KEGG   Oncorhynchus mykiss (rainbow trout): 110538051
Entry
110538051         CDS       T07259                                 
Symbol
ifnphi1
Name
(RefSeq) interferon a3
  KO
K05414  interferon alpha
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060  Cytokine-cytokine receptor interaction
omy04217  Necroptosis
omy04620  Toll-like receptor signaling pathway
omy04621  NOD-like receptor signaling pathway
omy04622  RIG-I-like receptor signaling pathway
omy04623  Cytosolic DNA-sensing pathway
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110538051 (ifnphi1)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    110538051 (ifnphi1)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    110538051 (ifnphi1)
   04621 NOD-like receptor signaling pathway
    110538051 (ifnphi1)
   04622 RIG-I-like receptor signaling pathway
    110538051 (ifnphi1)
   04623 Cytosolic DNA-sensing pathway
    110538051 (ifnphi1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110538051 (ifnphi1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:omy04052]
    110538051 (ifnphi1)
Cytokines and neuropeptides [BR:omy04052]
 Cytokines
  Interferons
   110538051 (ifnphi1)
SSDB
Motif
Pfam: Interferon Exo84_C
Other DBs
NCBI-GeneID: 110538051
NCBI-ProteinID: XP_021480287
Ensembl: ENSOMYG00000042467
LinkDB
Position
12:65675000..65676578
AA seq 175 aa
MFTIGSWTCIFLIICSMQSVCHCCDWSRHHYGHLSAECLSLLDQMGGDITEQEAPVFFPE
SLYRRIDDAKFEDQVRFRNETIYQITKLFDGNMKAVTWDKKKLDNFLNILERQFENLKSC
VSPAKKPERRLKRYFKKLNRKVLRKMNYSAQAWELIRKETKHHLQRLDIFKAKMH
NT seq 528 nt   +upstreamnt  +downstreamnt
atgtttacaatagggagctggacgtgtatttttcttattatttgcagtatgcagagcgtg
tgtcattgctgtgactggagccgacaccactacggtcacttgagcgcagaatgcctttcc
ctgctggaccagatgggaggagacatcacagagcaggaggcccctgtttttttccccgaa
tcactataccgacgcatagatgacgccaagtttgaggaccaagtcagattccggaacgag
accatctatcaaatcacaaaactgtttgatgggaatatgaaggctgtcacctgggacaag
aaaaagctggacaatttcctcaacattctcgaacgccagtttgagaaccttaaatcctgt
gtatcacctgccaagaaacctgagaggagactgaaacgctacttcaagaagttgaatagg
aaggttctgagaaaaatgaactacagtgcgcaggcgtgggagctcatcaggaaagagacg
aaacatcatttgcaaagattggatatttttaaggcaaagatgcactga

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