Oncorhynchus mykiss (rainbow trout): 110538374
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Entry
110538374 CDS
T07259
Name
(RefSeq) ran GTPase-activating protein 1 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110538374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110538374
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110538374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Nop14
Tim54
CDC45
RNA_pol_Rpc4
BUD22
CPSF100_C
Mpp10
SDA1_dom
Motif
Other DBs
NCBI-GeneID:
110538374
NCBI-ProteinID:
XP_021480823
Ensembl:
ENSOMYG00000036705
LinkDB
All DBs
Position
12:complement(75555533..75561122)
Genome browser
AA seq
585 aa
AA seq
DB search
MATDAVAQLADSLAKTQVTEGELSYKGQGRKFDNAQSVEEMVKEIQEFKGLQALRLEGNT
YGVEAAQAIAKALETKSEFKYCYWSDMFTGRLRSEIPPALNSLGAALMTAGARLTVLDLS
DNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGIGGGKILAAALTECYKQSSAQGTPL
GLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHPGVTALATAMQHNPQLRV
LNLNDNTFTKKGAIAMAQALKHLRSIQVINFGDCLVRSEGAIAIAEAVTEGLPILKELNL
SFGEITGEAALLVAQSVEGKATLEKLDLNGNCLGEEGCDDLREVMDGLNMGDLLGSLSDD
EGEPEEEDDDEEEDDDEEEDDDEEEDDEDEEEDDEDEEADEDDVEEEDDSSVNQVSSPPS
VPRSPDAASFLCFPSPDKLLKLGTKRALLFEQQVDVADAGKTAEAFLKISSVYNEEDEQV
KSAVLDSIDAILRKAFASPSFQGYNFVSSLLVMLGLLKSEDKVKPVHVVPGHLQALEYVV
RQDYFPQDHIAVLEAFMSRHIQALESCSSARNILKSTLEHFRPEN
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgatgctgttgcacagttggcagactctctggcaaaaactcaggtgactgag
ggagagttgagttataaaggccaaggacgcaaattcgacaatgcacaatctgtggaagag
atggtgaaagagatccaggagttcaaggggttgcaagcactcaggctggaggggaacact
tatggggtggaggcagcacaggccatcgctaaagccctggagacaaagagtgaatttaag
tactgttactggagtgacatgtttactgggagactgcgttctgagatccctccagccctg
aactccctgggtgcggcgctaatgacagcaggcgccagactgaccgtgctggacctcagt
gacaacgcctttggaccagacggggtgaagggcatcgagaagttgctcaagagcactgcc
tgtcacacactgcaggaactgaggctcaacaactgcggcatgggcattggtggaggcaag
atcttagctgcagcgttgacagagtgctataagcagtccagtgcacagggcacccccctt
gggctgaaggtgttcatcgcaggcagaaaccgtctggagaacgatggggccactgccctt
gcccaggccttccagctgatgggtagtctggaggaggtgcacgtgccccagaatgggatc
aaccaccctggggtgactgctctggccactgccatgcaacacaacccccagctccgggtc
ctcaacctcaacgacaacaccttcaccaagaaaggagctatcgccatggcacaggctctg
aaacatttgcgcagtatccaggtgataaactttggagactgtctggtgcgttccgagggg
gctatagccatcgcagaggcagtcactgaggggcttcccatcctcaaggagctgaatctg
tcatttggggagatcacaggagaagctgcactgctggtggcacaatcagttgagggcaaa
gccacactggagaaactggacctaaatggtaactgcctgggggaggagggctgtgatgat
ctcagagaggtaatggatggcctgaacatgggagacctgctgggatcactcagcgacgat
gaaggggagccggaggaggaggatgatgacgaggaggaggatgatgacgaggaggaggat
gatgacgaggaggaggatgatgaagacgaggaggaggatgatgaagatgaggaggctgat
gaagatgatgtggaggaagaagatgacagcagtgtgaatcaggtttcctctcctccgtca
gtgccccgatccccagatgccgcctccttcctctgcttcccttcccccgacaagctgctc
aaactgggcaccaagagggccctgctctttgaacagcaggtagatgtggctgatgctggt
aagacagcggaggctttcctgaaaatctcctctgtgtacaatgaggaagatgaacaggtt
aagagtgctgtcctagacagtattgatgcaattctcaggaaagccttcgcaagcccctcc
ttccaaggttacaactttgtatcatcgctgttagtaatgctgggactcctcaagagtgag
gacaaggtgaagccggtacatgtggtgcctggtcatttgcaggccctggagtacgtcgtg
cgtcaggactacttcccccaggaccacatcgctgtgctggaggccttcatgtcccgacac
atccaggccctggagtcgtgcagcagcgccaggaacatcctcaagtccacgttggagcat
ttcaggcctgagaactga
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