Oncorhynchus mykiss (rainbow trout): 110538342
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Entry
110538342 CDS
T07259
Name
(RefSeq) sterol regulatory element-binding protein 2 isoform X1
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110538342
04131 Membrane trafficking [BR:
omy04131
]
110538342
Transcription factors [BR:
omy03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
110538342
Membrane trafficking [BR:
omy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
110538342
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
110538342
NCBI-ProteinID:
XP_021480770
Ensembl:
ENSOMYG00000045273
UniProt:
A0A8C7UWJ1
LinkDB
All DBs
Position
12:76030989..76044262
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AA seq
1163 aa
AA seq
DB search
MDSNVSGEYISTMENMDPTLSELGDEFTLGDIDEMLQFVSNQVGDFPDLFEDQMASAGSL
QNGAGATPRPPPQAPQTPQTTTTVYQNSNVTLTPTQTLAPQSLPLTPPQTPVQTFSSGQH
HIRAPPLLQPRPQMQAIQPQPQQQPTIQVHSQSIPMQAHSFPVHTLVQTHNQALPIQTQA
QTVMITSSGGQSRFIQNPVICHQSPTTSFQVLQPQMQSIMTSPQVQPMTIQHQRLLQTGQ
TIQTLSTAPTVHTMQQQVQQVPLLVHQPQILKTENLVLTTLKPDGTQVLSTMQNPGITTL
THPIQTQTLQVPTLMGSNILTTVPVMMGGGDKLPIKQLSSGTSHCVGGNRQVMDHGMGMV
MGPGGVMKEGERRTTHNIIEKRYRSSINDKILELRDLVMGGDAKMHKSGVLRKAIDYIKY
LQQVNHKLRQENLALKMNSKNKSVVLSDDVEMKPEMLMMSPPASESGSGSPREFSPYCID
SEPGSPLLDHEQVKSEPGSPSSVGVMDRSRLLLCALTFFCLSLNPLPSLLGSEAQSSSSL
TSAHGASRTLFSLPSQTQNFATWLWCLLPWLTVWILSGVGAVWGCVRVLYLWEPVTPLHS
PKSVSFWRQRKQADLHLNRGDYTAAVASLKTCLSVLTRALPTTSWDLLFSLSWNLIRYCL
HHPTPLGWLVRQVGGKHKGEESKTSSRDAALVYHRLSQLQLTGKLPQSSGLWALSLSMSA
VNLSESAQSKMAPTQQAHIYVTAATALRTVLGHHLSCLPGYLLSCAEGVASQSDSKPIPD
CLHWLFTPLGRQFFLSCDWSVKSESREGVYTSQRDPADPIAQLHRCFCEKLLERAVHSLI
QPHTDTEADKPKNDSGEFSSALEFLQLLNSCTEESSSPPFPAPPNHTTMPVADPVSRWWA
LVLKAAAHWLQGDDVAVRSLLAEAERMPRALHTLDHPLPKAVLLLCKAVQMSLSPLKGEG
AVACLSHCDRASSYLRTSISVPLSTQSGNWLNKGVELLVCDLLLTLRTSLWQRGSSSNGE
PGPASSSQLAGFQRDLSSLRRLGQCYRQAQHKVFLHETTVRLMAGASPTRTHQLLEHSLR
RRTNTPGYTTAEGDCVLGERERAHAILLACRHLPLPLLTPPGHRARLLAEAKRTLERVGD
RRSLQDCQQILLRLSGGTTIAAS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggacagtaacgttagtggggagtacatctcgaccatggaaaatatggatccgactttg
tcagaactaggggacgaatttacactgggcgacatcgatgagatgctccagttcgtcagc
aaccaggtgggggacttccccgacctctttgaggaccagatggcctctgcgggctcccta
cagaacggtgctggggccaccccacgcccaccccctcaagccccacagacaccccagacc
actaccacagtttaccagaatagcaacgtgaccctcacccccacccaaacactggccccc
cagtccctgcccctcaccccaccacagaccccagtccagacgttctcttcagggcagcat
catatccgcgcccctcccctgctccagccccggccccagatgcaggccatccagcctcag
ccccagcagcaacccaccatccaggtccacagccagagcatccccatgcaggcgcatagc
ttccctgtgcacaccctggtccagacccacaaccaggctctgcccatccagacccaggcc
cagacggtgatgatcacatccagcggtggccagtcccgcttcatccagaaccctgtcatc
tgccaccagagtcccactacaagcttccaagtcctccaaccgcagatgcagagcataatg
acatcaccacaggttcaacccatgaccatccagcaccagagactactgcagacgggccag
accatccagactctctccaccgctcctacagtccacaccatgcaacagcaggttcaacag
