Oncorhynchus mykiss (rainbow trout): 110538469
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Entry
110538469 CDS
T07259
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110538469
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110538469
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110538469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110538469
NCBI-ProteinID:
XP_021480981
Ensembl:
ENSOMYG00000020948
UniProt:
A0A8C7R637
LinkDB
All DBs
Position
12:77485338..77492407
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDEEPQGAPETTAPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKAAVFFGGLSIKKDEDVLKKNCPHIVVGTPGRILALIR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDSYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgacgttgacaatgagctgctggactatgaagaggacgaggagcctcag
ggagccccggagactactgccccagcaggcaagaaggaggtgaagggctcctatgtctcc
atccacagctctggcttcagagacttcctgctcaaaccagagctgctccgcgctattgtc
gactgtggctttgagcatccatctgaagttcaacatgagtgcatccctcaggccatcctg
ggcatggacatcctttgccaggccaagtctggtatgggcaaaacggcagtgtttgttctt
gccacactacagcagattgagcctgtggatggacaggtgtcagttctagtaatgtgccac
acacgagagctggccttccagatcagtaaagagtatgagcgtttctccaagtacatgccc
acagtaaaggcagccgtgttcttcgggggcctgtctatcaagaaggatgaggatgtgctg
aagaagaactgccctcacattgtggtgggaacccctggccgaatcctggccctcatccgc
aacaagaccctcaacctaaagaacgtcaagcactttgtcctggatgagtgtgacaagatg
ctggagcagttggacatgaggcgtgacgtacaggacatcttcaggctaacaccacatgag
aagcagtgcatgatgttcagcgccaccctcagcaaggagattcgaccggtctgccgcaag
ttcatgcaggatcccatggaggtgtttgtagatgatgagaccaagctgacgctgcacggt
ctgcagcagtactactgcaagctgaaggacagcgagaagaaccgcaagctctttgacctg
cttgatgtgctggagttcaaccaggtggtgatctttgtcaagtcagtgcagcgctgtgtg
gcgctctctcagctactggtggaacagaacttccctgccattgccatccacaggggcatg
gctcaggaggagaggctgtcccgttaccagcagttcaaggatttccaaaggcggatcttg
gtggccaccaacctgtttggccgagggatggatatcgagcgagtcaatattgtcttcaat
tacgacatgcctgaggactcggacagctacttacacagggtggcccgtgctgggcggttt
ggaaccaagggtctggctgtgacctttgtgtcagacgagaccgatgccaagactttgaat
gacgtgcaggaccgctttgaggtcaatgtggctgagctgccagaagagatcgacatctcc
acttacattgagcagtccagatga
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