Oncorhynchus mykiss (rainbow trout): 110538174
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Entry
110538174 CDS
T07259
Symbol
si:dkey-208k4.2
Name
(RefSeq) P43 5S RNA-binding protein
KO
K09191
general transcription factor IIIA
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110538174 (si:dkey-208k4.2)
03021 Transcription machinery [BR:
omy03021
]
110538174 (si:dkey-208k4.2)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110538174 (si:dkey-208k4.2)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
110538174 (si:dkey-208k4.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
TFIIIA_zf-C2H2
zf-C2H2_6
zf_C2H2_ZNF292
Phage_zn_bind_2
zf-met
zf-C2H2_jaz
Ta0938
Zap1_zf1
DUF8760
Motif
Other DBs
NCBI-GeneID:
110538174
NCBI-ProteinID:
XP_021480485
Ensembl:
ENSOMYG00000006282
LinkDB
All DBs
Position
12:complement(69899304..69903006)
Genome browser
AA seq
385 aa
AA seq
DB search
MNGVAHKQDSDPRQQLFNCNHADCGATFQREWRLKEHETVHTGAQPFQCNVADCGRRFSR
KSHLSRHALGHTGVKQFRCTFVGCTKAFFNADKLKRHVHYAHGEKDKYFKCNFPNCLLTF
KKRRVYKLHSKEHGISFNFKCSKRGCGVTFDTHVARKAHEKKHAGYRCTQTECNHFEQTW
GKMHKHMAKHPATFTCKLCQKVFKHVDSLRRHKRTHALQKPVLLCPSSGCKAYFSTTFNL
QHHIRKAHLQLLKYHCCFPDCPRTFAMRESLSRHLAHHDPDANPEKKKRKRPKKAWQKRL
EGHQLPLVEDDLRRLFALRMRVSRRAKVEVNLSGLFNERKIPHFVDSEVNLRDLFSIKPP
HPSCPAERVPAEVTHPEVTDQRLNL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggtagcccacaaacaggactcggatcctcgacaacagcttttcaactgcaac
catgctgattgtggggcgacgttccaacgggagtggcgtttgaaagagcacgagaccgtg
cacacgggagcgcaaccttttcaatgcaacgtggctgattgtggccgtcgtttctcacgg
aaatctcacctgagccgccacgcacttggccacaccggggtgaaacaattcagatgtacc
tttgtgggttgcacaaaggcattcttcaacgcggacaagttgaagagacatgtccattat
gcccacggagaaaaggacaagtactttaagtgcaattttccaaattgcttattgacattc
aagaaacggagggtgtataaattacattcgaaggagcatggaatatcttttaatttcaaa
tgttcaaagagaggatgtggagtcacgtttgacacgcatgtcgctcgcaaagcccatgag
aagaaacatgcagggtaccgctgcacacagactgaatgcaatcattttgaacaaacctgg
gggaaaatgcacaaacacatggctaaacacccagccacattcacctgtaagctgtgccag
aaggtgtttaagcatgtcgactctctgcgtagacacaagcgaacccacgccctgcagaag
cctgtcctgctgtgccccagcagtggctgcaaggcctacttctccactaccttcaacctg
cagcaccacatccgcaaggcccacctgcagctcctcaagtaccattgctgcttccccgat
tgccccagaacctttgccatgcgggagagcctaagcagacacctggctcaccatgaccca
gatgccaaccctgagaagaagaagcgcaagcggcccaagaaggcctggcagaagcgtctg
gaaggccaccagctgcccctggtggaggatgacctgcggcgcctctttgccttgcgcatg
agggtgtcacgacgggccaaggttgaggttaacctctcaggcctcttcaacgagcgcaag
atcccccactttgtcgactctgaggtcaacctgcgtgacctcttcagcatcaagccccct
cacccctcctgccctgcagagcgagtccctgcggaggtcacccacccagaggtcactgat
caaaggttgaacttgtag
DBGET
integrated database retrieval system