Oncorhynchus mykiss (rainbow trout): 110538053
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Entry
110538053 CDS
T07259
Name
(RefSeq) interferon beta
KO
K05414
interferon alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060
Cytokine-cytokine receptor interaction
omy04217
Necroptosis
omy04620
Toll-like receptor signaling pathway
omy04621
NOD-like receptor signaling pathway
omy04622
RIG-I-like receptor signaling pathway
omy04623
Cytosolic DNA-sensing pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110538053
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
110538053
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110538053
04621 NOD-like receptor signaling pathway
110538053
04622 RIG-I-like receptor signaling pathway
110538053
04623 Cytosolic DNA-sensing pathway
110538053
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110538053
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
110538053
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Interferons
110538053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Motif
Other DBs
NCBI-GeneID:
110538053
NCBI-ProteinID:
XP_021480288
Ensembl:
ENSOMYG00000042411
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All DBs
Position
12:complement(65552292..65553298)
Genome browser
AA seq
187 aa
AA seq
DB search
MALQTVTWMSAFLCVAQVCSMPMPCQLQGQLVRITHNLLRDMGGNFPLECLQENVFVAFP
ATAFSTSGAPQLSSSGAKAIYETLKNIDTLFGADDLPTKWDQRKLENFQNIVYRQIEESK
CMMGSVDTSDYLNRAEGLKTYFGNIAAVLKEKNFSYCAWEVVRKELLYSLQFILEHNSDS
LLWANRT
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcagactgtcacttggatgagcgccttcctctgcgtcgcgcaagtttgctcc
atgcccatgccttgccagctacaaggacagctggtgcgaataacccacaacctactgaga
gacatggggggcaattttcctctggagtgcctgcaggagaatgtcttcgtggcattccca
gccaccgcattttcaacctccggcgcgccacagttgagcagcagtggtgctaaagctatt
tatgagacattgaagaacatcgacacattgtttggagctgacgacctgcctactaagtgg
gaccaacggaagttggagaattttcagaatattgtataccgccagattgaagagagcaaa
tgtatgatgggcagtgtggataccagtgattatctcaacagggcagaaggactgaagacg
tactttgggaacattgcagcagtcctaaaagaaaagaatttcagttactgcgcctgggaa
gtggttcgaaaagagctcctgtacagcctacagttcattctggaacacaactctgatagc
ctgctgtgggccaacagaacatga
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integrated database retrieval system