Oncorhynchus mykiss (rainbow trout): 110538621
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Entry
110538621 CDS
T07259
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110538621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110538621
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110538621
04147 Exosome [BR:
omy04147
]
110538621
Membrane trafficking [BR:
omy04131
]
Endocytosis
Phagocytosis
Coronins
110538621
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110538621
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110538621
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40
WD40_4
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
ANAPC4_WD40
Trimer_CC
WDCP
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_HPS5
bZIP_1
DUF7310
BLOC1_2
TSC22
DUF5798
Beta-prop_SPT8
DivIC
SOGA
DUF6779
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
110538621
NCBI-ProteinID:
XP_036794619
Ensembl:
ENSOMYG00000003821
UniProt:
A0A8C7UZC2
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Position
12:complement(81895467..81904353)
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AA seq
456 aa
AA seq
DB search
MSRKVVRASKFRHVFGQGVKADQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFL
VLPLNKTGRIDMSQPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPEGGLVTPL
NDPVVKLEGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVACGEAMVRIDSVHPDLIYS
ACWNRDGSQILTSCKDKTIRVLDPRKGTVIAEKEKTHEGSRPVKAVFVSEGKILSTGFSR
MSERQVALWDPKSFGEPLTLQELDTSSGVLLPFFDPDTGIVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQE
DLYPDTMGPEPSVEANEWFEGKEGQPILISLKDGFATTTKSKEFKVHKSLLKTTSAAMGH
QHDNTGEVHALQKEVKALKETVEELTKRVSKLESKN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaaggtagtcagggccagtaagttccgtcatgtcttcggccagggggtgaag
gctgaccagtgctatgatgacatccgcatctcccagatgacctgggacagcaacttctgc
tctgtcaaccccaagttcgtggccatgattgtggatgccagcggaggaggggccttccta
gtgctgcctctgaacaagacgggtcgtattgacatgtcccagcccacagtctgtggacac
acaggcccagtgctggatattgagttctgtccccacaacgacaacatcattgccagtggt
tcagaggactgcagtgtcatgatttgggagatcccggagggtggcctggtcacgcccttg
aatgaccccgtggtgaagctggaggggcactccaaacgcgtgggcatcctcagttggcac
cccactgcccacaatgtgctcatgagcgcaggctgtgacaacgtggtgatcctgtggaac
gtggcgtgtggagaggccatggtgaggatcgactcggtccaccctgacctcatctacagt
gcctgctggaacagggacggctcccagatcctcacctcctgtaaggacaagaccatacgt
gtgctggacccccgcaagggcacagtcattgccgagaaggagaagacacacgaaggctcc
aggcctgtcaaggctgtgtttgtgtccgaagggaagatcctgagcaccggcttcagtcgc
atgagtgagaggcaggtggcactttgggacccgaagagctttggggagccactcaccctg
caggagttggacaccagcagtggtgtcctattgcccttctttgaccctgacactggcatc
gtctacctctgtggcaagggtgacagcagtatccggtactttgaggtgacggatgaggct
ccctatgttcactacctgtccatgtacagcagtaaggagagtcagaagggcatgggctac
atgcccaagaggggcctggaggtcaacaagtgtgaaatcgccaggttttacaagctccat
gagaggaagtgcgagcccattgtcatgacggtgccccgcaagtctgacctgtttcaggag
gatttgtacccagacaccatgggtccagagccgtctgtggaggccaatgagtggtttgaa
ggcaaagagggccaacctatcctgatctccttgaaggacggttttgcgacaaccaccaaa
tccaaagagttcaaagttcacaaaagtcttctgaagaccacatcagcagccatggggcat
cagcacgataacactggggaggtgcatgccttgcagaaggaggtgaaggctctgaaggaa
acagtagaggagctgaccaagcgcgtgagcaaactggagagcaagaattga
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