gtaccccttctggtccaccagcctcagattctgaagaccgagaatctggttctgaccacc
ctgaaacctgatgggacacaggttctgtccaccatgcagaaccctgggatcaccaccttg
acccatcctatccagacacagactctacaggtaccgactctgatgggcagtaacatcctg
accactgtgcctgtcatgatggggggcggagacaagctgcccatcaaacagctgtcgtca
ggcacctcccactgtgtaggtgggaacaggcaggtgatggaccacgggatgggaatggtg
atgggtccagggggggtgatgaaggagggggagaggagaaccacccacaacatcatcgag
aagaggtaccgctcctccatcaatgacaagatcctggagctgagagacctggtcatgggc
ggcgacgctaagatgcacaagtcaggagtgctgaggaaagccatcgactacatcaaatac
ctgcagcaggtcaaccacaaactacggcaggagaacctggccctcaagatgaacagcaag
aacaagtcagtggtgctgtctgacgatgtggagatgaaaccagagatgctgatgatgtca
cctccagcctcagagtctggatcaggatctcctcgtgagttctctccatactgcatcgac
tccgagcctggcagtcccttactggaccatgagcaggtgaagagtgagcctggctcaccc
tcttctgtaggagtgatggatcgctctcgtctcctcctctgcgccctcaccttcttctgc
ctctccctcaaccccctgccctctctcctgggatctgaggcccagagcagctctagcttg
acctctgcacacggagcctccaggacactgttctcattacccagccagacccagaacttt
gcgacctggctttggtgcctgttgccatggttgacggtgtggattttgagcggtgttggg
gcagtgtggggctgtgttagggtcctctacctctgggagcctgtcacccccctccactcg
cccaaatcagtctccttctggaggcagcgtaaacaagcagacctacatctcaacagaggt
gactatacagcagccgtggccagtttgaaaacctgcctgtcagtcttgaccagagccctg
cccaccaccagttgggacctcctcttctccctctcctggaacctaattcgctactgtctg
catcaccccacccctctgggctggctggttcgccaggttggtgggaagcacaagggggag
gagtccaagaccagctcccgggacgcagctctggtctaccataggctgagccagctgcaa
ctcacagggaagctaccccagagcagtggcctgtgggctctgtctctgtctatgagtgcc
gtcaacctcagtgagagcgcccaaagcaagatggcccccacccagcaggcccatatctat
gtcaccgcggcaacagctttgcgcactgtactgggccaccacctctcctgcctgcctggt
taccttttgagctgtgctgagggtgtggccagccaatcagactccaagcccatccctgac
tgtttgcactggctcttcaccccattgggcaggcagttctttctcagctgtgattggtct
gtgaagtctgagagcagagagggcgtgtacacttcccagagagacccagctgaccccatc
gcccagctgcatcgttgtttctgtgagaagctgctggagagagctgtgcactccctcatc
cagccccacactgacacggaggcagacaagcccaagaacgactcgggggagttctccagt
gccttggagtttctccagctattgaacagctgcacagaggagtcctcctcacctcccttc
ccagccccacctaatcacaccaccatgccagtggcagacccagtgagtcgctggtgggca
ttggtcctaaaggctgctgcccattggctgcaaggagatgatgtcgctgtgaggtcgctg
ctggcagaggcagagcgcatgcccagagctctccataccctcgatcatccgttgcccaag
gctgtgctgctgctgtgtaaggcggtgcagatgagcctgtctcctctgaagggagagggg
gcggtggcctgtctgtctcactgcgacagggccagcagctacctgcgcaccagcatctct
gttcccctgtccacccagtctggcaactggctcaacaagggggtggagctcctggtctgt
gacctcttgctgaccctcaggaccagcctatggcaaagaggaagcagcagcaatggggag
ccaggccccgcctctagctcccaattggcgggattccagcgggacctgagttcgttgcga
aggctgggccaatgctacagacaggcacaacacaaggtgttcctacatgagaccacagtg
aggctgatggctggagccagtcccacccgtacacaccagctactggagcacagcctccga
cgcaggaccaacacccctggatacaccacggctgagggtgactgtgttctgggtgagcgt
gaaagggctcatgccatcctgctggcatgccgccacctacccttacccctgctgacacca
ccagggcaccgcgcccgcctgctggccgaggccaagcgcacccttgagcgtgtgggcgac
cgccgctccctacaggactgccagcagatcctgctccgcctcagcgggggcaccaccatc
gcggcctcctga
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