Oncorhynchus mykiss (rainbow trout): 110538328
Help
Entry
110538328 CDS
T07259
Name
(RefSeq) transcription factor 20 isoform X1
KO
K24769
transcription factor 20
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110538328
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
110538328
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
PHD_NSD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
110538328
NCBI-ProteinID:
XP_021480752
LinkDB
All DBs
Position
12:76302104..76327286
Genome browser
AA seq
2549 aa
AA seq
DB search
MQNFPNSPAPPALPPGFTSRGGVGSSYPPPSTDPQISPRMTDDYTGMQQQTPPNPQSHSR
HLLHRGHHHPSQAGHMLAYDARNRAGESSHGNIHSGSSSNPYQKETMDYYFAMGGKDRHR
RGGMAYGAGFGYSNMDGHIPQQYRQAGTSSSGMMSPYPLDYGSTAGSGGSSSGSSGAGAF
SPSHQYKMGQNLAMQPASGPQIQHRQHGQNYPTHQALQHGQQHRTYPISGHRMPPQFSHY
SPQGSASTGSSGMYSSPPQRYHDGASSGGGFEPKVNNSPNMNSNSNSISSSATTNNVGSL
ENVAKSYHSSSYPSYSPQTHPLHKQATLQHRNSQHNLGIGYDNSLKMQHHAPPPGPVYSK
HHQSTNPGMPQQPCQEIAKSPMHSQPQQGQINQNFSPISNPSPAASAVQSPSCSSSPSPL
MGVSEGHGNPLCPPHVPSHPPPPNPRSCRGRLLQTMPQLSPTPNSNSSISSCGSSGSIKA
TGLNTSAGGGHLVSNRSRMAAGTGKGSHEEGSSSSVYSSSPLDKLMQDPGLNSLNALTSQ
VANLPNTVQHMLLTDTLMSHRRGKDGQSQMLQALQAIPSTQPRSRSVSAASSSGIGGGEG
ASSEAGGDDDSFLVSERVSSRAKEERDEQISEGGESRMRQMSGTSSGSEPTGYYPPPSQS
QMSMGSSKNQSHTGKSDQGSQGKRMLTESSTKQSLNQSDVSERKTTETRTPSLSSPSSAP
QSAEPGPSVHSRPPVSSTPSCPIPSPAPQFHPNCATDVNTKNGLRKTREIKYEGIKDESG
GMVEKNEKGTHGEQTREGHMRQDGQDKENKLDRSSLRNKKSDEKDGKRCKTRDLDNSNQD
QNIEEQTNAGGVGVIVSTRCEVNHPEKATCAQDNCIEEKHSDSFFRESSRHNGEEGMDLS
VYSSHHEVPQKSNFGRSVPQNHPLSGPQKYGYQESPHGAAMGLKNRGRPSPGSVTGSNSR
YQGFHQPKPSYAPEHTKDVAGTTVEGSVRRREGSGARGHDDNSQLQHPFPSLLQEVLQGY
HLDRRYGRSEQALTAHLQAQNMTRQQYQTRHPYGMAESMRTQTGVGEVTSHPSRMTSPGK
PLQLNQRQGPGSDFVPESPQSSLRSEGVDTKGSHSASSEKNKMATPQRHLTHMPQSTEFL
SGPPPKHINLADYSLPHRKPPSGLPSSSSAVQELLLQETEPLAGSVGTIGQIESQMLTSS
LLPPSKERRSVICDVCPNRRSTPERDGKREREREKSPIGASVIQLPSTNDLGNSKEMGDK
KEVGVKVASKETAEAVHHSGLTTKETDVEHHNKALHPSVVMNSEPLRRGKIDLTTTMPSQ
HLQQTSHYPSTTNPLSPPSRHQSYPHGVDLSTGHASGFPGSRFGDAREGNMMPRNPHFHN
PYHSPQVQLQNPQSANKLQMYTHLHAHDLDDRLNWVATINRPTKDMMQSSTSPGRHKLSH
SEQRQRMQSPTDILHNRQMFAKQQVPHQNTYYDMKMWESTHSGRESVGMLEGDPYQRSQQ
PPPAAPLGSVAHQLVPTAPPVSNILESPVSQVVTEEIFKSLHPTPTPNSMKTVGPSIGGN
VNSVMPQSHRPNKTGGSGDTNPLMLRRRVRSFISPIPAKRQHQDVSQQRSAPSSYHSPLA
YSESSLQNDDDSSSSDITTLGSPNTPCPTPGQSTYSQSSSPVQGKKSLPPRKGRGLKLEA
IVQKITPNVKKSTNSGHTDVDSNDFTGFSHTEMSQFTDTQDEEECLPYLDESLSLSDIMP
YRGVDETGPLPPTAYPCDPHQTSQVLKCGTTGTVTRPLQPDFDFGLGTAASSTGDRDKEI
PADYTLLGPLPPPPPLPCPVQGSPPPSSSALSDIQHFTNTYQQLETRRGEQSAANLLRQK
LEETGIGFDDYSSSDYYGTTPPHHSQAQGHLLRQPHQTSPRSSLAMTGSPQDSKQSDNSV
PKGYFPSGKKKGRPVGSVNKQKRAQATQAQAQNVSPSALSGPPIQSPATVSPQVAPSPST
TASAPSVTPPTDQKMTPPEIPPVLTQAVKVDAESEDTQPETEVKSVCQKQEGVKDESEVV
GSRGRQRRRRRGVAAAAAKDDLEAATRAGGHFDNSRVFPDNSKCAFAPYIHVERKVAEIG
AVCTIVNGEEEKMKGERGAVGGKASSSGIEALLTSALLSQLPRRDGEIERVKEKRELEDV
