Oncorhynchus mykiss (rainbow trout): 110538043
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Entry
110538043 CDS
T07259
Name
(RefSeq) interferon a3 isoform X1
KO
K05414
interferon alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060
Cytokine-cytokine receptor interaction
omy04217
Necroptosis
omy04620
Toll-like receptor signaling pathway
omy04621
NOD-like receptor signaling pathway
omy04622
RIG-I-like receptor signaling pathway
omy04623
Cytosolic DNA-sensing pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110538043
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
110538043
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110538043
04621 NOD-like receptor signaling pathway
110538043
04622 RIG-I-like receptor signaling pathway
110538043
04623 Cytosolic DNA-sensing pathway
110538043
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110538043
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
110538043
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Interferons
110538043
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Exo84_C
DUF4635
Motif
Other DBs
NCBI-GeneID:
110538043
NCBI-ProteinID:
XP_021480275
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Position
12:65755903..65760060
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AA seq
175 aa
AA seq
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MYTMQSWSCIFLIICSMQSVCHCCDWIRHHYGHLSAEYLSLLDQMGGDITKQNAPVLFPT
SLYRHIDDAEFEDKVIFLKETIYQITKLFDGNMKSVTWDKKNLDDFLNILERQLENLNSC
VSPAMKPERRLKRYFKKLNSKVLRKMNYSAQAWELIRKEMKRHLQRLDILAAQMY
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtatacaatgcagagctggagttgtatttttcttattatttgcagtatgcagagcgtg
tgtcattgctgtgactggatccgacaccactacggtcacttgagcgcagaatacctttcc
ctgctggaccagatgggaggagatatcacaaaacagaatgccccagtccttttcccaaca
tcactttacagacacatagatgatgctgagtttgaggacaaagtcatattcctgaaagag
accatctatcaaatcacaaaactgtttgatgggaatatgaaatctgtcacctgggacaag
aaaaacctggacgatttcctcaacattctagaacgccaattggagaaccttaattcctgt
gtatcacctgccatgaaacctgagaggagactgaaacggtacttcaagaagttgaatagt
aaggttctgagaaaaatgaactacagtgcacaggcgtgggagctcatcaggaaagagatg
aaacgtcatctgcaaagattggatatccttgcagcacagatgtactga
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