KEGG   Oncorhynchus mykiss (rainbow trout): 110538582
Entry
110538582         CDS       T07259                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110538582
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110538582
Spliceosome [BR:omy03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110538582
 Complex B
    110538582
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer Dsh_C Zip RBD_AKAP-17A
Other DBs
NCBI-GeneID: 110538582
NCBI-ProteinID: XP_021481155
Ensembl: ENSOMYG00000010065
UniProt: A0A8C7PEQ9
LinkDB
Position
12:80727500..80735024
AA seq 468 aa
MADFEEFEKQLSENRQEREKERLKKRSGSGSQSRSEKHRSWSKDRGNRSREKRSRSRDRR
SREQRSTSREHKKHSYSPRRTRRKRTCRYWDVPPPGFEHITPLQYKAMQAAGQIPTIALL
ASSAMSGLAVTPTQVPIVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAP
SIPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQP
AFHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGY
AFCEYVDISATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPTAIIETPVTLQVPGLQGL
QNSGLPTEVLCLLNMVMPEELVDDEDYEEILEDISEECCKYGSVRSIEIPRPIEGVEVSG
CGKIFVEYVSAADCLKAMQALTGRKFANRVVVTKYYDPDMYHRQEFSG
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggctgattttgaggaattcgaaaaacagctgagcgaaaaccgacaggagagagagaag
gagagactcaagaagaggagcgggagtgggtctcagagccgcagtgagaaacatcgcagc
tggagcaaagaccggggcaaccggagccgagagaagcgaagccgcagtagagacaggagg
agccgggagcagaggagcacctcgcgggaacacaagaagcacagctattctccacgaaga
acaaggaggaaaaggacctgcagatactgggatgtgcctccccctggctttgaacacatc
acaccattgcagtacaaagctatgcaagcggctgggcagatacccacaatagccctgctg
gcatcatctgccatgagtgggttggcagtaacacccacccaagtgcccatagttggcagt
cagatgactaggcaggctcgacgtctctatgttggcaatattccctttggtgtgacagag
gagtccatggcagaattcttcaatgcccaaatgaggcttgcaggcctatcacaagcccct
agcatccctgtgcttgctgtgcagataaatcaggataaaaactttgcattcctagaattc
cggtctgtcgatgagaccacacaggccatggctttcgatggaatcattttccaaggtcag
tcgttgaagataagacgaccacatgactaccggcccctacctggcatttcagagcaacct
gcttttcatgtcccaggtgtcgtgtccacagtggtaccagactccccacataaactgttt
attggaggcctacccaactatctcaatgatgatcaggtgaaggagctcttgacatcattc
ggaccactcaaagctttcaaccttgtcaaggacagtgccacgtcactttccaaaggttat
gccttttgtgaatatgttgacatcagtgcgactgatcaggcggtggctgggctcaatggc
atgcaactgggtgacaaaaagctcatcgtccagagagcaagtgtgggagccaaaaacgcc
aatccgactgccatcatcgagaccccggtgacgctgcaggtgcctgggctgcagggactt
cagaactctgggctgcccacggaggtgctgtgcctgctcaacatggtgatgcctgaggag
ctggtggatgacgaggactacgaggagatcctggaggacatcagtgaggagtgctgcaag
tacggcagcgtgcgctccatcgagattccccggcctatcgaaggagtggaggtctctggc
tgtggcaagatctttgtggagtacgtttctgctgcagactgtctgaaagccatgcaggcc
ctcactggccgcaagtttgccaacagagtggtggtaaccaaatactatgatccagacatg
tatcacagacaggagttctcagggtag

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