DSALQAGKALPSSEYLLPGPVITESIHSGRLLCCLCQKWANYKNLGDLYGPYYPPEYATR
LPKNQPQIRQSLVITGMSRNVQNLDTISNVLTTQGCELQDVPTIKSSTYSDYMFNQETNT
TSPATAVGTASPAGGGEMLYLASKLAKTTTNKTTVLKWNMPPELKPITELRKQPELQNEP
TYSQQNQPCQQQQTGDTQQRPQHRKLTSHPRFKRRQKSSENSPRMVPSNSKASLPFQPPP
PTLDSLGPLAQLAQLPQMPIDPEELWVHEACMVWTSGVYLVNGRLYGLQEALDGARDTVC
SYCEMVGSTLGCYSKGCTLRYHYPCAMDADCSLNEDNFSLRCPKHKVKRESFPRAASQLN
LCTLSSLREAERDTEEEEMQEYRIGMLGQ
NT seq
7650 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatttccccaacagtccagcacctccagctcttcctcctggatttactagtagg
ggtggagttggctcctcttacccaccaccgtcaacagatccccagatatccccaaggatg
accgatgactacactgggatgcaacaacaaacccctccaaaccctcaaagtcacagtcga
cacctactccatcgagggcaccaccaccctagtcaggctggccatatgcttgcttatgat
gcaagaaacagagctggggaatcatcacacggtaatattcacagtggcagtagtagcaac
ccttaccaaaaggaaacgatggattattattttgcaatgggtggaaaggacagacataga
agaggaggtatggcatatggggcaggttttgggtactcaaatatggatggacatatacct
cagcagtacagacaagctggaactagctcctccgggatgatgtctccctatcctttggac
tatggttcaacggccggctcaggtggtagtagcagtggcagcagtggtgctggagcattt
tccccctcccatcagtacaaaatgggtcagaaccttgcaatgcagccagcatcagggcct
cagatacagcaccgccaacatggacagaattaccccacccatcaagctctgcaacatgga
cagcagcataggacttatcccatctctggacacagaatgcctccacagttctcacactac
tccccacagggtagtgcatccacagggtcatcaggaatgtacagctccccaccacagaga
tatcatgatggggccagcagtggtggtggatttgaacctaaagtcaacaactctcctaat
atgaactctaattcaaactcaatttcaagttcagctacaacaaacaatgttggatcactg
gagaatgtagcaaagagttaccactcttcaagttatccctcatactccccacaaacccat
ccactccacaaacaagccacccttcagcaccgcaattctcagcacaatttaggaataggt
tacgacaactctctcaaaatgcagcatcatgcccctccaccaggtcctgtatactctaaa
catcaccaatccaccaatcccggaatgcctcaacaaccgtgtcaagaaatagccaaatcg
ccaatgcattctcaaccccaacagggccagattaaccaaaacttcagccctatatctaac
ccctctccagctgcctctgcagtgcagtctcccagttgtagctcctcaccttccccgttg
atgggtgtctcagaaggtcatggaaaccctttatgtcccccacatgttccatcacatcct
cctcccccaaatcctcgtagttgccgtggtcggttattgcagacgatgcctcagttgagt
cccacacccaactccaacagcagcatcagtagttgtggcagcagtggcagtatcaaagct
actggtctgaatacaagcgctggaggtggtcacttagtctcaaaccgaagcagaatggct
gcaggtacaggaaaaggatcacatgaagaagggtcatcctcgtctgtctattcatcttct
cctcttgacaaactcatgcaagatcctggcttgaacagtctaaatgcgttgacatcacag
gtagcaaatttacccaatacagtgcaacatatgcttctcactgacacattaatgtcacat
agaagggggaaagatggacaaagtcaaatgctgcaggcattacaagccattccttctact
caaccaaggagtcgaagtgtcagtgctgcctcaagcagtgggattggtggtggtgaaggt
gctagctcggaggctggaggtgatgatgattcctttctggtgtccgaaagagtatcatca
agggccaaagaggaacgagatgagcagatttctgaggggggggaatctagaatgcggcag
atgagtggcacaagcagtggatcagaaccaactggctactatcctcctccatctcagagt
caaatgtccatgggttctagtaaaaaccaatcccatactggaaagagtgatcagggttca
caagggaagaggatgttaacggaatcttctacaaaacaatctctgaatcaatcagatgtt
tctgaaagaaagacaactgaaacccggacaccttcattgtcatctccctcctctgctcct
caatctgctgagcctggtccaagcgtacattctcgccctcctgtttcctctactccctca
tgccccattccctctcctgctcctcagttccacccaaactgtgccactgatgttaatact
