Oncorhynchus mykiss (rainbow trout): 110538117
Help
Entry
110538117 CDS
T07259
Name
(RefSeq) syntaxin-1B
KO
K08486
syntaxin 1B/2/3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110538117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110538117
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110538117
Membrane trafficking [BR:
omy04131
]
SNARE
Syntaxin (Qa)
Stx-PM
110538117
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
110538117
Exosomal proteins of other body fluids (saliva and urine)
110538117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
GNVR
Dcst2
VBS_C3G9
Spectrin_Anc-1
Lzipper-MIP1
YtxH
YjcZ
MTUS1_CCDC69_CC2
Motif
Other DBs
NCBI-GeneID:
110538117
NCBI-ProteinID:
XP_036794044
Ensembl:
ENSOMYG00000031788
UniProt:
A0A060WK22
LinkDB
All DBs
Position
12:68151328..68203022
Genome browser
AA seq
288 aa
AA seq
DB search
MKDRTQELRSAKDSDDDEEVVQVDRDHFMDEFFEQVEEIRVCIDKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQIDKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DFVERAVSDTKKAVKYQSQARKKKLMIIVCCTILGVVLASTIGGYLGF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcgtacacaagaactacgaagtgctaaggacagcgatgatgatgaagaagtt
gtccaggttgaccgggatcacttcatggatgagttcttcgaacaggtggaagagatccga
gtctgtatagataagctgtcagaagatgtggagcaggtcaagaagcagcatagcgccatc
ctggcagcgcccaaccctgacgaaaagaccaagcaggagttggaggacctcacagctgac
atcaagaagacagccaataaagttcgctcaaaattaaaagcaatcgagcagagcattgag
caggaggaggggctgaacagatcatctgcagacctgcgaattcgtaagacacagcactcg
acgctgtcacgcaagtttgtagaggtgatgaccgagtacaacaccacgcagtccaaatac
agggaccgctgcaaggaccgtatccagagacagctggagatcactgggagaacaaccacc
aacgaggagctggaggatatgctggagagtggcaagcttgccattttcaccgatgatatc
aagatggactctcagatagacaagcaggctctgaatgagattgagacccgacacaccgag
atcatcaagctggagaacagcatccgtgagctgcacgacatgtttgtggacatggccatg
ctggtcgagagtcagggagagatgattgacagaattgagtacaacgtggaacactccgtg
gactttgtggagcgggcggtgtctgacaccaagaaggctgtcaaataccagagccaggct
cgcaagaagaagctcatgatcatcgtctgctgtactattttgggagtcgtcttggcatcc
actatcggcggatacctgggcttttaa
DBGET
integrated database retrieval system