Oncorhynchus mykiss (rainbow trout): 110538510
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Entry
110538510 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
omy04137
Mitophagy - animal
omy04144
Endocytosis
omy04340
Hedgehog signaling pathway
omy04350
TGF-beta signaling pathway
omy04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110538510
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110538510
04350 TGF-beta signaling pathway
110538510
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110538510
04137 Mitophagy - animal
110538510
09144 Cellular community - eukaryotes
04520 Adherens junction
110538510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110538510
04121 Ubiquitin system [BR:
omy04121
]
110538510
03029 Mitochondrial biogenesis [BR:
omy03029
]
110538510
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110538510
Membrane trafficking [BR:
omy04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
110538510
Autophagy
Mitophagy
Other mitophagy associated proteins
110538510
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
HECT type E3
110538510
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
110538510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
110538510
NCBI-ProteinID:
XP_021481048
Ensembl:
ENSOMYG00000030503
UniProt:
A0A8C7W4G2
LinkDB
All DBs
Position
12:78421508..78489545
Genome browser
AA seq
827 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDIVKNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDMNKL
GLNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCIVDENTPILSTNGATPTIPCVPSSDQRAQERRVRSQ
RHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLRGFTADTS
GMPSASMLSAHSLQPYCTCGSETPLTQACVFHGLPQAQRRTHINTDLSNVNCEELGPLPP
GWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRSGIEMQNSPISRQIQ
LKEQAQQALVSPGNLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVSREE
IFEESYRQVMKMRPKDLWKRLMVKFKGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSR
DDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDD
MESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKIIQVTQDTKKEY
VRLYVNWRFLRGIEAQFLALQKGFNEVISQHLLKAFDEKELELIVCGLGKIDINDWKSNT
RLKHCTSDTNIVKWFWKAVESYDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIH
QIDASSNNLPKAHTCFNRIDIPPYENYDKLYDKLLTAIEETCGFAVE
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagttcggcgaaatggtccggttaaactgcgtttaacagtcctctgt
gccaaaaacctggtgaagaaagatttctttcgcctccctgatccctttgccaaagtggtg
gtggacggctcaggacaatgtcactccacagacatcgtgaagaacacccttgaccccaag
tggaaccagcactacgacctatatattggcaagtctgactccatcaccatcagtgtgtgg
aaccacaagaagatccataagaagcagggggctggcttcctgggctgtgtacgccttcta
tccaacgccatcaaccgcctcaaagacaccggctatcagagattggacatgaacaagctg
ggcctcaatgacagtgacacagtgaggggtcagatagtggtgagcctgcagtccagagac
aggataggcacaggaggcccagtggtggactgcagccgtctgtttgacaatgacctgcca
gacggctgggaggagcggaggactgcgtctggccgaatccagtacttgaaccacatcaca
cgcaccacacagtgggagaggcctacaaggcctgcatcggagtactccagcccgggccgg
cctctcagctgcatcgtggatgagaacacgcccatcctgagcaccaacggggccacgccc
accattccatgtgtcccgtccagcgaccagcgggcccaggagagacgcgtccgctcccag
agacacaggaactacatgagcaggacacacctccacacacccccagatctgcccgaggga
tacgagcagaggaccacgcagcagggccaggtctacttcctccacacccagacaggagtc
agcacatggcacgaccctcgagtgcccagggatctgagaggattcacagcagacacctct
ggcatgccctctgcctccatgctctcagcacacagccttcagccctactgtacatgtggc
tccgagacgccactcactcaggcatgtgtgtttcatggattaccacaggcccagaggaga
acacacatcaacacagacctgagtaatgtaaactgtgaggagctgggcccactgccccct
ggctgggagatcaggaacacagccaccggccgggtctactttgtggaccataacaaccgc
accacgcagttcacagacccgcgcctctccgccaacctgcatctagtccttaacccaagc
cccaatggttcccgcagcggcatcgaaatgcagaacagtccgatcagccgtcagatccag
ctgaaggagcaggcccagcaggcactggtgtctccaggtaatctgccagaggaggccgag
tgcctcacggtgcccaagtacaagagggacctggtgcagaagctgaagatcctccgccag
gagctgtcccagcagcagccccaggcaggtcactgccgcatagaggtgtcccgcgaggag
atctttgaggagtcttaccgccaggtgatgaagatgaggccgaaggacctgtggaagaga
ctgatggtgaagtttaaaggggaggaggggctggactacggaggagtggccagggagtgg
ctgtatctgctgtcccatgagatgctgaatccgtactacggcctgttccagtactcccgc
gatgacatctacaccctgcagattaaccccgactcggccgtcaacccggagcacctgtcc
tacttccactttgtgggtcgtattatgggcatggcggtgttccacggccactacatagac
gggggcttcaccctgcccttctacaaacagctgctggggaaacccatcaccctggacgac
atggagtcagtggacccagacctccacaacagcctggtctggatcctggacaatgacatc
acaggcgtgttggaccacaccttctgtgtggagcacaatgcctacggggagatcatccag
cacgaactcaaacccaatggcaaaatcatccaggtcacccaggacaccaagaaggagtat
gtcaggctgtatgtgaactggcgtttcctgcgaggcatcgaggctcagttcctggccctg
cagaagggcttcaacgaggtcatctcacagcacctcctcaaggccttcgatgagaaagag
ctggagctcatagtgtgtggcctgggtaagatcgacatcaacgactggaagtccaacacg
cggctgaagcactgcacctctgacaccaacatcgtcaagtggttctggaaggccgtggag
tcgtacgatgaggagcgccgggccaggttgctgcagtttgtcaccggctcctccagggtc
cccctgcaaggcttcaaagccctccaaggtgctgcaggcccacgactcttcaccatccac
cagatcgatgccagctccaacaacctgcccaaagcccacacctgcttcaaccggatcgac
attcctccctacgagaactacgacaagctgtatgacaagctgctcactgctatcgaggag
acgtgtggctttgctgtggagtga
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