aaaaatgggcttaggaaaacaagggaaattaaatatgaaggaattaaagatgaaagtgga
gggatggttgaaaaaaatgaaaaaggcacccatggagagcagacccgagagggacacatg
cgacaagatgggcaggacaaagaaaataaattggatcgatcttccttgcgtaacaaaaag
agtgatgagaaggatggaaaacgatgtaagacacgagatttggacaactccaatcaagat
caaaatattgaggaacagacaaatgctggtggagtgggtgttattgtgtcaactcgttgt
gaggtaaatcatccagaaaaagctacatgtgcacaagacaactgcatagaggagaaacat
tcagacagcttctttagagagtctagtcgtcataatggggaggaaggaatggatttgagt
gtatattcctctcatcatgaagttccccagaaatctaacttcggacggtctgtccctcaa
aatcatcccctctcaggtcctcaaaaatatggttatcaagagtcaccacatggtgctgcc
atgggtttgaagaacaggggaagacctagtccagggagtgtaactggatcaaattcaagg
tatcaaggcttccatcagccaaagcccagttatgcccctgaacacaccaaggatgtcgcg
ggtactacagttgagggatcagtgaggagaagagaaggatcaggagcaagaggacatgat
gataattctcaacttcagcatccatttccaagcctcttgcaggaggttctacagggttat
cacttagaccggcgctatgggcgatctgaacaggcactaactgcccatctccaggctcaa
aatatgactcggcaacagtaccaaaccaggcatccgtatggcatggctgaaagtatgaga
acccaaactggagttggagaggtcacttcccacccctcccgaatgacaagccctggaaag
cctcttcaactaaatcagcgccaggggcctggatctgattttgtaccagaatcacctcaa
tcctccttgaggtctgaaggagtagatactaagggatctcacagtgcttcttcagagaaa
aataaaatggcaacaccgcagcgtcacctgacccatatgccacagtctacagagtttttg
tctggacctccaccaaaacacatcaatttagccgactactcgttacctcacaggaaaccc
ccttcaggtctgcccagctcatcttcagctgtacaggaactcctattgcaggaaacagag
ccgctagcgggcagtgttggaaccataggtcaaattgagtctcaaatgttgacgtcctcc
cttttacctccatctaaagagcgccgctctgtcatatgtgatgtttgtcccaatcgccgc
agtacaccagaaagggatgggaaacgggaaagagagcgggaaaaaagtccaattggtgcc
tctgtcatccaacttccatcaacaaatgatctagggaacagtaaggagatgggagataaa
aaagaagttggagtgaaggtagcatcaaaggagactgcagaggctgtccatcatagtggt
cttacaaccaaggaaactgatgttgagcatcataacaaggctttacacccatctgtggtt
atgaattcagagcctcttagaagaggtaagattgatttgaccaccaccatgccctctcaa
catctgcagcaaacctctcactatccctctaccaccaaccctctgtctccaccatcaaga
catcagtcatacccacatggtgtagatttatctacagggcatgccagtggctttcctggt
tccaggtttggtgatgcaagagagggcaatatgatgccacgtaacccccattttcacaat
ccctaccactcaccccaagttcaattacaaaacccacaatccgcaaacaaattacaaatg
tatactcacctccatgctcatgacttggatgacagacttaattgggtagctaccattaat
agacccaccaaggatatgatgcagtccagtacttctccaggtagacataaactcagtcat
tcagagcagagacaaagaatgcagtctccaactgacattttgcacaatcgccaaatgttc
gctaaacagcaagttcctcatcagaacacttactatgacatgaaaatgtgggagtcaaca
cactctggtagagagagtgtggggatgttggagggggatccttaccagagaagtcaacag
ccacctcctgctgctcctcttgggtctgttgcccaccaattggttccaacagctccacca
gtctccaacattcttgaatcacctgtctcccaagtggttacagaagaaatctttaaatca
ctccatccaacacctacacctaattccatgaaaacagttggtcccagtattggtggcaat
gtcaattccgtgatgccacagagccatcgaccaaataaaactgggggttctggggacact
aatccattaatgttgaggaggagagttcgatctttcatttcccctatccctgccaagagg
cagcatcaggatgtatcacagcaaaggagtgcccctagttcatatcactcacctttggcc
tactctgaatccagcctccaaaatgacgatgactcatccagttcagatataactacactt
ggttcgcctaatactccttgtcccacacctggacaaagcacttattcacaatcctcctca
