KEGG   Oncorhynchus mykiss (rainbow trout): 110538621
Entry
110538621         CDS       T07259                                 
Name
(RefSeq) coronin-1A
  KO
K13882  coronin-1A
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145  Phagosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110538621
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110538621
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:omy04812]
    110538621
   04147 Exosome [BR:omy04147]
    110538621
Membrane trafficking [BR:omy04131]
 Endocytosis
  Phagocytosis
   Coronins
    110538621
Cytoskeleton proteins [BR:omy04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     110538621
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110538621
SSDB
Motif
Pfam: DUF1899 WD40 WD40_4 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd EIF3I Beta-prop_EIPR1 ANAPC4_WD40 Trimer_CC WDCP Beta-prop_EML Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_HPS5 bZIP_1 DUF7310 BLOC1_2 TSC22 DUF5798 Beta-prop_SPT8 DivIC SOGA DUF6779 Seryl_tRNA_N
Other DBs
NCBI-GeneID: 110538621
NCBI-ProteinID: XP_036794619
Ensembl: ENSOMYG00000003821
UniProt: A0A8C7UZC2
LinkDB
Position
12:complement(81895467..81904353)
AA seq 456 aa
MSRKVVRASKFRHVFGQGVKADQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFL
VLPLNKTGRIDMSQPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPEGGLVTPL
NDPVVKLEGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVACGEAMVRIDSVHPDLIYS
ACWNRDGSQILTSCKDKTIRVLDPRKGTVIAEKEKTHEGSRPVKAVFVSEGKILSTGFSR
MSERQVALWDPKSFGEPLTLQELDTSSGVLLPFFDPDTGIVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQE
DLYPDTMGPEPSVEANEWFEGKEGQPILISLKDGFATTTKSKEFKVHKSLLKTTSAAMGH
QHDNTGEVHALQKEVKALKETVEELTKRVSKLESKN
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgtccaggaaggtagtcagggccagtaagttccgtcatgtcttcggccagggggtgaag
gctgaccagtgctatgatgacatccgcatctcccagatgacctgggacagcaacttctgc
tctgtcaaccccaagttcgtggccatgattgtggatgccagcggaggaggggccttccta
gtgctgcctctgaacaagacgggtcgtattgacatgtcccagcccacagtctgtggacac
acaggcccagtgctggatattgagttctgtccccacaacgacaacatcattgccagtggt
tcagaggactgcagtgtcatgatttgggagatcccggagggtggcctggtcacgcccttg
aatgaccccgtggtgaagctggaggggcactccaaacgcgtgggcatcctcagttggcac
cccactgcccacaatgtgctcatgagcgcaggctgtgacaacgtggtgatcctgtggaac
gtggcgtgtggagaggccatggtgaggatcgactcggtccaccctgacctcatctacagt
gcctgctggaacagggacggctcccagatcctcacctcctgtaaggacaagaccatacgt
gtgctggacccccgcaagggcacagtcattgccgagaaggagaagacacacgaaggctcc
aggcctgtcaaggctgtgtttgtgtccgaagggaagatcctgagcaccggcttcagtcgc
atgagtgagaggcaggtggcactttgggacccgaagagctttggggagccactcaccctg
caggagttggacaccagcagtggtgtcctattgcccttctttgaccctgacactggcatc
gtctacctctgtggcaagggtgacagcagtatccggtactttgaggtgacggatgaggct
ccctatgttcactacctgtccatgtacagcagtaaggagagtcagaagggcatgggctac
atgcccaagaggggcctggaggtcaacaagtgtgaaatcgccaggttttacaagctccat
gagaggaagtgcgagcccattgtcatgacggtgccccgcaagtctgacctgtttcaggag
gatttgtacccagacaccatgggtccagagccgtctgtggaggccaatgagtggtttgaa
ggcaaagagggccaacctatcctgatctccttgaaggacggttttgcgacaaccaccaaa
tccaaagagttcaaagttcacaaaagtcttctgaagaccacatcagcagccatggggcat
cagcacgataacactggggaggtgcatgccttgcagaaggaggtgaaggctctgaaggaa
acagtagaggagctgaccaagcgcgtgagcaaactggagagcaagaattga

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