Oncorhynchus mykiss (rainbow trout): 110538640
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Entry
110538640 CDS
T07259
Name
(RefSeq) glial fibrillary acidic protein
KO
K05640
glial fibrillary acidic protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110538640
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110538640
Membrane trafficking [BR:
omy04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
110538640
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
110538640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
ZK652
Myosin_tail_1
DUF7491
TPR_MLP1_2
GAS
DUF1664
TolA_bind_tri
SPC25_N
PMD1-like
T1-F
CENP-F_leu_zip
BLOC1_2
Fib_alpha
CCDC89
GOLM
T4SS_LegC2C7
ANG-1
Motif
Other DBs
NCBI-GeneID:
110538640
NCBI-ProteinID:
XP_021481256
Ensembl:
ENSOMYG00000005249
LinkDB
All DBs
Position
12:complement(82220858..82228178)
Genome browser
AA seq
457 aa
AA seq
DB search
MESQRVLSSYRKRFGPQGAGSVGGGVRLSSLSSSRFSLHGSPRHMTHSSTISRLSLGSAG
GALLLGTPGNRLDFSADSLLKAQYRETRTNEKVEMMGLNDRFASFIEKVRFLEQQNTVLV
TELTQLRGKEPSRLGDIFQEELRELRRQVDGLSAGKARLEIERDNMAADVATLKQRLQDE
MVLRQDAESNLNAFRQDVDEASLNRVQLERKIDALQDEIAFLKKIHEEELRELQEQLMAQ
QVHVDVDVSKPDLTAALRDIRVQYESVASSNIQETEEWYRSKFADLTDAATRNADALRLA
KQEGNEYRRQLQAMTCDVEALRGTNESLEQQLREMEDRFSVETAGYQDMVGHLEEEIQTL
KEGMARHLQEYQDLLNVKLALDIEIATYRKLLEGEESRITVPMQSFSNLQFRETSMDTKF
SPEAHVKRSIIVRTVETRDGEIIKESTAERKEIPDSP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcagagagtcctgtcatcttacaggaagcgtttcgggccccagggggccggc
agcgtgggtgggggcgtgcggctcagcagtctctcctccagccgcttctccctccatggg
agtccccgccacatgacccactccagcaccatttcccgtctctccctggggtcggctgga
ggggccctgctcctggggacccctgggaaccggctggacttctcggctgactcactcctc
aaggcccagtaccgggagacgcgcaccaacgagaaggtggagatgatgggtctgaatgac
cgcttcgccagctttatagagaaggtgcgcttcctggagcagcagaacacggtgctggtg
acggagctgacccaactgagggggaaggagcccagccgtctgggggacatcttccaggag
gagctgagggagctgcgcaggcaggtggacggactcagcgctgggaaggcccggctggag
atagagagggacaacatggctgctgacgtggccacgctcaaacagagactgcaagatgag
atggttcttagacaggatgcagagagcaacttgaacgcctttagacaggatgtggatgag
gcgtctctgaaccgtgtccagttggagaggaagatagacgcactgcaggatgagattgcc
ttcctcaagaagatccacgaggaggagctgcgtgagctgcaggagcagctgatggcccag
caggtccatgtggatgtggacgtgtccaagccagacctgaccgctgctctgagggacatc
cgggtccagtatgagtccgtggcctcctcaaacattcaggagacggaggagtggtaccgc
tccaagtttgccgacttgaccgacgcagctactcggaatgcagacgccttgcgattggcc
aaacaggagggcaacgagtaccgccggcaactccaggccatgacctgtgatgtggaggcg
ctccgtggaacaaacgagtctctggagcagcagctgcgtgagatggaggaccgtttctcc
gtggagacagctggttaccaggatatggtgggtcatctagaggaggagatccagactctg
aaggaggggatggccagacacctgcaggagtaccaggacctgctcaacgtcaaactggcc
ctggacatagagattgctacctacaggaagctgctggagggagaggagagcaggatcact
gttccaatgcagagcttctccaacctgcagttcagagagaccagtatggacactaagttc
tctccagaggcccatgtcaagaggagcatcatagtgcggactgtggagactagagacggg
gagatcattaaggagtctacggctgagaggaaggagattcctgacagtccttaa
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