KEGG   Oncorhynchus mykiss (rainbow trout): 110538043
Entry
110538043         CDS       T07259                                 
Name
(RefSeq) interferon a3 isoform X1
  KO
K05414  interferon alpha
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060  Cytokine-cytokine receptor interaction
omy04217  Necroptosis
omy04620  Toll-like receptor signaling pathway
omy04621  NOD-like receptor signaling pathway
omy04622  RIG-I-like receptor signaling pathway
omy04623  Cytosolic DNA-sensing pathway
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110538043
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    110538043
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    110538043
   04621 NOD-like receptor signaling pathway
    110538043
   04622 RIG-I-like receptor signaling pathway
    110538043
   04623 Cytosolic DNA-sensing pathway
    110538043
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110538043
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:omy04052]
    110538043
Cytokines and neuropeptides [BR:omy04052]
 Cytokines
  Interferons
   110538043
SSDB
Motif
Pfam: Interferon Exo84_C DUF4635
Other DBs
NCBI-GeneID: 110538043
NCBI-ProteinID: XP_021480275
LinkDB
Position
12:65755903..65760060
AA seq 175 aa
MYTMQSWSCIFLIICSMQSVCHCCDWIRHHYGHLSAEYLSLLDQMGGDITKQNAPVLFPT
SLYRHIDDAEFEDKVIFLKETIYQITKLFDGNMKSVTWDKKNLDDFLNILERQLENLNSC
VSPAMKPERRLKRYFKKLNSKVLRKMNYSAQAWELIRKEMKRHLQRLDILAAQMY
NT seq 528 nt   +upstreamnt  +downstreamnt
atgtatacaatgcagagctggagttgtatttttcttattatttgcagtatgcagagcgtg
tgtcattgctgtgactggatccgacaccactacggtcacttgagcgcagaatacctttcc
ctgctggaccagatgggaggagatatcacaaaacagaatgccccagtccttttcccaaca
tcactttacagacacatagatgatgctgagtttgaggacaaagtcatattcctgaaagag
accatctatcaaatcacaaaactgtttgatgggaatatgaaatctgtcacctgggacaag
aaaaacctggacgatttcctcaacattctagaacgccaattggagaaccttaattcctgt
gtatcacctgccatgaaacctgagaggagactgaaacggtacttcaagaagttgaatagt
aaggttctgagaaaaatgaactacagtgcacaggcgtgggagctcatcaggaaagagatg
aaacgtcatctgcaaagattggatatccttgcagcacagatgtactga

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