Oncorhynchus mykiss (rainbow trout): 110537992
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Entry
110537992 CDS
T07259
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00310
Lysine degradation
omy00514
Other types of O-glycan biosynthesis
omy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110537992 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
110537992 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
omy01003
]
110537992 (colgalt1a)
Enzymes [BR:
omy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
110537992 (colgalt1a)
Glycosyltransferases [BR:
omy01003
]
O-Glycan biosynthesis
O-linked Gal type
110537992 (colgalt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
CAP59_mtransfer
Motif
Other DBs
NCBI-GeneID:
110537992
NCBI-ProteinID:
XP_036793956
Ensembl:
ENSOMYG00000039960
UniProt:
A0A8C7WAM4
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Position
12:complement(63737730..63765619)
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AA seq
609 aa
AA seq
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MHGYNFFLSTALTILFSGPAQGYFPEERWSPESPLLAPRVLIALVCRNSEHSLPYFLGNI
ERLNFPKDRVAIWVATDHNVDNTTAILRDWLVKVQKLYHYVEWRPQEEPTEYQDADSPKQ
WTNLRYAHVMKLRQAALDSARDMWADYFMVADCDNLLTNPNVLWKLIKEKKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKEASRQLAFHP
PHPDYSWAFDDIIVFAFSARMADVQMFLCNRETYGYFPVPLRAHNSLTDEADSFLHSLLE
VNVRNPHVLPSEYIPAPIKIQDKLGFDEVFMINLKKRTDRRDRMLRTLYEQEIACKVIQA
VDGKAMNISEINALGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIAERGLKSSLVI
EDDLRFEVFFKRRLMNLMSEVESQGLDWDLIYIGRKRMQVDRPEKSVPNIHNLVEADYSY
WTLGYMMSLQGAQKLLRAEPLKRILPVDEFLPVMFNKHPVSDYMEQFEVRDLKAFSAEPL
LVFPTHYTGDAGYISDTETSVVWDNEKVRTDWDRARSGKTQEQAEISSEAQNSDVLQSPL
DSTATRDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggtacaacttctttctgtccaccgccctgacgatactgttctccggaccagct
caaggatacttccccgaagagcgctggagccccgaatctccacttcttgccccgcgggtc
ctcattgccctcgtctgccgcaactctgaacattctctgccttatttccttggaaatatc
gaacgtctgaattttcccaaggaccgcgtggcaatttgggttgcgacggatcacaatgtg
gacaacactacagccatcctgcgtgactggctcgtcaaggtccaaaaactgtaccactat
gtggagtggaggccgcaggaggagcccacagagtaccaggatgcagacagcccgaagcag
tggaccaacctccgctatgcacacgtgatgaagctacggcaggcagcactggactccgca
agagacatgtgggcagactacttcatggtagcggactgtgataacctattgaccaatcct
aatgtactgtggaagctcatcaaggagaagaagacgatcgtagcgcccatgttagagtcc
cgtgcagcttactccaacttctggtgtggcatgacctcccagggttactataagcgtacc
ccggcatacatccctatgagaaagcaggtgcgtaaaggatgcttcgcggttcccatggtg
cactccaccttcctgattgacttgaggaaggaggcgtcacgccagctggccttccacccc
cctcacccagactatagctgggccttcgatgacatcattgtcttcgccttctcagctcgc
atggcagatgtgcagatgttcctatgtaacagagagacttatgggtatttccccgtgcca
ctgcgagcccacaactccctgacagacgaagcagacagcttcctacattccttgttggag
gtcaatgtgcggaaccctcatgtgctgccctcggagtacatcccggcccccataaagata
caagataaactgggctttgatgaggtgttcatgatcaacctaaagaaacggaccgaccgg
cgggatcgcatgctgaggactctgtacgagcaagagattgcctgcaaggtcattcaagcg
gtagacggcaaagcgatgaacatcagtgagatcaatgccctggggatccacatgctacca
ggctacagtgatccgtatcacggcaggcccctcactaagggagagctgggctgcttcctc
tcacactacaacatctggaaagagatcgcagagcggggtctaaagagttccctggtgatc
gaggacgatctgcgtttcgaggtcttcttcaagcgacgcctgatgaacctgatgagtgaa
gtggaaagccagggtctagactgggacctgatttatatcggcaggaagaggatgcaggtg
gaccgccctgagaagtctgtgcccaatatacacaacctggtggaggccgactactcctat
tggacgctgggctatatgatgtcattacaaggagcccagaagctgctgagggcagagccg
ttgaagaggatattacccgtagatgagttcctccctgtcatgttcaataagcaccctgtc
tcggactacatggagcagtttgaggtgcgagacctgaaggccttctcggccgagcctctg
ctagtattccccactcactacacaggagacgcgggctacatcagcgacacagagacctcc
gtggtgtgggacaacgagaaggtccgtacggactgggaccgggcccgctcggggaagacc
caggagcaggcggagatcagcagcgaggcccagaactctgatgtactccagtcacctctg
gacagcacagccacacgggacgaactatga
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