Oncorhynchus mykiss (rainbow trout): 110538400
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Entry
110538400 CDS
T07259
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110538400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110538400
03036 Chromosome and associated proteins [BR:
omy03036
]
110538400
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110538400
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110538400
PBAF complex
110538400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Sarcoglycan_2
Motif
Other DBs
NCBI-GeneID:
110538400
NCBI-ProteinID:
XP_021480868
Ensembl:
ENSOMYG00000039836
LinkDB
All DBs
Position
12:74770005..74776525
Genome browser
AA seq
437 aa
AA seq
DB search
MSKRPSYAPPPTPAPTTQVPNTPGFVGYNPYSHLAYNNYRLGGNTGSNNRVMNSSGITVP
KPPKPPDKPLMPYMRYSRKVSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTEEEKQDYL
NEYEAEKIEYNDSLKAYHNSPAYLAYINAKNRAEAALEEESRQRQTRVEKGEPYMSIQPA
EDPDDYDDGFSMKHTATARFQRNHRLISDILSEIVVPDVRSVVTTARMQVLKRQVQSLMV
HQRKLEAELLQIEDRHQDKKRRFLETTDSFNSELKRLCGQKVEVDMEKLAAEIAVAEETA
RRRAEEREKEAAEQAEKAAQEQQEQQQAAAASASSTLPITEQNNTTPPTTENKEDQDKST
PMETEETPTSEPSETHPEAEEGTHAAEKQQGPPVESITDEGTSDSTAPSESSTGPPADTP
ASAEPAPEERPASQPSQ
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaggccatcatatgcacctccccccaccccagcccccacaactcaagtgccc
aacacccctgggtttgtggggtacaacccatacagccatctggcctacaacaactacagg
ctgggagggaataccggcagcaacaacagggtaatgaattcctcaggaatcactgttccc
aagccgcccaaaccgccagacaagccgctgatgccctacatgcggtacagccggaaggta
agcaggaaggtctgggaccaagtcaaagcctccaatccggatctgaagttatgggagatt
ggaaagattattggtggcatgtggagggacctcactgaagaggagaagcaggattacttg
aacgaatatgaagcggaaaagattgagtacaacgactccctgaaggcctaccacaactca
ccggcttacctggcctacatcaatgccaagaaccgtgccgaggcggctctggaggaggag
agcagacagcggcagacccgcgttgagaagggagaaccttacatgagcatccagcctgct
gaagacccagatgactatgacgatgggttctccatgaagcacacggccaccgctcgcttc
cagaggaaccaccggctcatcagtgacatcctcagtgagattgtggtgccagatgtgcgc
tctgtcgtcaccactgcacgcatgcaagtcctcaagcgccaggtccagtccctcatggtg
caccagaggaagctggaagcagagctgctgcaaatagaggaccggcaccaggacaagaag
aggagattcctggagacgacagactccttcaacagtgagctcaaacggctgtgcggtcag
aaggtggaggtagacatggagaagctggcagcagagattgctgtggcagaggagactgct
aggcggcgggcggaggagagggagaaggaagcggcggagcaggcagagaaggcggcccag
gaacagcaagagcagcagcaggcagcagcagcctctgcttcatctaccctgcccatcact
gaacagaacaacaccaccccaccaaccacagagaacaaggaggaccaggacaagtcaacc
cctatggagaccgaagagactcctacatcagagccatctgagacccatcctgaggctgag
gagggcacacatgctgcagagaagcagcagggcccgccggtggagagcatcacggacgag
ggcactagtgacagcactgccccatccgagagcagcaccggaccccctgcagacacccct
gcctcagctgaacctgccccagaggaacgcccagccagccagccctcccaataa
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integrated database retrieval system
