Oncorhynchus mykiss (rainbow trout): 110538040
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Entry
110538040 CDS
T07259
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
110538040 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110538040 (srebf1)
04131 Membrane trafficking [BR:
omy04131
]
110538040 (srebf1)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
110538040 (srebf1)
Membrane trafficking [BR:
omy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
110538040 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
110538040 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
ZapB
Motif
Other DBs
NCBI-GeneID:
110538040
NCBI-ProteinID:
XP_036794889
Ensembl:
ENSOMYG00000042611
LinkDB
All DBs
Position
12:87113193..87147513
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AA seq
1174 aa
AA seq
DB search
MNLSFDDQSLDNLDPTISLNDPSDIDTALLNDIDDMLQLINNQDMVEFNQDMAGLFDPPQ
FTGVTPTQDLPALSLPHSTTSPPSTTSSILSSSPHLDALLGPPIIRSSSPPDKAFHPPTF
QQSPLAQVTTSTPVPLPRPQPAPQQGSPSAQAAQGLRESKVDLPLPVLSPPAPVPVQLPP
PASSPHTVPGQSPVFSAAPQALFTSPAPQQSQAHTQQIRINYSTHNGYKAVNHQGGPAQP
MVSLSSSPSGVQPMTIQALTTTAPLLTTSASPPAQTIASHHIQQVLLQPQFIKAESLLLT
TLNRDPCMVTTVASPCITSLATTTSQSTHSLQALMSGGTFLTTVPVMMDSDKLPINRITI
SSKPMGLPPKGEKRTAHNAIEKRYRSSINDKILELKDLVAGTEAKQLNKSAILKKAIDYI
RYLQQSNQKLKKENMALKMSAQKNKSLKDLVAMEVDGPQTDVKSELPTPPPSDVGSPTSY
SHCGSDSEPDSPMGEDSKPAVNLMDTSSSTPGSAGMLDRSRMALCTFTFLFLSLNPLAAM
LCGGMGSSTTANNQAVHPGTGRIMLGLDNAADSWGWMDWVLPTLLVWLLNGVLVAGVLVR
VLVYGEPVTRPHSGSSVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPTSQLDL
ACAALWALLRLCLQRLGVGRWLAARAGGLRARGLREDARMSSRDAALVYHRLHQLHMTGK
LGGSHLSAVHMALSAVNLAECSGSCLPVATLGEIYVSAALRVKASLPRLLHFSSRVFLSS
ARQACLSSSGSVPPAMQWLCHPLGHRFFVDGDWAVRSTPKDSIYSQAGNTVDPLAQVTQA
FREHLLEKALYCVAQPQGEKTPSDGEGEYADALEYLQLLTSASDAAGANTQSFAIGSNMA
TVTGCDLHSKWWSSVAVVIINWLQGDDAAAERLYPAAEHLPRSLQTAESPLPKASLNTFR
AVRAMLTKPENCQLSLSHSERASGLLRDSLNLGPHCHSSSLDKVVQLLLCDLLLVMRTNV
WRLQQSSSPGGLSLQASPAELHGFQQDLSSLRKLAQSFRPAMRRLFLHEATARLMAGASP
TRTHQLLDRSLRRRATPGAKTEECEMRPGQREQAEAVMLACRYLPPSFLSAPGQRVGMLA
DAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTSA
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgtcttttgacgatcagtcactggataatctggatccaaccatatccctaaat
gaccccagcgatattgacacggctctgctcaatgacattgatgacatgctgcagctcatc
aacaaccaggacatggtggagttcaaccaggacatggcgggtctctttgacccccctcag
ttcacaggggtcacccctacccaggacctccctgccctcagcctgccccactccaccacc
tcccctccatccaccacctcctcaatcctgagcagcagcccccaccttgatgctctcctg
gggccccccatcatccgcagttcctcccccccagacaaggccttccacccccccaccttc
cagcagtcacccctggcccaagtcaccacctccacccctgtaccactacctaggccgcag
ccagctccccagcagggctctccatcagcccaggctgctcagggtctcagggagtccaag
gtggacctgcccctgccggtcctctcccccccagcccctgttccagtccagcttcctccc
ccagcctcttccccccatactgtacccggccagagccccgtgttcagcgccgccccccaa
gccctgttcacctctcctgccccccagcagtcccaggcccacacccagcagatacggatt
aactacagcacccacaatggctacaaagctgtcaatcatcaaggaggccccgcccagccc
atggtcagcctgtcgtcgtccccttccggtgttcagccaatgaccatccaggctctgacc
