctctgcccaaagtt
tcctacgccacggccatggactggtttattgccgtatgtttcgccttcgttttctcagcc
cttatcgagtttgcagcagtcaactacttctccacgctgcaggccaaccgggagctccgc
aaggtggctgccatcaaggcagcccaggaggctgcagaggccgggaggagtgacggggag
tcctcttcggacgccagcagtgtgctgaagaagaggatgaactctacgcctcactttgag
aggccagcggaggtgttccctaaccccccagtgaatgcccaggccttcctccagcaaggc
tcagccgtgccgtccaacaacttactgacaggcaccagcatcatagacaagtactcacgc
atcctcttccctctgtcgttcggggccttcaacctagtctactggatcgtctatcttacc
aaggacaccatggagatgacaagagacagcgtgtga
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