Oncorhynchus mykiss (rainbow trout): 110537867
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Entry
110537867 CDS
T07259
Name
(RefSeq) uncharacterized protein LOC110537867 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110537867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110537867
Membrane trafficking [BR:
omy04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
110537867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
110537867
NCBI-ProteinID:
XP_021479974
UniProt:
A0A8K9V7D8
LinkDB
All DBs
Position
12:58875401..58917409
Genome browser
AA seq
1544 aa
AA seq
DB search
MMSLIELNDDQRWVPTHVNVTVLRARGLRTKGKHGSRYVYTIIQVGKDKYTTGLVEKATV
PEWNEECCFELLPGILEAGGRSAFPSGSGDLVLTVMHRVLIGLDVFLGQAIVPLDKIFQD
GMCPRDEWLKLNSKASRKEKERGEIQVTVQFTRNNMTASMFDLTMKDKPRSTFGKLKDRV
TGRKRDDMESSSAIVPGRFAALSSSLGQPFGEGSGGGEDPGEVEVAEEKRSKVKDFFLGK
GKLRRSSDTWSCSSLASESSVSSTTSESHCPPSLGLGLLVDPPSSPIYSSKVKDTHHGDT
DLAKKVLTTTQSSPKILTHKRAFSDEASRITTTAIPRPCPAVESLKGHGMTLSQSSLCIN
GSHVYGSEPVGPKGSSTLPSKLVLLEKCSPLSRSLQNLTKRSEDKGSAGEGRRWSFDKVK
KDEKDEEKEAEPPVSQFQSARVGGRPVQAAAPMLSSTTTVDSADKGKKLRKTLFSGGRSD
SLPAKSELSQGSPPPEGRLRGWFGSSDSQNKPRLEVSPKVESESDTPPPLPPRSPIPLQC
SSPSASFTGHSSPDSAHPTNPFTPSLSLTPDPISPFNPFLPRMQCNPFFEDLIAEEGQKS
PPFATCSPVTPLCHSTALPSVTSPTHDPAVQIEMAAIWRDQPKPVARQTSLPALLPTPAT
ASPPNPFTSRSISESGGGEWDESFDAFASSRLNSPKGSPTNHPSIATSRQAQVRSTPPYE
SYTIPPIEEMRMSEEEEPPRLPPRRPIIRTLVNERPSDSWLHRGQELAVQKEACLLSQTG
AASLQHTREWGHKRHTPSPHLYPSPGKDLVSSDLLDFHTVHSQHYANMSPESPSPFKSED
EFKKFDYEPLRDEDDKIIFTEQDLWPDATDSIISLASEDTTDASPTVRKYAIVKNTSHSE
LKDLSLPVMLLNSERTVADLLTKSCPKHSKSGLKTLDIASTPPDLTTDSFSIHPDKPTKS
RNNNYESPPLTLEDLNKNKSDSDFCFIDSASDASPSPSDMMTVHTLKSLGGICPQPPQDT
PIALSHEQMMLYAEDMLIVQKTSTIDVNSAVIVNLPEVSSLCQDNCLDGGCELNTSRRDS
ASNMKSISIFKPDSLNIERETVELKDTQSPMDRNGNITKSKIDSSKLDPLCHVRSFPVSS
QMEMQQEVVRNKQEVSQPLAKRTNPVSESSPRGTSSHRSLKGMIRELHGNSDANSPGKGL
GESPLHQSRSSGQIISESIEGPFSYQPTKSPFSSPLSPNRETTLKAATLFVSSQKIHTHS
STQSIPKENCLTEHSSSKYAGAISFEDLHAKVAPNVRSPMSARLRPGTTVHASNPCASNP
SSATPSLATETNGQAKLPPTPVPPSIHHPPTVRPSTGASATLAVAPYTSSFFSSSSSYTT
AQPLVDARHTLLPEETQPASSLPRQESSPHPVKPLTTTASQGEKKECRSVLEKLKSSIHP
GRSAQQTLAVAETEKKIEESLADSSAQYEQLTNMELISLLLQQEMDMEKQQVASDQQAAM
LEKHEAELKKIKAQVRDLEDYIDKLLVQIMEQTPTLLQVRSRHK
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcacttatagagttgaacgatgaccagagatgggtgcctacacatgtgaatgtc
actgtccttcgtgcaaggggtttgcggacgaagggcaagcacgggagccgttatgtttac