actacggcccccctcctgaccacctcagcaagccccccagctcagaccatcgcatcacat
cacattcaacaagtattgctccagccccagtttatcaaggctgagtctctgctgcttacc
accctgaaccgtgacccctgtatggtcactactgtggcctctccatgcatcacctccctg
gccaccaccacatcccagagcacccactcactgcaggctctgatgagtggtggcaccttc
ctgaccacagtgccagtgatgatggactctgacaagctgcccatcaaccgtatcacaatc
agcagtaaacctatgggcctaccccccaagggcgagaagcgcaccgcccacaacgccatc
gagaagcgctaccgctcatccatcaacgacaagatccttgagcttaaagacctggtggcc
gggactgaggccaagcagctcaacaagtcagcaattctgaagaaggcaatagactacatc
cgctacctgcagcagtccaaccagaaactgaaaaaagagaacatggccctgaagatgtct
gcccagaagaacaagtctctgaaggacctggttgccatggaggtggatggcccacagacg
gacgtaaagagcgagctacccaccccgccgccatccgacgtgggctctcccacctcctac
tcccactgtggcagcgactcagaacccgacagccccatgggggaggacagcaagccagcg
gtcaatctgatggacacgtcctcatccactccgggcagtgctggcatgctggaccgctcc
cgcatggcgctgtgcacattcaccttcctcttcctctccctcaatcccctggctgccatg
ctgtgtggagggatgggctccagcaccaccgctaacaaccaagcagtgcatcctgggaca
ggcaggatcatgctgggcctagacaacgcagctgactcgtggggctggatggactgggtg
ctacccactctgttggtttggctgctgaatggtgtgctggtggctggggttctggtccga
gtgttggtctatggagagccagtcaccaggccccactctggatcctccgtgctgttctgg
aggcaccgcaagcaggcagacctcgacctggcacggggagactttgcccaggccagtcag
aacctatggacctgcctcaaggccctgggtcgccccttacccacctctcagttggacctg
gcctgtgccgccctgtgggccctgctccgcctctgcctccagcgactaggggtgggtcgc
tggttggctgccagggctggggggctccgcgccagggggctccgggaggatgctcgcatg
agcagccgcgacgctgccctggtctaccaccgcctgcaccagctgcacatgaccggcaag
ctgggcggtagccacctgtctgcggttcacatggctctgagtgctgtaaacctggccgag
tgttcaggctcctgtctccccgtggccacgctaggagagatctacgtctctgcagctcta
cgagtcaaagccagtctacccagactccttcacttctcctcccgtgtgttcctgagcagt
gcccgccaggcgtgtctctcctccagtggcagtgtccccccggccatgcagtggctctgt
caccctctgggccaccgcttctttgtggacggggactgggccgtccgcagcacccccaaa
gatagcatctacagccaggcagggaacacagtggaccctctggcccaggtgacccaggcc
tttagggaacaccttttggagaaggctctatactgtgtggcccagccccagggggagaag
acccccagtgatggagaaggggagtatgcggatgctctggagtaccttcagctgttgact
agtgcatcagacgccgccggagccaacacccagtccttcgccatcggatccaacatggcc
accgtcactggctgtgaccttcattccaaatggtggtcgtcggttgccgtggtgatcatt
aactggctccaaggagacgacgcagcggctgagagactgtaccccgccgccgagcacctg
ccccgtagtctacagactgcagagagtccgttgcccaaggcgtctttgaacacgttccga
gcggtgcgcgccatgctgaccaaaccagagaactgtcagctgagtctgagccacagtgag
agggccagcggcctgctgagagacagcctcaacctgggaccacactgtcacagcagcagc
ctagacaaggtggtccagttgctgctgtgtgacctgctgctggtgatgcggactaacgtg
tggcgtctgcagcagagctccagtcccgggggtctctccttgcaggcctccccggccgag
ctgcacggcttccagcaggacctctcctccctcaggaagctggcccagagcttcaggccc
gccatgcgcaggttgtttcttcatgaggcaaccgccaggctgatggctggggccagtccc
acacgaacacatcagctcctggaccgctcgctcagacgcagagccacccccggagccaag
acggaggagtgtgagatgcgtcctggccagagggagcaggctgaggcggtgatgttggcg
tgtcgctacctgcccccctccttcctgtcggcaccgggccagcgggtgggcatgctggcg
gacgcagcgcggacactggagaagctgggggacaagcgcaccctccacgactgccagcag
atgatcattaagctgggcagcggcaccactgtcacctctgcctag
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integrated database retrieval system