cctgttcagggtaaaaagagtctgcctccaagaaaagggagaggtttgaaactggaggct
attgttcagaaaattacaccaaatgtgaagaaatctactaacagcggccataccgatgtt
gactcaaatgattttactggattttctcacactgaaatgtcacagtttactgacacacag
gacgaagaggaatgtttaccttatctcgatgaaagtctctcattaagtgacattatgccc
tacagaggggttgatgagactggaccgttacctcccaccgcatacccctgtgatcctcac
cagacatcacaagttcttaaatgcggcaccacaggaactgttacaagacctttgcagcca
gactttgactttgggttagggactgcagcatctagtactggtgatagagataaagagata
cccgctgactacaccttgttagggcccttacccccacctccaccactaccttgtccagta
cagggctcccccccaccttcttcatctgccttgtctgatattcaacatttcactaatact
taccagcaacttgagactcgaagaggtgaacaatctgctgctaaccttctgagacaaaaa
cttgaagaaactgggattggatttgatgattacagtagcagtgactattatggaaccacc
ccaccacaccacagtcaggctcaagggcacttactaagacagccacatcaaacttctcca
aggtcatctttggcaatgacagggtcaccacaagattccaaacaatcagacaattctgta
cccaaaggctatttcccatcaggcaagaagaagggaaggcctgttggaagtgtgaataag
caaaaacgtgctcaagccacccaggcccaggcacagaatgtgagcccaagtgctctgtct
ggcccacctattcaatctcctgcaactgttagtccacaggtagccccaagccctagcact
acagcctctgccccatcagtcactcctccgactgatcagaaaatgactcctccggagatt
ccaccagtcttgacccaagcagtaaaagtggatgctgaaagtgaggacactcagccagag
acggaggtgaaatcagtctgccagaaacaagagggggtgaaagacgagagtgaggtagtg
ggatcaagaggcaggcagaggaggagaagaagaggagtagcagcagcggcggccaaagat
gacctggaagcggctacaagagcagggggacattttgataacagcagagtttttcctgat
aatagcaagtgtgcctttgcgccatacatacatgtggagaggaaagtagctgagatagga
gccgtgtgcacaattgtgaatggtgaagaggaaaagatgaagggagagcgtggagcagtt
ggagggaaagcaagcagtagtggtattgaagctcttttgacctcagctcttttgtctcaa
ctgcctaggagagatggagaaattgagagggtcaaagagaagagggaactggaggatgta
gactctgccctccaggcaggaaaggcactaccttcatctgagtaccttctaccaggccct
gtgattactgaatccattcattctggccgtcttctctgctgcctgtgccagaaatgggcc
aattacaaaaaccttggggatctctatggaccttactaccctcctgaatatgctacaagg
cttcccaagaatcaaccccagattcgacagagtcttgtaattactgggatgagtagaaat
gtgcaaaatctcgacaccatttcaaatgtgttgaccacccagggctgtgaactgcaagat
gtgccaactatcaagtcctcaacttatagtgattacatgttcaatcaagagacaaataca
acttcccctgccactgctgttggcactgcctctccagccggtggaggggagatgctttat
ctggccagcaagcttgctaaaaccaccaccaacaagacaacagttcttaagtggaacatg
cctccagagttaaaaccaattactgagctaaggaaacaacctgaacttcagaatgagccc
acttacagtcagcaaaaccaaccatgccagcaacagcagacaggagacactcaacaaagg
ccacaacacagaaagctgacgtcgcacccaagatttaaaaggagacagaaatccagtgag
aattccccaagaatggtgccatccaacagcaaagcctcattgccattccagccccctccc
ccaaccttagactcccttgggcctttggcacagctggcccaacttcctcagatgcctata
gacccagaggagctgtgggtgcatgaggcatgcatggtctggaccagtggggtttacctg
gtcaatggaagactgtatggcctacaggaagcactagatggtgccagagacacagtctgc
tcttattgtgaaatggttggctcaaccctcggctgttacagcaaaggctgcacactgaga
tatcactacccgtgtgccatggatgcagactgctctctgaatgaagataacttttcacta
cgatgtccgaagcataaggtaaaaagggagagtttccccagagcagccagccagctaaat
ctgtgtaccttgagcagtctgagagaggctgagagagacactgaggaggaggagatgcag
gagtataggatcggaatgcttggacaatga
DBGET
integrated database retrieval system