accatcattcaggttgggaaggataaatacaccaccggtttggtcgaaaaggcgactgtg
ccagagtggaatgaggaatgttgtttcgaacttctccccggaatactggaggctgggggt
cgcagtgcatttccttcagggagcggcgacttggtcctcaccgtcatgcaccgggtgctt
atcggacttgacgtgtttcttggtcaagcaatcgtccccctggataaaatatttcaagat
ggaatgtgtcctagagatgaatggctcaaactcaactccaaggccagccggaaggagaag
gagcgtggcgagatacaggtaacggtccagttcacgcgcaacaacatgacagccagcatg
ttcgaccttaccatgaaggacaagccgcgctctaccttcggcaaactcaaggaccgcgtg
acggggaggaagagggacgacatggagtcctcctcggctattgtgccgggacgcttcgcc
gccctgtcgagttccctggggcagccattcggggaggggagcggagggggagaggacccc
ggggaggtagaggtagccgaggagaagcggagcaaggtgaaggattttttcctgggtaag
ggaaagctgcggaggtcttctgacacatggtcgtgttcgtcgctggcctcagaaagcagc
gtgtcgtccacgaccagtgaaagccactgtcccccttctctgggtctaggcctcctggtg
gacccccccagctcccccatctacagcagcaaagtcaaagacacccaccacggagataca
gacctagctaaaaaagtgcttaccaccacacagtcttccccaaagatactgacccacaag
cgagccttcagcgacgaggcaagtaggatcaccacgactgccattccccggccctgtcct
gctgtggagtccctcaagggtcacggtatgactctctcccaatcctctctgtgcatcaac
ggaagccacgtctatggatctgaaccggtgggtcccaagggctcaagcacccttccatcc
aagctggtcctgctcgaaaagtgctcccctctctctcgttcgctgcagaacctcacaaag
cggagcgaggacaagggttctgccggcgagggccggcgctggtccttcgacaaggtaaag
aaagacgagaaggatgaggagaaggaggccgaacctccagtctcccagtttcaaagtgct
cgggtggggggtcggccagtgcaggcagcagccccgatgctgtcttctactaccacggtg
gactcagcagacaaagggaagaagctcagaaaaacattattctccggagggaggagtgat
tctctacctgccaagtccgagctgagccagggttctcctccccctgaggggagactgcga
ggctggtttggctccagtgactcccagaacaagccaaggctggaagtttctcctaaggta
gaaagcgaatcagacaccccgcctcctctcccccctcgctcccccattcccctccagtgc
tcgtctccctctgcttctttcactggccattcctcgcccgacagtgcccatccaactaac
cccttcactccctctctctctctgacccctgaccccatctctcccttcaaccccttcctc
ccgcgtatgcagtgtaaccccttttttgaggacctcattgcagaagagggccagaagtcc
cccccttttgctacctgctcccccgtcacacccctctgtcattccacagctttgcctagc
gtcaccagtcccacccacgatcccgccgtgcaaattgaaatggccgccatatggcgagac
cagcccaagcctgtagccaggcagacgtccctccctgccttacttccgacaccagcgacg
gctagcccccccaatccgtttacgtctcgctccatatcagagagtgggggaggagaatgg
gatgagtcctttgatgcctttgcctccagcagactgaattcgccaaagggctctcctacc
aatcacccttcaatagcaacctcaaggcaagcccaagtaagaagcactcctccatatgag
agttacactattccacccattgaggagatgaggatgagtgaagaagaagagcctccacga
ttgcctccacggaggcccataatacggactctggtgaacgagagaccttctgacagctgg
ttgcacaggggtcaggaactggcggtgcagaaagaggcctgtctcctgtcacaaacaggc
gcagcttccctacagcacacaagagaatgggggcacaagagacacacaccaagtccccac
