KEGG   Oncorhynchus mykiss (rainbow trout): 110538117
Entry
110538117         CDS       T07259                                 
Name
(RefSeq) syntaxin-1B
  KO
K08486  syntaxin 1B/2/3
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    110538117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110538117
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110538117
Membrane trafficking [BR:omy04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    110538117
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   110538117
  Exosomal proteins of other body fluids (saliva and urine)
   110538117
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 AAA_13 GNVR Dcst2 VBS_C3G9 Spectrin_Anc-1 Lzipper-MIP1 YtxH YjcZ MTUS1_CCDC69_CC2
Other DBs
NCBI-GeneID: 110538117
NCBI-ProteinID: XP_036794044
Ensembl: ENSOMYG00000031788
UniProt: A0A060WK22
LinkDB
Position
12:68151328..68203022
AA seq 288 aa
MKDRTQELRSAKDSDDDEEVVQVDRDHFMDEFFEQVEEIRVCIDKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQIDKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DFVERAVSDTKKAVKYQSQARKKKLMIIVCCTILGVVLASTIGGYLGF
NT seq 867 nt   +upstreamnt  +downstreamnt
atgaaggatcgtacacaagaactacgaagtgctaaggacagcgatgatgatgaagaagtt
gtccaggttgaccgggatcacttcatggatgagttcttcgaacaggtggaagagatccga
gtctgtatagataagctgtcagaagatgtggagcaggtcaagaagcagcatagcgccatc
ctggcagcgcccaaccctgacgaaaagaccaagcaggagttggaggacctcacagctgac
atcaagaagacagccaataaagttcgctcaaaattaaaagcaatcgagcagagcattgag
caggaggaggggctgaacagatcatctgcagacctgcgaattcgtaagacacagcactcg
acgctgtcacgcaagtttgtagaggtgatgaccgagtacaacaccacgcagtccaaatac
agggaccgctgcaaggaccgtatccagagacagctggagatcactgggagaacaaccacc
aacgaggagctggaggatatgctggagagtggcaagcttgccattttcaccgatgatatc
aagatggactctcagatagacaagcaggctctgaatgagattgagacccgacacaccgag
atcatcaagctggagaacagcatccgtgagctgcacgacatgtttgtggacatggccatg
ctggtcgagagtcagggagagatgattgacagaattgagtacaacgtggaacactccgtg
gactttgtggagcgggcggtgtctgacaccaagaaggctgtcaaataccagagccaggct
cgcaagaagaagctcatgatcatcgtctgctgtactattttgggagtcgtcttggcatcc
actatcggcggatacctgggcttttaa

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