Oncorhynchus mykiss (rainbow trout): 110538611
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Entry
110538611 CDS
T07259
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecule (CAM) interaction
omy04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110538611
04517 IgSF CAM signaling
110538611
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110538611
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
NGL family
110538611
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRR_14
ig
LRR_1
V-set
Ig_2
LRR_NXF1-5
VEGFR1-3_N_Ig-like
LRR_EndoS
LRRNT
Motif
Other DBs
NCBI-GeneID:
110538611
NCBI-ProteinID:
XP_021481211
Ensembl:
ENSOMYG00000016768
UniProt:
A0A8C7QFA9
LinkDB
All DBs
Position
12:complement(81577016..81615577)
Genome browser
AA seq
733 aa
AA seq
DB search
MRITTVTCLPCPSPLLLLLVQLLLRLLLSGPEFVEAASPCPTHCSCSNQASRVICTRQSL
DGVPESISVNTRYLNLQENSIEVIKSDTFKHLRHLEILQLSKNKISQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLVNLRYLNLGMCGLKDIPNLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVKVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTTMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADVGVSYFTTVTVETVEPNEGPTVYAGVMNSHNESYVITPSG
HQWRGGLPTTASSLSAWSLSSSRATRPTFTVPITAETGYSGLDDVMKTTKIIIGCFVAIT
FMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGAGAGGRGSGISGGGTVSRDGG
GGGGVGGGQSLRMHHPEMVNLPNLARQEHLNHYFKAHHFNNNMMGLGMGLNNNNNPSLSP
CSQNQSTPNSCAQGPTSTSGGTPTGGLLPSPVPLPQLGIHSSLKGLMGKGQNPQIEPLLF
KSGSKENVQETQI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgacctgccttccctgcccctctcccctcctcctcctattggtc
cagctgctactgcggctcctcctctctgggccagaatttgtagaggccgcctccccctgc
cccacccattgcagctgctccaatcaggccagtcgagtcatctgtacaagacagagtctg
gatggggtgcctgagagcatatcagtcaacacacgatacctcaacctgcaggagaattca
atagaggttatcaagtcagacaccttcaagcacttgaggcaccttgagatcctgcagctg
tctaagaacaaaatcagtcagattgaggtgggagcattcaatggcctgcccaacctcaat
acgctggagctgttcgacaaccgcctcaccctggtcccctcacaggccttcgagtacctc
agcaagctgcgggagctgtggttacggaacaaccccatcgagacgctgccgggctacgcc
ttccaccgcgtgccctcgctgcgccggctggacctgggagagctcaagaagctggactac
atctcagacgccgccttcgtgggcctggtcaacctgcgctacctgaacctgggcatgtgt
ggtctgaaggacatccccaacctgacggccctggtgcgtctggaggagctggagctgtct
gggaaccgtctggagatcatccggcctggctccttccagggcctggtgtcgctccgtaag
ctgtggctcatgcactcgcaagtgaaggtcatcgagcgcaacgccttcgacgacctgaag
aacctggaggagctcaacctttcccataactccctgcactcgctgccccatgacctcttc
accccactgcaccagctggagcgggtgcacctcaaccacaacccctgggtatgcaactgt
gacgtgctgtggctcagctggtggctgaaggagacggtgcccagtaacactacgtgttgc
gcccgctgccacgctccccccggcctgaagggcaggtacatcggggagctggaccagagc
cacttcacctgctacgctcccgtcatcgtggagccgcccaccgacctcaacgttaccgag
ggcatggctgcagagctgaagtgtcgcacgggcaccaccatgacctcggtcaactggctc
acgcccaacggcaccctgatgacccacggctcctaccgtgtccggatctccgtgctgcac
gatggtacgctcaactttaccaacgtcacgctgagggatacgggtcagtacacctgcatg
gtgaccaattcagctggcaacaccacggcaaccgccgtgcttaatgtcactgccgccgac
gttggcgtcagctacttcactactgtcaccgtggagacggtggagcccaacgagggcccg
acagtctacgcgggcgtcatgaacagccataacgagtcatacgtcattaccccgtctggc
caccagtggaggggggggctccctaccaccgcctcctccctgtcagcctggtccttgtcc
tcatcccgggccacccggcccacctttactgtgcccatcactgccgagacgggctattct
ggcctagatgacgtgatgaagaccaccaagatcatcattggctgctttgtggccattacc
ttcatggcagccgtgatgctggtggtcttctacaagctgaggaagcagcaccagctgcac
aagcaccacggccccgcccgcgccatcgagatcatcaacgtggaggacgagattggcgcc
ggtgccggtggacgcgggagcggcatctcagggggcggcaccgtctctcgggatggaggc
ggagggggaggagtaggaggagggcagagcctgaggatgcatcacccggagatggtcaac
ctgcccaacctggccagacaggagcacctcaaccactacttcaaggcccatcacttcaac
aacaacatgatgggcctgggcatgggcctcaacaacaacaacaacccctccctctcaccc
tgttcccagaaccagagcacccccaactcctgcgcacaggggcccacctccaccagtggt
ggcacccccacgggtggcttgctgccctcccctgtgcccctgccccagctgggcatccac
agctctctgaaggggctcatggggaaaggccagaaccctcagatcgagcctctgctcttc
aagagtggctccaaggagaatgtgcaagagactcagatctga
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