ctgtacccaagcccaggcaaagaccttgtcagtagtgacctgttggactttcataccgta
cactcacaacattatgccaacatgtctccagagtctccatctccattcaagtctgaagat
gagttcaagaagtttgactatgaaccattacgagatgaagatgataaaattatatttact
gagcaggacctatggccagatgcaacagattcaataatatcgttggcttcagaggatacg
acggacgccagtcccactgtaagaaaatatgctattgtaaagaacacttcacattctgaa
ctcaaagacttatctctgccagtaatgcttcttaatagtgaaaggactgttgccgatcta
ctgactaagtcttgcccaaaacactctaaatcaggtcttaagactctagacattgcttca
actccaccagacctaacaacggactcgttctcaattcacccagataagcccaccaagtcc
agaaacaacaattatgaatcacctccgctaaccttagaagaccttaataaaaacaaaagt
gactcagatttttgttttattgactctgcttctgatgcttccccatctccatctgacatg
atgacagtgcataccctcaaaagtttaggtggcatttgtcctcaacctccacaagatact
cccatagcattatctcatgagcagatgatgctatatgcagaagatatgctaattgttcag
aagactagtactatagacgtcaactctgctgtaatagtgaacttaccagaagtctcctcg
ctttgtcaagacaattgtctagatggaggatgtgaattgaatacatcacgcagagattct
gcaagcaatatgaagagcattagcatttttaagcctgacagtcttaacatagagagagag
actgtagaattaaaagacactcaatctccaatggatagaaatggcaacattacaaaatca
aagatagacagttcaaaactagaccctttatgtcatgttagatcttttccagtttcgtcc
cagatggaaatgcaacaggaagttgtacgcaataaacaggaagtgagtcagcctctggcc
aaacgaaccaatcctgtcagtgagtcttcaccaaggggcactagttctcacagaagtctc
aagggaatgatacgggagctccacggcaacagtgatgcaaatagccctggcaaaggatta
ggtgagagccctcttcaccaatcacggtcttctgggcaaataatctcagagagcattgaa
ggaccgttctcatatcaacccaccaaatctcctttttcctcacctttgtcaccgaataga
gagacaacgctcaaggcagccacattatttgtgtcctcgcaaaaaatacacacacatagt
tccactcagtcaattccaaaagaaaactgcttaacggaacattcctcatccaaatatgct
ggggcgatcagctttgaagacctccacgccaaagtagccccgaacgtgagaagccccatg
agtgccaggttaaggcctggcaccacagtgcatgcttccaacccctgtgcttccaacccc
tcctctgctaccccctccctggcaactgaaactaatggccaggctaagctgccccccacc
cctgtccccccctccatacatcaccccccgaccgtgaggcccagtaccggagccagtgcc
accttggctgtggccccctacacctcttccttcttctcctcctcttcctcctacaccact
gcccagcccttggtcgatgcacggcacacacttttgcctgaggagacacagccagctagc
agcctgccccgacaggagagcagcccccacccagtgaagcccttgaccaccacagccagt
cagggggagaagaaagagtgccggtcagttctggagaagctcaagtcttccatccaccca
ggccgctctgcccagcagacactggccgtggctgagactgagaagaagattgaggaatcg
ttagcagacagctctgcccagtacgagcagctgacaaacatggagctgatttcccttctg
ctgcagcaggagatggatatggagaagcagcaggtggcctccgaccagcaggcggcaatg
ctggagaaacacgaggcggagctgaagaagatcaaggcacaggtgcgcgacctagaggac
tacatcgacaagctgctggtgcagatcatggagcagacacccacactcctccaagtgcgc
tcccggcacaagtga
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integrated database retrieval system
