Oncorhynchus mykiss (rainbow trout): 110538051
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Entry
110538051 CDS
T07259
Symbol
ifnphi1
Name
(RefSeq) interferon a3
KO
K05414
interferon alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060
Cytokine-cytokine receptor interaction
omy04217
Necroptosis
omy04620
Toll-like receptor signaling pathway
omy04621
NOD-like receptor signaling pathway
omy04622
RIG-I-like receptor signaling pathway
omy04623
Cytosolic DNA-sensing pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110538051 (ifnphi1)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
110538051 (ifnphi1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110538051 (ifnphi1)
04621 NOD-like receptor signaling pathway
110538051 (ifnphi1)
04622 RIG-I-like receptor signaling pathway
110538051 (ifnphi1)
04623 Cytosolic DNA-sensing pathway
110538051 (ifnphi1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110538051 (ifnphi1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
110538051 (ifnphi1)
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Interferons
110538051 (ifnphi1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Exo84_C
Motif
Other DBs
NCBI-GeneID:
110538051
NCBI-ProteinID:
XP_021480287
Ensembl:
ENSOMYG00000042467
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All DBs
Position
12:65675000..65676578
Genome browser
AA seq
175 aa
AA seq
DB search
MFTIGSWTCIFLIICSMQSVCHCCDWSRHHYGHLSAECLSLLDQMGGDITEQEAPVFFPE
SLYRRIDDAKFEDQVRFRNETIYQITKLFDGNMKAVTWDKKKLDNFLNILERQFENLKSC
VSPAKKPERRLKRYFKKLNRKVLRKMNYSAQAWELIRKETKHHLQRLDIFKAKMH
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaatagggagctggacgtgtatttttcttattatttgcagtatgcagagcgtg
tgtcattgctgtgactggagccgacaccactacggtcacttgagcgcagaatgcctttcc
ctgctggaccagatgggaggagacatcacagagcaggaggcccctgtttttttccccgaa
tcactataccgacgcatagatgacgccaagtttgaggaccaagtcagattccggaacgag
accatctatcaaatcacaaaactgtttgatgggaatatgaaggctgtcacctgggacaag
aaaaagctggacaatttcctcaacattctcgaacgccagtttgagaaccttaaatcctgt
gtatcacctgccaagaaacctgagaggagactgaaacgctacttcaagaagttgaatagg
aaggttctgagaaaaatgaactacagtgcgcaggcgtgggagctcatcaggaaagagacg
aaacatcatttgcaaagattggatatttttaaggcaaagatgcactga
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